BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G39640.1 Length=1969 Score E Sequences producing significant alignments: (Bits) Value Ahg490743 jgi|Araly1|490743|fgenesh2_kg.7__176__AT4G39640.1 2948 0.0 Ahg888185 jgi|Araly1|888185|Al_scaffold_0007_171 1857 0.0 Ahg908566 jgi|Araly1|908566|Al_scaffold_0002_1647 507 2e-142 > Ahg490743 jgi|Araly1|490743|fgenesh2_kg.7__176__AT4G39640.1 Length=1914 Score = 2948 bits (1596), Expect = 0.0 Identities = 1803/1903 (95%), Gaps = 14/1903 (1%) Strand=Plus/Plus Query 3 TAATTAAATGACTTGGCCTCAACGTATACATCATAGTTTTATATCTCAT-CTCTACCTTC 61 |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| Sbjct 1 TAATTAAATGACTTGGCCGCAACGTATACATCATAG-TTTATATCTCATCCTCTACCTTC 59 Query 62 CATAG-AAACTCATTTGAAACTTTTGGGCAGAGAGTCTGAACAATCGCTTTGTTGTCGTC 120 ||||| ||||||| ||||||||||||||| ||||||||||||||| ||||||||||| | Sbjct 60 CATAGAAAACTCAATTGAAACTTTTGGGC--AGAGTCTGAACAATCTCTTTGTTGTCGCC 117 Query 121 AAGAACGATACGTCCCTATAAATTAGCAATGTCGCTGGTTCGAACAGTGACGATCGTTCT 180 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 118 AAGAACGAGACGTCCCTATAAATTAGCAATGTCGCTAGTTCGAACAGTGACGATCGTTCT 177 Query 181 TTTTATAATCGCGTTTCTGCAAAACGCTGCGGCTCAGAAAAGACAGCAAAGTATTGTTAA 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 178 TTTTATAATCGCGTTTCTGCAAAACGCTGCGGCTCAGAAAAGACAGCAGAGTATTGTTAA 237 Query 241 GTCTCGCGGTGCGGTTGCGACAGATGATGGACGGTGTTCTGTTATCGGGATGCGTGTTCT 300 ||| |||||||||||||| || |||||||||||||||||||| ||||||||| |||||| Sbjct 238 GTCCCGCGGTGCGGTTGCAACGGATGATGGACGGTGTTCTGTAATCGGGATGAATGTTCT 297 Query 301 TCGTGAAGGAGGAAACGCGATTGATGCGTCTGTGGCTGCTGCTCTGTGTTTGGGCGTTGT 360 |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 298 TCGTGAAGGAGGAAACGCGATTGATGCGTCGGTGGCTGCTGCTCTTTGTTTGGGAGTTGT 357 Query 361 AAGTCCCGCGTCTAGCGGTATAGGCGGTGGAGCGTTTACAGTGGTTAAGATAGCTGGTGG 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 CAGTCCCGCGTCTAGCGGTATAGGCGGTGGAGCGTTTACAGTGGTTAAGATAGCTGGTGG 417 Query 421 GAAAGAAATTGCTTATGATTCTAGAGAAACCGCTCCTCTAAGAGCCACTGAGAATATGTA 480 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 418 GAAAGAAATCGCTTATGATTCTAGAGAAACCGCTCCTTTAAGCGCCACTGAGAATATGTA 477 Query 481 TGGAGGTAATGTTGACCTAAAGAAGAAAGGAGCCTTATCAGTAGGCGTTCCCGGGGAAGT 540 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 478 TGGAGGTAATGTTGAGCTAAAGAAGAAAGGAGCCTTATCAGTAGGCGTTCCTGGGGAAGT 537 Query 541 TGCAGGTCTATTCACGGCTTGGAAACAACATGGGAAGCTACCGTGGAAGCGGTTAGTGAC 600 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 538 CGCAGGTCTATTCACGGCTTGGAAACAACACGGGAAGCTACCGTGGAAGCGGTTAGTGAG 597 Query 601 