BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G01540.1 Length=2494 Score E Sequences producing significant alignments: (Bits) Value Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1 3162 0.0 Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 1171 0.0 > Ahg486921 jgi|Araly1|486921|fgenesh2_kg.6__55__AT5G01540.1 Length=2283 Score = 3162 bits (1712), Expect = 0.0 Identities = 2028/2180 (93%), Gaps = 23/2180 (1%) Strand=Plus/Plus Query 140 ATGGGCAC-ACAAAGATCCA-TGTTCATAGTCTCATTCTTATTCAAGCTTTTCCTGTTTT 197 |||||||| | |||||||| || || || ||||| |||||||||| ||||||||||||| Sbjct 95 ATGGGCACTGC-AAGATCCATTG-TCTTACTCTCACTCTTATTCAATCTTTTCCTGTTTT 152 Query 198 TGAGCGTCCATGTTCGAGCTCAGAGAACAACAACAAATTTTGCTTTCCGAGGTTTTAACG 257 |||||||||||||| | |||||||||||||||||| ||||| |||||||||||||| | Sbjct 153 TGAGCGTCCATGTTGGGGCTCAGAGAACAACAACAGATTTTACTTTCCGAGGTTTTCTTG 212 Query 258 GAAACCAATCGAAGATTCGGATTGAAGGAGCCGCGATGATCAAACCCGACGGACTATTGA 317 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 213 GAAACCAATCAAAGATTCGGATTGAAGGAGCCGCGATGATCAAACCCGAGGGACTATTGA 272 Query 318 GACTCACTGACCGAAAGTCGAATGTTACCGGTACAGCTTTCTACCACAAACCGGTGAGGT 377 | |||||||| || ||||| || ||||||||||| ||||||||||||||||||||||| | Sbjct 273 GGCTCACTGATCGGAAGTCAAACGTTACCGGTACGGCTTTCTACCACAAACCGGTGAGAT 332 Query 378 TGCT------TAATAGAAATTCCACAAACGTCACAATTCGTTCCTTTAGCACGTCTTTCG 431 |||| || |||||||||||||||||||| | |||||||||||||||| |||||| Sbjct 333 TGCTGGAGACTAGTAGAAATTCCACAAACGTCAGAGTTCGTTCCTTTAGCACTTCTTTCA 392 Query 432 TCTTTGTCATAATCCCTTCAAGCTCAAGCAATAAAGGCTTTGGATTCACATTCACACTAT 491 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 393 TCTTTGTCATAATCCCTTCAAGCTCAAGCAATAAAGGTTTTGGATTCACATTCACACTAT 452 Query 492 CTCCAACACCTTATCGTCTCAATGCTGGATCCGCACAGTACTTGGGAGTTTTCAACAAAG 551 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453 CTCCAACCCCTTATCGTCTCAATGCTGGATCCGCACAGTACTTGGGAGTTTTCAACAAAG 512 Query 552 AGAACAATGGGGATCCTAGGAACCACGTATTCGCAGTGGAATTCGACACGGTGCAAGGAT 611 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 513 AGAACAATGGGGATCCTAGGAATCACGTTTTCGCAGTGGAATTCGACACGGTGCAAGGAT 572 Query 612 CAAGAGACGACAACACCGACAGAATAGGAAACGACATCGGTCTGAATTACAACAGTCGTA 671 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 573 CCAGAGACGACAACACCGACAGAATAGGAAACGACATCGGTCTGAATTACAACAGTCGTA 632 Query 672 CTTCGGATCTCCAAGAACCAGTCGTGTATTACAACAATGATGATCAC-AACAAAAAAGAA 730 |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 633 CTTCGGATCTACAAGAACCAGTCGTGTATTACAACAATGATGATC-CTAACAAAAAAGAA 691 Query 731 GATTTCCAGCTTGAGAGTGGCAATCCTATTCAAGCCCTTTTGGAGTATGATGGAGCAACA 790 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 692 GATTTCCAGCTTGAGAGTGGCAATCCGATTCAAGCCCTTTTGGAGTATGATGGACCAACA 751 Query 791 CAAATGCTAAACGTCACCGTTTATCCCGCGAGATTAGGGTTTAAACCCACAAAGCCTTTG 850 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 752 CAAATGCTAAACGTCACCGTTTATCCGGCGAGATTGGGGTTTAAACCCACAAAGCCTTTG 