BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G03340.1 Length=2671 Score E Sequences producing significant alignments: (Bits) Value Ahg939714 jgi|Araly1|939714|scaffold_600258.1 4135 0.0 Ahg478309 jgi|Araly1|478309|fgenesh2_kg.3__1010__AT3G09840.1 2684 0.0 > Ahg939714 jgi|Araly1|939714|scaffold_600258.1 Length=2473 Score = 4135 bits (2239), Expect = 0.0 Identities = 2384/2456 (97%), Gaps = 2/2456 (0%) Strand=Plus/Plus Query 86 AGCTATCATTATGTCAAACGAACCGGAATCCTCCGACTCGAAAACTAAGAAGGATTTCAG 145 |||||||| |||||||||| |||| ||||| |||||||||||| |||||||||||||||| Sbjct 11 AGCTATCACTATGTCAAACCAACCTGAATCTTCCGACTCGAAACCTAAGAAGGATTTCAG 70 Query 146 TACTGCGATTCTAGAGAGGAAGAAGTCTCCAAACCGACTTGTTGTCGATGAAGCTATTAA 205 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 71 TACTGCGATTCTCGAGAGGAAGAAGTCTCCAAACCGACTTGTTGTCGATGAAGCCATTAA 130 Query 206 CGATGACAACTCTGTTGTCTCTCTCCATCCTACTACCATGGAAAAACTCCAGCTTTTCCG 265 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 131 CGATGACAACTCTGTTGTCTCTCTCCATCCTGCTACCATGGAAAAGCTCCAGCTTTTCCG 190 Query 266 AGGCGATACAATTCTCATCAAGGGTAAGAAGAGGAAGGACACTGTATGCATTGCCCTCGC 325 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 191 AGGCGATACAATTCTCATCAAGGGTAAGAAGAGAAAGGACACTGTGTGCATTGCCCTTGC 250 Query 326 TGATGAAACATGTGAGGAACCCAAGATCAGAATGAATAAGGTTGTAAGGTCTAACTTGAG 385 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 251 TGATGAAACATGTGAGGAACCCAGGATCAGAATGAATAAGGTTGTAAGGTCTAACTTGAG 310 Query 386 GGTTAGGCTGGGAGATGTTATTTCTGTTCACCAATGCCCAGATGTCAAGTATGGAAAGCG 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 GGTTAGGCTGGGAGATGTTATTTCTGTTCACCAATGCCCAGATGTCAAGTATGGAAAGCG 370 Query 446 TGTTCACATCTTGCCTGTTGATGATACAGTTGAAGGCGTTACTGGAAACCTCTTTGATGC 505 ||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 371 TGTGCACATCTTGCCAGTTGATGATACAGTTGAAGGCGTTACTGGAAACCTTTTTGATGC 430 Query 506 TTACCTGAAACCTTACTTTCTGGAGGCGTACCGTCCAGTGAGGAAGGGAGATCTTTTCCT 565 |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 431 TTACCTTAAACCTTACTTCCTGGAGGCGTACCGCCCAGTGAGGAAGGGAGATCTTTTCCT 490 Query 566 AGTGAGAGGAGGAATGAGGAGTGTGGAGTTCAAAGTGATCGAGACTGATCCTGCTGAGTA 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 491 AGTGAGAGGAGGAATGAGGAGTGTGGAGTTCAAAGTGATCGAGACTGATCCTGCTGAGTA 550 Query 626 CTGTGTGGTGGCTCCAGATACAGAGATTTTCTGTGAGGGTGAACCAGTTAAGAGGGAGGA 685 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 551 CTGTGTGGTGGCTCCAGATACAGAGATTTTCTGTGAGGGTGAACCAGTCAAGAGGGAAGA 610 Query 686 CGAAGAAAGGCTTGATGAGGTTGGTTATGACGATGTTGGTGGTGTCAGGAAACAGATGGC 745 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 611 CGAAGAAAGGCTTGATGAGGTCGGTTATGACGATGTTGGTGGTGTCAGGAAACAGATGGC 670 Query 746 TCAGATTAGGGAATTGGTTGAACTTCCCTTGAGGCATCCACAACTCTTTAAATCAATTGG 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 671 TCAGATTAGGGAATTGGTTGAACTTCCCTTGAGGCATCCACAACTCTTTAAATCAATTGG 