TCCTGCAGAGAAACTTGCAGAGGGATTCAAGATTTCCAAGTATCTTTATATGCAGATGAA 660 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 598 TCCTGCAGAGAAACTTGCAGAGGGATTCAAGATTTCAAAGTATCTTTATATGCAGATGAA 657 Query 661 CGCGACTAGAAGCGATATCTTAGCAGACAAAGGTCTCTCTGACCTATTTGTTTCAAATGG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 658 TGCGACTAGAAGCGATATCTTAGCAGACAAAGGTCTCTCTGACCTATTTGTTTTAAATGG 717 Query 721 AGAGCTCAAGAAACCAGGGACGATTTGCCATAACCCAAAATTGGCTTTAACCTTGAA-GC 779 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct 718 AGAGCTCAAGAAACCAGGGACGATTTGCCATAACCCAAACTTGGCTTTAACCTT-AAGGC 776 Query 780 TAATTGGAGAGTACGGTCCAAAAGCATTTTACAATGGCACAGTTGGGGTTAACCTAGCGA 839 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 777 TAATTGGAGAGTACGGTCCAAAAGCATTTTACAATGGCACTGTTGGGGTTAACCTAGCGA 836 Query 840 GAGATATCAAAAAATCTGGAGGAATAATAACTTTGAAAGATCTGCAAAGTTATAGAGTTA 899 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 837 GAGATATCCTTAAATCTGGAGGGATAATAACTTTGAAAGATCTGCAAAGTTATAGAGTTA 896 Query 900 AGATTAAAGAACCGTTGTCTGCAGACATTCTTGGATATAGAGTCCTTGGTATGCCTCCTC 959 ||||||| ||||||||| | |||||||||||||||||| |||| |||||||||||||||| Sbjct 897 AGATTAACGAACCGTTGGCCGCAGACATTCTTGGATATCGAGTACTTGGTATGCCTCCTC 956 Query 960 CTTCATCTGGTGGCGCTGCAATGATGCTTGTTTTGAACATTCTTTCTCAATATGGGATTC 1019 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 957 CTTCATCCGGTGGCGCTGCAATGATGCTTGTTTTGAACATTCTTTCCCAATATGGGATTC 1016 Query 1020 CATCAGGTGTTTCAGGCCCTCTCGGTGTTCATCGACTAATCGAGGCTCTGAAACATGCAT 1079 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1017 CATCAGGTGTTTCAGGCCCTCTCGGTGTTCATCGACTAATCGAAGCTCTGAAACATGCGT 1076 Query 1080 TCGCAGTTAGAATGAACCTCGGGGATCCAGATTTCACTGATGTTACCAAGGTTGTTTCGG 1139 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 1077 TCGCAGTTAGAATGAACCTCGGAGATCCGGATTTCACTGATGTTACCAAGGTTGTTTCGG 1136 Query 1140 ATATGTTGTCGCCAAAGTTTGCAAAAGACTTGAAGAGCAAGATAAACGACCAAAAAACTT 1199 ||||| |||| |||||||||||| ||||||||||||| |||||||| ||| ||||||| | Sbjct 1137 ATATGCTGTCTCCAAAGTTTGCAGAAGACTTGAAGAGAAAGATAAAGGACGAAAAAACCT 1196 Query 1200 TTGATCCAAAATATTACGGGGGCATGTGGAATCAGATCGACGACCACGGGACAAGTCATT 1259 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1197 TTGATCCAAAATATTACGGCGGCATGTGGAATCAGATCGACGACCACGGGACAAGTCATT 1256 Query 1260 TATCGATCATAGACCGCGAGAGGAACGCTGTGTCTATGACTAGTACAATAAATGGTTACT 1319 ||||||||||||| ||||||||||| || || || ||||||||||| |||||||| |||| Sbjct 1257 TATCGATCATAGATCGCGAGAGGAATGCAGTTTCAATGACTAGTACTATAAATGGCTACT 1316 Query 1320 TTGGGGCATTGATGCTATCTCCGAGCACAGGAATAGTTCTGAACAACGAAATGGACGATT 1379 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1317 