811 Query 851 ATCTCTCAACATGTTCCAAAACTGTTGGAGATTGTGCAAGAAGAAATGTACGTCGGATTC 910 |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| Sbjct 812 ATCTCTCAACATGTTCCAAAACTGTTAGAGATTGTGCAACAAGAAATGTATGTCGGATTC 871 Query 911 ACGGCATCGACGGGGAAAGGTCAGTCAAGTGCTCATTACGTGATGGGTTGGAGTTTCTCA 970 || || |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 872 ACTGCGTCGACGGGGAAAGGTCAGTCGAGTGCTCATTACGTAATGGGTTGGAGTTTCTCA 931 Query 971 AGCGGCGGAGAACGTCCAATTGCGGATGTTCTA-ATCCTCTCGGAGCTTCCTCCGCCGCC 1029 ||||||||||||||||||||||| || || || ||| |||||||||||||||| ||||| Sbjct 932 AGCGGCGGAGAACGTCCAATTGCAGACGTCCTCGATC-TCTCGGAGCTTCCTCCTCCGCC 990 Query 1030 GCCGAATAAGGCGAAGAAGGAAGGTTTAAATTCTCAAGTCATTGTTATGATCGTGGCGTT 1089 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || Sbjct 991 GCCGAATAAGGCGAAGAAAGAAGGTTTAAATTCTCAAGTCATTGTTATGATCGTGTCTTT 1050 Query 1090 ATCGGCAGTAATGCTGGTCATGCTTGTGTTACTCTTCTTCTTCGTCATGTACAAGAAGAG 1149 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1051 ATCGGCCGTAATGCTGGTCATGCTTGTGTTGCTCTTCTTCTTCGTCATGTACAAAAAGAG 1110 Query 1150 ACTGGGACAAGAAGAGACTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATA 1209 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1111 ATTGGGACAAGAAGAGACTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATA 1170 Query 1210 CAGAGACCTCTACGTAGCCACGGATGGATTCAAAAAGACTGGAATCATCGGAACCGGAGG 1269 |||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 1171 CAGAGATCTCTACGTAGCCACGGATGGATTCAAGAAGACGGGGATCATCGGAACCGGAGG 1230 Query 1270 ATTTGGAACCGTTTTCAAAGGAAAACTGCCGAATTCGGATCCCATCGCAGTGAAGAAGAT 1329 ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct 1231 ATTTGGAACCGTTTTCAAAGGAAAACTCCCAAATTCGGATCCCATCGCTGTGAAGAAGAT 1290 Query 1330 AATTCCAAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGAA 1389 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1291 AATTCCCAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGAA 1350 Query 1390 ACTAAGGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTT 1449 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1351 ATTAAGGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTT 1410 Query 1450 GTTGATTTACGATTACATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAG 1509 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1411 GTTGATTTACGATTATATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAG 1470 Query 1510 AAGAAGCGGCGCCGTTTTGTCGTGGAACGCTCGTTTTCAGATCGCTAAAGGAATCGCGTC 1569 ||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||| Sbjct 1471 AAGAAGCGGCGCCGTGTTGTCGTGGAACGCGCGTTTCCAGATCGCTGAAGGAATCGCGTC 1530 Query 1570 TGGTTTATTGTATCTTCACGAAGAATGGGAGAAGATTGTGATTCATAGAGACGTGAAACC 1629 |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1531 TGGTTTGTTGTATCTTCACGAAGAATGGGAAAAGATTGTGATTCACAGAGACGTGAAACC 1590 Query 1630 TAGCAATGTCTTGATCGATTCAAAGATGAACCCTAGATTGGGAGATTTTGGACTCGCGAG 1689 |||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1591 TAGCAACGTTTTGATTGATTCCAAGATGAACCCTAGATTGGGAGATTTTGGACTCGCGAG 1650 Query 1690 GCTTTACGAACGCGGAACGCTATCGGAAACAACAGCACTCGTTGGAACCATCGGGTACAT 1749 ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct 1651 GCTTTACGAACGCGGAACGCTATCGCAGACAACAGCACTCGTTGGAACCATTGGGTACAT 1710 Query 1750 GGCGCCAGAGCTTTCCCGCAACGGAAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGG 1809 |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1711 GGCGCCAGAGCTCTCCCGAAACGGCAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGG 1770 Query 1810 CGTTTTGTTGTTAGAGATCGTTTGCGGGAGAAAACCAACGGATTCCGGTACCTTCTTCTT 1869 ||||||| ||||||| ||||| | |||||||||||| ||||||||| ||| ||||||||| Sbjct 1771 CGTTTTGCTGTTAGAAATCGTCTCCGGGAGAAAACCGACGGATTCCTGTAGCTTCTTCTT 1830 Query 1870 GGTCGATTGGGTTATGGAGCTTCACGCGAACGGTGAGATTCTCAGTGCGATTGATCCGAG 1929 |||||||||||||||||||| || |||| ||||||||| ||||| ||||| |||||||| Sbjct 1831 AGTCGATTGGGTTATGGAGCTACAAGCGAGCGGTGAGATCCTCAGCGCGATCGATCCGAG 1890 Query 1930 ACTAGGATCTGGTTACGACGGAGGAGAAGCAAGGCTTGCTCTCGCCGTCGGATTGCTCTG 1989 ||| |||||||||||||||| |||||| |||||||||||||| ||||| || |||||||| Sbjct 1891 ACTCGGATCTGGTTACGACGAAGGAGAGGCAAGGCTTGCTCTTGCCGTGGGTTTGCTCTG 1950 Query 1990 TTGCCACCAAAAACCGGCGTCTCGGCCGTCGATGAGAATCGTGCTTAGGTATCTAAACGG 2049 |||||||||||||||| ||||||||||| |||||||||| ||||| ||||| || ||| | Sbjct 1951 TTGCCACCAAAAACCGACGTCTCGGCCGCCGATGAGAATGGTGCTCAGGTACCTGAACAG 2010 Query 2050 AGAGGAGAATGTACCTGAGATTGACGATGAGTGGGGATATTCAAAGTCTTCAAGAAGCGA 2109 ||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2011 AGACGAGGATGTTCCTGAGATTGACGATGAGTGGGGATATTCAAAGTCTTCAAGAAGCAA 2070 Query 2110 ATTCGGATCCAAGTTGGTAGGATATGTTTCGTCGACCTCAATCACCAGAGTTTCTTCGAC 2169 |||||||||||| || |||||||||| ||| | || ||||||| |||||||||||||||| Sbjct 2071 ATTCGGATCCAATTTTGTAGGATATGATTCATTGAGCTCAATCGCCAGAGTTTCTTCGAC 2130 Query 2170 TTCTCGTATCAGTCAGTAGTGGATAAAGCACATTCACTTTTTTGCTTCGAATTAGTCAAA 2229 |||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||| Sbjct 2131 TTCTCGTATCAGTCAGTAGTGGATAATGCATGTTCACTTTCTTGCTTCGAATTGGTCAAA 2190 Query 2230 TCGTTTAGCTT-CAAAAGACCAAAACATGATTTAACTAGTACTTATGATTAATGAACAAT 2288 || |||||||| |||||||||||||||| | ||||||| | | | ||| | || ||||| Sbjct 2191 TCTTTTAGCTTTCAAAAGACCAAAACATAAGTTAACTA-T--T-A-GAT-A-TGGACAAT 2243 Query 2289 AGTATAAAATAAATTTGTTG 2308 |||||||||||||||| ||| Sbjct 2244 AGTATAAAATAAATTT-TTG 2262 > Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 Length=2299 Score = 1171 bits (634), Expect = 0.0 Identities = 1344/1675 (80%), Gaps = 95/1675 (6%) Strand=Plus/Plus Query 241 TTTCCGA-GGTTTTAACGGAAACCAAT-CGAAGATTCGGATTG-AAGGAGCCGCGATGAT 297 ||||| | ||||| || |||||||||| |||| |||| || || |||||| | | || Sbjct 349 TTTCC-ATGGTTTCAAAGGAAACCAATCCGAA-ATTCAGA-TGCAAGGAGATTCAACCAT 405 Query 298 CAAACCCGACGGACTATTGAGACTCACTGACCGAAAGTCGAATGTTACCGGTACAGCTTT 357 || | || |||||||||| || ||||| || ||||| ||| | ||| |||||||||||| Sbjct 406 CACATCCAACGGACTATTAAGGCTCACAGATCGAAACTCGGACGTTGTCGGTACAGCTTT 465 Query 358 CTACCACAAACCGGTGAGGTTGCTTAATAGAAATTCCA-CAA-ACGTCACAATTCGTTCC 415 |||||| ||||||||||| ||||| | || || |||| ||| ||| || |||||||| Sbjct 466 CTACCATAAACCGGTGAGATTGCTCGACAGTAACTCCACCAATACG--ACGGTTCGTTCC 523 Query 416 TTTAGCACGTCTTTCGTCTTTGTCATAATCCCTTCAAGCT---CAAGCAATAAAGGCTTT 472 |||||||| ||||||||| | || ||||||||||||||| ||||||| ||| ||| Sbjct 524 TTTAGCACTTCTTTCGTC--T-TCGTAATCCCTTCAAGCTCAACAAGCAACGGAGGTTTT 580 Query 473 GGATTCACATTCACACTATCTCCAACACCTTATCGTCTCA-ATGCTGGAT-CCGCA-CAG 529 || |||||||||||||| |||||||| || | ||| || | || ||| ||| | ||| Sbjct 581 GGCTTCACATTCACACTCTCTCCAACCCCAAACCGT-ACAGACGC-AGATCCCG-AGCAG 637 Query 530 TACTTGGGAG-TTTTCAAC-AAAGAGAACAATGGGGATCCTAGGAACCACGTATTCGCAG 587 | |||||| | || ||||| ||||| ||| | ||| || | || || ||||| || || | Sbjct 638 TTCTTGGG-GCTTCTCAACGAAAGA-AACGACGGGAATTCAAGCAATCACGTTTTTGCTG 695 Query 588 TGGAATTCGACACGGTGCAAGGA-TCAAGAGAC-G-ACAACACCGACAGAATAGGAAACG 644 |||||||||||||||| |||||| |||| |||| | |||| | | ||||||| ||| Sbjct 696 TGGAATTCGACACGGTACAAGGATTCAA-AGACGGTACAA-A---TC-GAATAGGCAACC 749 Query 645 ACATCGGTCTGAATTACAACAGTCGT-ACTTCGGATCTCCAAGAACCAGTCG-TGTATTA 702 |||||||||| |||| |||||||| | |||| ||| |||||||||| || | | ||||| Sbjct 750 ACATCGGTCTAAATTTCAACAGTC-TCTCTTCAGATGTCCAAGAACCGGTGGCT-TATTA 807 Query 703 CAACAATGATGATCACAACAAAAAAGAAGATTTCCAGCTTGAGAGTGGCAATCCTATTCA 762 |||||| | ||| | | | ||||| || ||||| || | ||| ||| | || || || Sbjct 808 CAACAACAACGAT-A-GTC-AGAAAGAGGAATTCCAACTGGTGAGCGGCGAGCCAATCCA 864 Query 763 AGCCCTT-TTGGAGTATGATGGAGCAACACAAATGCTAAACGTCACCGTTTATCCC-GCG 820 || ||| ||||| ||| | ||| |||| |||||||| ||| |||| ||||| ||| | Sbjct 865 AG-TCTTCTTGGATTATCACGGACCAACCCAAATGCTTAACCTCACTGTTTA-CCCAACC 922 Query 821 AGATTAGGG-TTTAAACCCACAAAGCCTTTGATCTCTCAACATGTTCCAAAACTGTTGGA 879 ||| | ||| | |||||| | || || |||||||| | | | ||||||||||||| || Sbjct 923 AGACT-GGGATATAAACCAAGAATCCCCTTGATCTCACGAGAGGTTCCAAAACTGTCAGA 981 Query 880 GATTGTGCAAGAAGAAATGTACGTCGGATTCACGGCATCGAC-GGG-GA-AAGGTCAGTC 936 |||||| ||| ||||||| |||||||||||| ||| |||| ||| || | || || || Sbjct 982 TATTGTGGTAGATGAAATGTTCGTCGGATTCACAGCAGCGACTGGGAGACACGGACAATC 1041 Query 937 AAGTGCTCATTACGTGATGGGTTGGAGTTTCTCAAGCGGCGGAGAACGTCCAATTGC-G- 994 ||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||| | Sbjct 1042 GAGTGCTCATTATGTGATGGGTTGGAGTTTCGCAAGCGGCGGAGAACATCCACTTGCAGC 1101 Query 995 GATGTTCTAATCCTCTCGGAGCTTCCTCCGCCGCCGCCGAATAAGGCGAAGAAGGA-AGG 1053 ||| || | |||||| | |||||||| ||||| || ||||||| |||||| || ||| Sbjct 1102 TATGCTC-GA-CCTCTCCCAACTTCCTCCTCCGCCTCCAAATAAGGAGAAGAA-GAGAGG 1158 Query 1054 TTTA-AATTCTCAA-GTCATTGTTATGATCGTGGCGTTATCGGCAG-TA-ATGCTGGTCA 1109 || ||| | || ||||| | | |||||||||| |||||| | | || || | | ||| Sbjct 1159 -CTACAATGGT-AAGGTCATCGCTCTGATCGTGGCTTTATCGACTGTTATAT-C-GATCA 1214 Query 1110 