730 Query 806 TGTGAAGCCACCAAAGGGAATTCTGCTTTACGGACCTCCTGGATCCGGGAAGACTCTTAT 865 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 731 TGTGAAGCCACCAAAGGGAATTCTGCTTTATGGACCTCCTGGATCCGGGAAGACTCTTAT 790 Query 866 TGCTCGTGCTGTGGCTAATGAAACCGGAGCATTCTTCTTCTGTATCAATGGACCGGAAAT 925 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 791 TGCTCGTGCTGTGGCTAATGAAACCGGGGCATTTTTCTTCTGTATCAATGGACCGGAAAT 850 Query 926 CATGTCGAAACTAGCTGGTGAGAGTGAGAGCAACCTCAGGAAAGCATTTGAGGAGGCTGA 985 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 CATGTCCAAACTGGCTGGTGAGAGTGAGAGCAACCTCAGGAAAGCATTTGAGGAGGCTGA 910 Query 986 GAAGAATGCCCCGTCTATCATATTCATTGATGAGATTGACTCTATTGCACCAAAAAGAGA 1045 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 911 GAAGAATGCCCCTTCTATCATATTCATTGATGAGATTGACTCTATTGCACCAAAAAGAGA 970 Query 1046 GAAGACGAATGGTGAGGTTGAGAGGAGGATTGTCTCTCAGCTCCTTACGCTTATGGATGG 1105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 971 GAAGACGAATGGTGAGGTTGAGAGGAGGATTGTCTCTCAGCTCCTTACGCTTATGGATGG 1030 Query 1106 ACTAAAATCACGTGCCCATGTTATTGTTATGGGAGCAACAAATCGTCCCAACAGTATTGA 1165 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1031 ACTAAAATCACGTGCCCATGTTATTGTTATGGGAGCAACAAATCGCCCCAACAGTATTGA 1090 Query 1166 TCCGGCTTTGAGAAGGTTTGGAAGATTCGACAGGGAAATTGATATCGGTGTTCCTGATGA 1225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1091 TCCGGCTTTGAGAAGGTTTGGAAGATTCGACAGGGAAATTGATATCGGTGTTCCTGATGA 1150 Query 1226 AATTGGACGTCTTGAAGTTCTTAGGATCCACACGAAGAACATGAAGCTAGCTGAAGATGT 1285 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1151 AATTGGACGTCTTGAAGTTCTTAGGATCCACACAAAGAACATGAAGCTAGCTGAAGATGT 1210 Query 1286 TGATCTAGAAAGAATCTCCAAGGACACGCATGGATATGTTGGAGCTGATCTTGCAGCTCT 1345 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1211 GGATCTAGAAAGAATCTCCAAGGACACGCATGGATATGTTGGAGCTGATCTTGCAGCTCT 1270 Query 1346 ATGCACTGAAGCTGCCCTTCAATGTATCAGAGAGAAGATGGATGTGATTGACTTGGAAGA 1405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1271 ATGCACTGAAGCTGCCCTTCAATGTATCAGAGAGAAGATGGATGTGATTGACTTGGAAGA 1330 Query 1406 TGACTCAATTGACGCCGAAATCCTCAATTCCATGGCTGTGTCTAATGAACACTTCCACAC 1465 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1331 TGACTCAATTGACGCCGAAATCCTCAATTCCATGGCGGTGTCTAATGAACACTTCCACAC 1390 Query 1466 TGCTCTTGGAAACAGCAACCCATCCGCCCTTCGTGAAACTGTTGTGGAGGTTCCAAATGT 1525 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1391 CGCTCTTGGAAACAGCAACCCATCCGCACTTCGTGAAACTGTTGTGGAGGTTCCAAATGT 1450 Query 1526 CTCCTGGGAGGATATTGGAGGTCTCGAGAATGTTAAGAGAGAGCTTCAGGAGACTGTTCA 1585 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1451 CTCCTGGGAGGATATTGGAGGTCTTGAGAATGTTAAGAGAGAGCTTCAGGAGACTGTTCA 1510 Query 1586 ATACCCTGTGGAGCATCCAGAGAAATTCGAGAAGTTTGGTATGTCTCCATCAAAGGGAGT 1645 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1511 