TTGGGGCATTGATGCTATCTCCTAGCACAGGAATAGTTCTGAACAACGAAATGGACGATT 1376 Query 1380 TCTCAATCCCTATGAAATCTAACGGTAACTTAGATGTTCCACCACCAGCACCAGCTAACT 1439 |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1377 TCTCAATCCCGATGAAATTTAACGGTAACTTAGATGTTCCTCCACCAGCACCAGCTAACT 1436 Query 1440 TCATCCGTCCTGGAAAACGACCTTTGTCCTCTATGTCACCCACCATTGTACTCAAGGACG 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1437 TCATCCGTCCTGGAAAACGACCTTTGTCCTCTATGTCACCCACCATTGTACTCAAGGATG 1496 Query 1500 GTAAAGTGAAAGCCGCTGTGGGTGCGAGCGGAGGAGCCAACATTATTGCCGGGACAACGG 1559 |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct 1497 GTAAAGTGAAAGCCGCGGTGGGAGCGAGCGGAGGAGCCAACATTATTGCTGGGACAACGG 1556 Query 1560 AAGTTTACTTGAATCATTTTTTCCTCAAGATGGATCCTCTTTCTTCCGTCTTAGCTCCAA 1619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1557 AAGTTTACTTGAATCATTTTTTCCTCAAGATGGATCCTCTTTCTTCCGTCTTAGCTCCAA 1616 Query 1620 GAATCTACCATCAGCTGATACCAAACAGAGCT-TCGTACGAGAACTGGACAACAGTATTC 1678 |||||||||||||||||||||||||||||| | |||| ||||| ||||| ||||||||| Sbjct 1617 GAATCTACCATCAGCTGATACCAAACAGAG-TATCGTTTGAGAATTGGACCACAGTATTC 1675 Query 1679 AATGATCATTTCGAGATTCCTAAAGCAACAAGAGTTGTGTTGGAGAAGAAAGGTCATGTC 1738 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1676 AATGATCATTTCGAGATTCCTAAAGCGACAAGAGTTGTGTTGGAGAAGAAAGGTCATGTC 1735 Query 1739 CTATCTCCTATTGCCGGAGGGACGATTGCTCAGTTCATAGTTCAAGAATCCGGTGAGAAC 1798 ||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1736 CTATCGCCCATCGCCGGAGGGACGATTGCTCAGTTCATAGTTCAAGAATCCGGTGGGAAC 1795 Query 1799 TCCGGTGGAAGAAGTGAGCTTGTGGCAGTTAGTGATCCTCGAAAAGGAGGGTTCCCTTCA 1858 ||||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||| ||| Sbjct 1796 TCCGGCGGAAGGAGTGAGCTTGTGGCAGTAAGTGATCCTAGAAAAGGAGGGTTCCCGTCA 1855 Query 1859 GGATATTGAGAATTTTAGATCGAGattt--attttatgttttt 1899 ||||| ||||||| | | ||| | |||| ||||||| ||||| Sbjct 1856 GGATACTGAGAATAT-ATATCAA-ATTTTTATTTTAT-TTTTT 1895 > Ahg888185 jgi|Araly1|888185|Al_scaffold_0007_171 Length=1737 Score = 1857 bits (1005), Expect = 0.0 Identities = 1513/1754 (86%), Gaps = 52/1754 (3%) Strand=Plus/Plus Query 143 TTAGCAATGTC-GCTGGTTCGAACAGTGACGATCGTTCTTTTTATAATCGCGTTTCTGCA 201 ||||||||| | ||| ||||| || | |||| ||| |||| || |||||||||||||||| Sbjct 7 TTAGCAATG-CTGCTTGTTCGTACTGCGACGGTCGCTCTTCTTCTAATCGCGTTTCTGCA 65 Query 202 AAACGCTGCGGCTCAGAAAAGA-CAGCAAAGTATTGTTAAGTCTCGCGGTGCGGTTGCGA 260 ||||||| ||| |||||| | ||||||||||||||| || || |||||||||||||| Sbjct 66 AAACGCTAATGCTGAGAAAA-ATCAGCAAAGTATTGTTGCGTATCACGGTGCGGTTGCGA 124 Query 261 CAGATGATGGACGGTGTTCTGTTATCGGGATGCGTGTTCTTCGTGAAGGAGGAAACGCGA 