TGCTT-GTGTTACT-CTTCTTCTTCGTCATGTACAAGAAGAGACTGGGA-CAAGAAGAGA 1166 || || ||||| | ||| ||||| | |||||||| ||| || | | | |||||||||| Sbjct 1215 TG-TTGGTGTTGTTGTTTC-TCTTCATGATGTACAAAAAGCGAAT-GCAGCAAGAAGAGA 1271 Query 1167 CTCTTGAAGACTGGGAAATCGATCATCCTCGCAGATTGAGATACAGAGACCTCTACG-TA 1225 ||| ||||| ||||||||||||||||||| |||||| |||||||||||||||| | | Sbjct 1272 TTCTAGAAGATTGGGAAATCGATCATCCTCACAGATTTCGATACAGAGACCTCTATGCT- 1330 Query 1226 GCCACGGATGGATTCAAAAAGACT-GGAATCATCGGAACCGGAGGATTTGGAACCGTTTT 1284 || || ||||||||||| ||| | || || |||||||||||||||| ||| |||| Sbjct 1331 GCTACTGATGGATTCAAGGAGAATCGG-ATTGTCGGAACCGGAGGATTCGGAGTTGTTTA 1389 Query 1285 CAAAGGAAA-A-CTGC--CGA--AT--TCGGATCCCATCGCAGTGAAGAAGATAATTCC- 1335 || |||||| | || | | | | || || | ||||||||||||||||||| ||| Sbjct 1390 CAGAGGAAACATCT-CATC-ATCTTCCTCTGAACAAATCGCAGTGAAGAAGATAACTCCG 1447 Query 1336 AAGTAGCAGGCAAGGTGTTCGAGAATTTGTCGCAGAGATCGAGAGTTTGGGGA-AACTAA 1394 || ||||| |||||||||||||||||| ||||||||||| |||||||| |||| | ||| Sbjct 1448 AA-TAGCATGCAAGGTGTTCGAGAATTCGTCGCAGAGATAGAGAGTTT-GGGACGATTAA 1505 Query 1395 GGCATAAGAATCTGGTGAACCTCCAAGGATGGTGCAAACACAAAAACGATCTCTTGTTGA 1454 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 1506 GGCATAAGAATCTGGTGAACCTCCAAGGATGGTGTAAACACAGAAACGATCTCTTGTTGA 1565 Query 1455 TTTACGATTACATCCCCAACGGAAGCTTAGACTCTCTGCTCTACACTGTACCGAGAAGAA 1514 |||||||||| || |||||||||||||||||||| |||||||||| | ||||||||||| Sbjct 1566 TTTACGATTATATACCCAACGGAAGCTTAGACTCGCTGCTCTACAGTAAACCGAGAAGAA 1625 Query 1515 GCGGCGCCGTTTTGTCGTGGAACGCTCGTTTTCAGATCGCTAAAGGAATCGCGTCTGGTT 1574 ||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||| Sbjct 1626 GCGGCGCGGTTTTGTCGTGGAACGCGCGTTTTCAGATCGCCAGAGGAATCGCGTCTGGTT 1685 Query 1575 TATTGTATCTTCACGAAGAATGGGAGAAGATTGTGATTCATAGAGACGTGAAACCTAGCA 1634 | |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||| Sbjct 1686 TGTTGTATCTACACGAGGAATGGGAAAAGATTGTGATTCACAGAGACGTGAAACCTAGCA 1745 Query 1635 ATGTCTTGATCGATTCAAAGAT--GAACCCTAGATTGGGAGATTTTGGACTCGCGAGGCT 1692 | || ||||| || | | ||| ||||||||||||||||||||| || || |||||||| Sbjct 1746 ACGTTTTGATTGA--CGACGATATGAACCCTAGATTGGGAGATTTCGGGCTAGCGAGGCT 1803 Query 1693 TTACGAACGCGGAACGCTATCG-GAAACAACAGCACTCGTTGGAACCATCGGGTACATGG 1751 ||||||||||||| | | |||| ||| || | | | |||| || || || ||||| |||| Sbjct 1804 TTACGAACGCGGATCTCAATCGCGAACCACC-GTAGTCGTCGGCACGATTGGGTATATGG 1862 Query 1752 CGCCAGAGCTTTCCCGCAACGGAAACCCCTCATCTGCGTCTGATGTTTTCGCGTTTGGCG 1811 |||| ||||| |||||||||||||| ||||||| || || || |||||||||||||||| Sbjct 1863 CGCCGGAGCTAGCCCGCAACGGAAACTCCTCATCAGCTTCCGACGTTTTCGCGTTTGGCG 1922 Query 1812 TTTTGTTGTTAGAGATCGTTTGCGGGAGAAAACCAACGGATTCCGGTACCTTCTT 1866 ||||| ||||||| ||||| | |||||||||||| ||||| || || |||||||| Sbjct 1923 TTTTGCTGTTAGAAATCGTCTCCGGGAGAAAACCGACGGACTCTGGGACCTTCTT 1977 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94006724660 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5