ATACCCTGTTGAGCATCCAGAGAAATTCGAAAAGTTTGGTATGTCTCCATCAAAGGGAGT 1570 Query 1646 TCTTTTCTACGGTCCTCCTGGATGTGGTAAAACCCTGTTAGCCAAAGCTATAGCAAACGA 1705 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1571 TCTTTTCTACGGTCCTCCTGGATGTGGGAAAACCCTTTTAGCCAAAGCTATAGCAAACGA 1630 Query 1706 GTGCCAAGCAAACTTCATCAGTGTCAAGGGACCCGAGCTTCTCACAATGTGGTTTGGAGA 1765 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1631 GTGCCAAGCAAACTTCATCAGTGTCAAAGGACCTGAGCTTCTCACAATGTGGTTTGGAGA 1690 Query 1766 AAGTGAAGCCAACGTCCGAGAAATCTTTGACAAGGCTCGTCAATCTGCTCCTTGTGTTCT 1825 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1691 AAGTGAAGCCAACGTCCGTGAAATCTTTGACAAGGCTCGTCAATCTGCTCCTTGTGTTCT 1750 Query 1826 GTTTTTCGATGAGCTAGACTCCATTGCTACTCAGAGAGGGAACAGCGCGGGTGATGCCGG 1885 ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 1751 GTTTTTCGATGAGCTCGACTCCATTGCTACTCAGAGAGGAAACAGCGTGGGTGATGCCGG 1810 Query 1886 CGGTGCAGCTGACAGAGTGTTGAATCAGCTTTTGACAGAAATGGATGGAATGAATGCAAA 1945 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1811 CGGTGCAGCTGATAGAGTGTTGAATCAGCTTCTGACAGAAATGGATGGAATGAATGCAAA 1870 Query 1946 GAAGACGGTATTCATTATTGGAGCAACTAACAGACCGGATATCATAGATTCAGCTCTTCT 2005 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 1871 GAAGACGGTATTCATTATTGGAGCAACTAACAGGCCGGATATCATAGATCCAGCTCTTCT 1930 Query 2006 TCGACCTGGAAGACTCGACCAGCTTATCTACATTCCTCTACCTGATGAAGATTCCCGTCT 2065 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1931 TCGACCTGGAAGACTCGACCAGCTTATCTATATTCCTCTACCTGATGAAGATTCCCGTCT 1990 Query 2066 CAATATCTTTAAGGCCTGCTTGAGAAAATCTCCCGTCGCTAAAGATGTAGATGTTACTGC 2125 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 1991 CAATATCTTCAAGGCCTGCTTGAGAAAATCTCCTGTCGCTAAAGATGTAGATGTGACTGC 2050 Query 2126 ACTCGCAAAGTACACTCAGGGATTCAGTGGTGCTGATATCACCGAGATCTGCCAGAGAGC 2185 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2051 ACTCGCTAAGTACACTCAGGGATTCAGTGGTGCTGATATCACTGAGATCTGCCAGAGAGC 2110 Query 2186 TTGCAAGTACGCCATCAGAGAAAACATCGAAAAGGATATTGAGAACGAGCGTAGAAGGAG 2245 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 2111 TTGCAAGTACGCCATCAGAGAAAATATCGAAAAGGATATTGAGAAAGAGCGTAGAAGGAG 2170 Query 2246 CCAGAATCCAGAGGCCATGGAGGAAGATATGGTGGATGATGAAGTTTCAGAGATTAGAGC 2305 | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2171 CGAGAATCCAGAGGCGATGGAGGAAGATATGGTGGATGATGAAGTTTCAGAGATTCGAGC 2230 Query 2306 TGCTCATTTCGAAGAGTCGATGAAATATGCAAGGAGAAGTGTGAGTGATGCTGATATTCG 2365 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2231 TGCTCATTTCGAAGAGTCGATGAAATATGCAAGGAGAAGTGTAAGTGATGCTGATATTCG 2290 Query 2366 CAAGTACCAAGCTTTTGCTCAGACGCTGCAGCAATCCAGAGGGTTTGGATCTGAGTTCAG 2425 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2291 CAAGTACCAAGCTTTTGCTCAGACACTGCAGCAATCGAGAGGGTTTGGATCTGAGTTCAG 2350 Query 2426 GTTTGACTCAACCGCTGGTGTCGG-ACGCACCACTGGTGTTGCAGCCGCCGATCCCTTTG 2484 |||||||||||||||| || ||| |||||||| ||||| |||| |||| |||||||||| Sbjct 2351 GTTTGACTCAACCGCTTCTG-CGGGACGCACCATTGGTGGTGCACCCGCTGATCCCTTTG 2409 Query 2485 CCACTTCTGCAGCTGCAGCTGATGACGACGATCTCTACAGTTAGATTTTGATTTCT 2540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2410 CCACTTCTGCAGCTGCAGCTGATGACGACGATCTCTACAGTTAGATTATGATTTCT 2465 > Ahg478309 jgi|Araly1|478309|fgenesh2_kg.3__1010__AT3G09840.1 Length=2732 Score = 2684 bits (1453), Expect = 0.0 Identities = 2118/2439 (87%), Gaps = 45/2439 (2%) Strand=Plus/Plus Query 111 GAATCCTCCGACTCGAAAACTAAGAAGGATTTCAGTACTGCGATTCTAGAGAGGAAGAAG 170 ||||| || ||||||||| | ||||| |||||||||||||| ||||| |||||||||||| Sbjct 141 GAATCTTCAGACTCGAAATCGAAGAAAGATTTCAGTACTGCTATTCTCGAGAGGAAGAAG 200 Query 171 TCTCCAAACCGACTTGTTGTCGATGAAGCTATTAACGATGACAACTCTGTTGTCTCTCTC 230 ||||| ||||| ||||| |||||||| || || |||||||| ||||| || |||||||| Sbjct 201 TCTCCGAACCGTCTTGTCGTCGATGAGGCAATCAACGATGATAACTCCGTCGTCTCTCTT 260 Query 231 CATCCTACTACCATGGAAAAACTCCAGCTTTTCCGAGGCGATACAATTCTCATCAAGGGT 290 || ||| | |||||||| || || ||||| ||||| || ||||| ||||||||||||||| Sbjct 261 CACCCTGCAACCATGGAGAAGCTTCAGCTCTTCCGTGGTGATACCATTCTCATCAAGGGT 320 Query 291 AAGAAGAGGAAGGACACTGTATGCATTGCCCTCGCTGATGAAACATGTGAGGAACCCAAG 350 ||||| |||||||||||||| |||||||| ||||| ||||| |||||||||| || ||| Sbjct 321 AAGAAAAGGAAGGACACTGTCTGCATTGCTCTCGCCGATGAGTCATGTGAGGAGCCAAAG 380 Query 351 ATCAGAATGAATAAGGTTGTAAGGTCTAACTTGAGGGTTAGGCTGGGAGATGTTATTTCT 410 ||||||||||| || || || || ||||||||||||||||| |||||||||||||||||| Sbjct 381 ATCAGAATGAACAAAGTAGTCAGATCTAACTTGAGGGTTAGACTGGGAGATGTTATTTCT 440 Query 411 GTTCACCAATGCCCAGATGTCAAGTATGGAAAGCGTGTTCACATCTTGCCTGTTGATGAT 470 ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct 441 GTTCACCAATGCCCAGACGTCAAGTACGGAAAGCGTGTGCACATCTTGCCTGTTGATGAT 500 Query 471 ACAGTTGAAGGCGTTACTGGAAACCTCTTTGATGCTTACCTGAAACCTTACTTT-CTGGA 529 || |||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 501 ACTGTTGAAGGAGTGACTGGAAACCTCTTTGATGCTTACCTGAAACCTTA-TTTCCTGGA 559 Query 530 GGCGTACCGTCCAGTGAGGAAGGGAGATCTTTTCCTAGTGAGAGGAGGAATGAGGAGTGT 589 ||| |||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct 560 GGCATACCGTCCAGTGAGGAAGGGTGATCTCTTCCTAGTCAGAGGAGGCATGAGGAGTGT 619 Query 590 GGAGTTCAAAGTGATCGAGACTGATCCTGCTGAGTACTGTGTGGTGGCTCCAGATACAGA 649 |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| ||||| Sbjct 620 GGAGTTCAAAGTCATAGAGACAGATCCTGCTGAGTACTGCGTGGTTGCTCCAGACACAGA 679 Query 650 GATTTTCTGTGAGGGTGAACCAGTTAAGAGGGAGGACGAAGAAAGGCTTGATGAGGTTGG 709 |||||||||||||||||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct 680 GATTTTCTGTGAGGGTGAGCCTGTGAAGAGAGAGGATGAAGAAAGGCTAGATGATGTAGG 739 Query 710 TTATGACGATGTTGGTGGTGTCAGGAAACAGATGGCTCAGATTAGGGAA-TTGGTTGAAC 768 |||||| |||||||| |||||||||||||||||||||||||| || ||| || ||||||| Sbjct 740 TTATGATGATGTTGGCGGTGTCAGGAAACAGATGGCTCAGATCAGAGAACTT-GTTGAAC 