320 | || ||||| |||||||||| ||||||| | |||||||||| ||||||||||||||| Sbjct 125 CGGACGATGGGCGGTGTTCTGAAATCGGGACGAATGTTCTTCGTCAAGGAGGAAACGCGA 184 Query 321 TTGATGCGTCTGTGGCTGCTGCTCTGTGTTTGGGCGTTGTAAGTCCCGCGTCTAGCGGTA 380 |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 185 TTGATGCGTCGGTGGCTGCTGCTCTTTGTTTGGGCGTTGTCAGTCCCGCGTCTAGCGGTG 244 Query 381 TAGGCGGTGGAGCGTTTACAGTGGTTAAGA-TAGCTGGTGG-GAAAGAAATTGCTTATGA 438 |||||||||||||||||| ||| | || | | ||| ||| | ||||||| |||||||| Sbjct 245 TAGGCGGTGGAGCGTTTATAGTAATCAA-ACTCGCTAATGGCG-AAGAAATAGCTTATGA 302 Query 439 TTCTAGAGAAACCGCTCCTCTAAGAGCCACTGAGAATATGTATGGAGGTAATGTTGACCT 498 |||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||| | Sbjct 303 TTCTAGAGAAACCGCTCCTCTAAGCGCCTCTGAGAATATGTATGGTGGTAATCCTGAGCA 362 Query 499 AAAGAAGAAAGGAGCCTTATCAGTAGGCGTTCCCGGGGAAGTTGCAGGTCTATTCACGGC 558 |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| Sbjct 363 AAAGAAGAAAGGAGCCTTATCAGTAGCCGTTCCCGGGGAAGTCGCTGGTCTATTCACGGC 422 Query 559 TTGGA-AACAACATGGGAAGCTACCGTGGAAGCGGTTAGT-G-ACTCCTGCAGAGAAACT 615 ||||| || |||| |||||| |||| ||||||| |||||| | || || ||||||||||| Sbjct 423 TTGGACAA-AACACGGGAAGTTACCATGGAAGCAGTTAGTGGAAC-CC-GCAGAGAAACT 479 Query 616 TGCA---GAGGGATTCAAGATTTCCAAGTATCTTTATATGCAGATGAACGCGACTAGAAG 672 |||| || || ||| ||||||| || ||||| |||||||||||||||||||||||||| Sbjct 480 TGCAGCTGAAGGTTTCGAGATTTCAAAATATCTCTATATGCAGATGAACGCGACTAGAAG 539 Query 673 CGATATCTTAGCAGACAAAGGTCTCTCTGACCTATTTGTTTCAAATGGAGAGCTCAAGAA 732 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 540 CGATATCTTAGCAGACAAAGGTCTCTCTGAGCTTTTTGTTTCAAATGGAGAGCTCAAGAA 599 Query 733 ACCAGGGACGATTTGCCATAACCCAAAATTGGCTTTAAC-CTTGAAGCTAATTGGA-GAG 790 |||||||||||||| ||| ||||||||||||||||| || || |||| || | | || Sbjct 600 ACCAGGGACGATTTTCCAGAACCCAAAATTGGCTTTTACACT--AAGCCAAATCGCTGAA 657 Query 791 TACGGTCCAAAAGCATTTTACAATGGCACAGTTGGGGTTAACCTAGCGAGAGATAT-CAA 849 |||||||||||||| |||||||||||||| ||||||| |||||||| ||| ||||| ||| Sbjct 658 TACGGTCCAAAAGCGTTTTACAATGGCACGGTTGGGGCTAACCTAGTGAGTGATATACAA 717 Query 850 AAAATCTGGAGGAATAATAACTTTGAAAGATCTGCA-AAGTTATAGA-GTTAAGATTAAA 907 ||| || ||||||||||| |||||||||||| |||| || ||| | | |||||| ||||| Sbjct 718 AAA-TCAGGAGGAATAATCACTTTGAAAGATTTGCAGAA-TTACA-ACGTTAAGGTTAAA 774 Query 908 GAACCGTTGTCTGCAGACATTCTTGGATATAGAGTCCTTGGTATGCCTCCTCCTTCATCT 967 ||||| || ||||| || ||||||||||| || | || || |||||||||||||||||| Sbjct 775 GAACCATTATCTGCGGATATTCTTGGATACCGATTACTCGGCATGCCTCCTCCTTCATCT 834 Query 968 GGTGGCGCTGCAATGATGCTTGTTTTGAACATTCTTTCTCAATATGGGATTCCATCA-GG 1026 |||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| | || Sbjct 835 GGTGGCCCTGCAATGATGCTTATTTTGAACATTCTTGCTCAATATGGTATTCCAT-ATGG 893 Query 1027 TGTTTCA-GGC-CCTCTCGGTGTTCATCGACTAATCGAGGCTCTGAAACATGCATTCGCA 1084 |||| || ||| || |||||||||||||||||| | |||||||| |||||||||||||| Sbjct 894 TGTT-CACGGCGCC-CTCGGTGTTCATCGACTAGTTGAGGCTCTCAAACATGCATTCGCG 951 Query 1085 GTTAGAATGAACCTCGGGGATCCAGATTTCA-C--TGATGTTACCAAGGTTGTTTCGGAT 1141 || ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct 952 GTAAGAATGAACCTCGGGGATCCAGATTTCGTCCCTGATGTTACCAAGGTTGTTTCAGAT 1011 Query 1142 ATGTTGTCGCCAAAGTTTGCAAAAGACTTGAAGAGCAAGATAAACGACCAAAAAACTTTT 1201 |||||||| ||||||||||| ||||||||||||||||||||||||| | || || ||| Sbjct 1012 ATGTTGTCTCCAAAGTTTGCGCAAGACTTGAAGAGCAAGATAAACGATGAGAAGACCTTT 1071 Query 1202 GATCCAAAATATTACGGGGGCATGTGGAATCAGATCGACGACCACGGGACAAGTCATTTA 1261 | |||||||| |||||| |||| ||||||||||| | || || ||||| || |||||| Sbjct 1072 GGTCCAAAATTTTACGGTGGCAAATGGAATCAGATAAAGGATCATGGGACGAGCCATTTA 1131 Query 1262 TCGATCATAGAC-CGCGAGAGGAACGCTGTGTCTATGACTAGTACAATAAATGGTTACTT 1320 ||||| ||||| || ||||| || ||||| || ||||||| |||||| || || ||||| Sbjct 1132 TCGATAATAGATTCG-GAGAGAAATGCTGTTTCAATGACTACTACAATCAACGGATACTT 1190 Query 1321 TGGGGCATTGATGCTATCTCCGAGCACAGGAATAGTTCTGAACAACGAAATGGACGATTT 1380 ||||||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 1191 TGGGGCAATAATGCTGTCTCCGAGCACTGGAATTGTTCTAAACAACGAAATGGACGATTT 1250 Query 1381 CTCAATCCCTATGAAATCTA-ACGGTAACTTAGATGTTCCACCACCAGCACCAGCTAACT 1439 ||| ||||| |||||||| | ||| | |||||| || ||||| ||||||||||||| Sbjct 1251 CTCGATCCCAATGAAATCCGGA-GGTGGCCCAGATGTGCCGCCACCGGCACCAGCTAACT 1309 Query 1440 TCATCCGTCCTGGAAAACGACCTTTGTCCTCTATGTCACCCACCATTGTACTCAAGGACG 1499 |||||||||| || |||||||||||||| |||||| | |||||||||||||||||||||| Sbjct 1310 TCATCCGTCCGGGGAAACGACCTTTGTCATCTATGACTCCCACCATTGTACTCAAGGACG 1369 Query 1500 GTAAAGTGAAAGCCGCTGTGGGTGCGAGCGGAGGAGCCAACATTATTGCCGGGACAACGG 1559 ||||||||||||| || ||||||||||||||||| ||| || ||||| ||||| | Sbjct 1370 GTAAAGTGAAAGCAGCACTGGGTGCGAGCGGAGGAATGTTCATCATCGCCGGTACAACAG 1429 Query 1560 AAGTTTACTTGAATCATTTTTTCCTCAAGATGGATCCTCTTTCTTCCGTC-TTAGCTCCA 1618 ||||||||||||||||||| |||||||| ||||||||||| |||||||| || |||||| Sbjct 1430 AAGTTTACTTGAATCATTTCTTCCTCAACATGGATCCTCTCTCTTCCGTTGTT-GCTCCA 1488 Query 1619 AGAATCTACCATCAGCTGATACCAAACAGAGCTTCGTACGAGAACTGGACAACAGTAT-T 1677 ||||||||||| ||||||||||| |||| ||||||||| ||||| ||||| ||||| | | Sbjct 1489 AGAATCTACCACCAGCTGATACCGAACAAAGCTTCGTATGAGAATTGGACGACAGTGTAT 1548 Query 1678 CAATGATCATTTCGAGATTCCTAAAGCA-ACAAGAGTTGTGTTGGAGAAGAAAGGTCATG 1736 ||||| ||||| ||||||||| ||| | |||||| ||||||||||||||||||| |||| Sbjct 1549 -AATGACCATTTTGAGATTCCTGAAG-AGACAAGACTTGTGTTGGAGAAGAAAGGCCATG 1606 Query 1737 TCCTA-TCTCCTATTGCCGGAGGGACGATTGCTCAGTTCATAGTTCAAGAATCCGGTGAG 1795 ||||| | || |||||||||||||||||| |||||||||||||| ||||||||| || | Sbjct 1607 TCCTAATG-CCGATTGCCGGAGGGACGATTTCTCAGTTCATAGTTGAAGAATCCGATG-G 1664 Query 1796 AA-CTCCGGTGGAA-GAAGTGAGCTTGTGGCAGTTAGTGATCCTCGAAAAGGAGGGTTCC 1853 || ||||||||||| || || |||||||||| || |||||||| | ||||||||||||| Sbjct 1665 AAGCTCCGGTGGAATGA-GTAAGCTTGTGGCGGTCAGTGATCCAAGGAAAGGAGGGTTCC 1723 Query 1854 CTTCAGGATATTGA 1867 |||||||||||||| Sbjct 1724 CTTCAGGATATTGA 1737 > Ahg908566 jgi|Araly1|908566|Al_scaffold_0002_1647 Length=468 Score = 507 bits (274), Expect = 2e-142 Identities = 401/462 (87%), Gaps = 9/462 (2%) Strand=Plus/Plus Query 1413 ATGTTCCACCACCAGCACCAGCTAACTTCATCCGTCCTGGAAAACGACCTTTGTCCTCTA 1472 |||| || ||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 5 ATGTGCCGCCACCGGCACCAGCTAACTTCATCCGTCCCGGGAAACGACCTTTGTCCTCTA 64 Query 1473 TGTCACCCACCATTGTACTCAAGGAC-GGTAAAGTGAAAGCCGCTGTGGGTGCGAGCGGA 1531 || |||||||||||||||| |||| | ||||||||||||||||| || || ||||||||| Sbjct 65 TGACACCCACCATTGTACTGAAGG-CTGGTAAAGTGAAAGCCGCGGTAGGAGCGAGCGGA 123 Query 1532 GGAGCCAACATTATTGCCGGGACAACGGAAGTTTACTTGAATCATTTTTTCCTCAAGATG 1591 |||| ||||| || |||||||||| ||||||||| |||||| | |||||||||||||| Sbjct 124 GGAGTAAACATCATCGCCGGGACAATGGAAGTTTATTTGAATTGTATTTTCCTCAAGATG 183 Query 1592 GATCCTCTTTCTTCCGTCTTAGCTCCAAGAATCTACCATCAGCTGATACCAAACAGAGCT 1651 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct 184 GATCCTCTGTCTTCCGTCTTGGCTCCAAGAATCTACCATCAGCTGATACCAAACATAGTT 243 Query 1652 TCGTACGAGAACTGGACAACAGTATTCAATGATCATTTCGAGATTCCTAAAGCA-ACAAG 1710 ||||| || || ||||||||||| |||||||||||||||||| |||| |||| | ||||| Sbjct 244 TCGTATGAAAATTGGACAACAGTGTTCAATGATCATTTCGAGGTTCCGAAAG-AGACAAG 302 Query 1711 AGTTGTGTTGGAGAAGAAAGGTCATGTCCTATCTCCTATTGCCGG-AGGGACGATTGCTC 1769 |||||| ||||||||||||||||||| |||| || || || | ||| ||||||| || Sbjct 303 AGTTGTCTTGGAGAAGAAAGGTCATGCCCTAAGGCCGATC-CCTGTAGGAACGATTGTTC 361 Query 1770 AGTTCATAGTTCAAGAATCCGGTG-AGAACTCCGGTGGAAGAAGTGAGCTTGTGGCAGTT 1828 | |||||||||||||||||| ||| | || ||| |||||| |||||||||||||| || Sbjct 362 AATTCATAGTTCAAGAATCCAGTGCA-AATTCCAGTGGAATTAGTGAGCTTGTGGCGGTA 420 Query 1829 AGTGATCCTCGAAAAGGAGGG-TTCCCTTCAGGATATTGAGA 1869 |||||||| |||||| ||| |||||||| ||||||||||| Sbjct 421 AGTGATCCAATAAAAGGGGGGGTTCCCTTCGGGATATTGAGA 462 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74009346035 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5