798 Query 769 TTCCCTTGAGGCATCCACAACTCTTTAAATCAATTGGTGTGAAGCCACCAAAGGGAATTC 828 ||||||||||||||||||| || || || ||||||||||| ||||||||||||||||||| Sbjct 799 TTCCCTTGAGGCATCCACAGCTATTCAAGTCAATTGGTGTTAAGCCACCAAAGGGAATTC 858 Query 829 TGCTTTACGGACCTCCTGGATCCGGGAAGACTCTT-ATTGCTCGTGCTGTGGCTAATGAA 887 | ||||| ||||| ||||| ||||| |||||| || |||||||||||||||||||||||| Sbjct 859 TTCTTTATGGACCACCTGGGTCCGGAAAGACT-TTGATTGCTCGTGCTGTGGCTAATGAA 917 Query 888 ACCGGAGCATTCTTCTTCTGTATCAATGGACCGGAAATCATGTCGAAACTAGCTGGTGAG 947 || || || || |||||||||||||| ||||| || |||||||| ||||| ||||||||| Sbjct 918 ACTGGTGCCTTTTTCTTCTGTATCAACGGACCTGAGATCATGTCCAAACTGGCTGGTGAG 977 Query 948 AGTGAGAGCAACCTCAGGAAAGCATTTGAGGAGGCTGAGAAGAATGCCCCGTCTATCATA 1007 ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| Sbjct 978 AGTGAGAGCAACCTCAGGAAAGCATTTGAGGAGGCTGAGAAAAATGCCCCTTCAATCATA 1037 Query 1008 TTCATTGATGAGATTGACTCTATTGCACCAAAAAGAGAGAAGACGAATGGTGAGGTTGAG 1067 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 1038 TTCATTGATGAGATTGACTCTATTGCACCCAAAAGAGAGAAGACGAATGGCGAGGTTGAG 1097 Query 1068 AGGAGGATTGTCTCTCAGCTCCTTACGCTTATGGATGGACTAAAATCACGTGCCCATGTT 1127 ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||| Sbjct 1098 AGGAGGATTGTGTCTCAGCTGCTTACGCTTATGGATGGACTGAAATCGCGTGCTCATGTT 1157 Query 1128 ATTGTTATGGGAGCAACAAATCGTCCCAACAGTATTGATCCGGCTTTGAGAAGGTTTGGA 1187 ||||| ||||||||||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct 1158 ATTGTCATGGGAGCAACCAATCGCCCCAACAGTATCGACCCAGCTTTGAGAAGGTTTGGA 1217 Query 1188 AGATTCGACAGGGAAATTGATATCGGTGTTCCTGATGAAATTGGACGTCTTGAAGTTCTT 1247 ||||| |||||||| || ||||| || |||||||| ||||||||||||||||||||||| Sbjct 1218 AGATTTGACAGGGAGATCGATATTGGGGTTCCTGACGAAATTGGACGTCTTGAAGTTCTG 1277 Query 1248 AGGATCCACACGAAGAACATGAAGCTAGCTGAAGATGTTGATCTAGAAAGAATCTCCAAG 1307 |||||||| || |||||||||||||| ||||||||||| ||||| ||||| ||||| ||| Sbjct 1278 AGGATCCATACAAAGAACATGAAGCTTGCTGAAGATGTGGATCTCGAAAGGATCTCAAAG 1337 Query 1308 GACACGCATGGATATGTTGGAGCTGATCTTGCAGCTCTATGCACTGAAGCTGCCCTTCAA 1367 || || || || || || || ||||||||||||||| | ||||| || || ||||| ||| Sbjct 1338 GATACACACGGTTACGTCGGCGCTGATCTTGCAGCTTTGTGCACAGAGGCCGCCCTGCAA 1397 Query 1368 TGTATCAGAGAGAAGATGGATGTGATTGACTTGGAAGATGACTCAATTGACGCCGAAATC 1427 || ||||| |||||||||||||||||||| |||||||||||||| || || || |||||| Sbjct 1398 TGCATCAGGGAGAAGATGGATGTGATTGATTTGGAAGATGACTCCATAGATGCTGAAATC 1457 Query 1428 CTCAATTCCATGGCTGTGTCTAATGAACACTTCCACACTGCTCTTGGAAACAGCAACCCA 1487 |||||||||||||| ||| |||||||||| |||||||||||||| || |||||||||||| Sbjct 1458 CTCAATTCCATGGCAGTGACTAATGAACATTTCCACACTGCTCTCGGGAACAGCAACCCA 1517 Query 1488 TCCGCCCTTCGTGAAACTGTTGTGGAGGTTCCAAATGTCTCCTGGGAGGATATTGGAGGT 1547 || || |||||||||||||||||||| ||||| || ||||| ||| | |||||||||||| Sbjct 1518 TCTGCACTTCGTGAAACTGTTGTGGAAGTTCCCAACGTCTCTTGGAATGATATTGGAGGT 1577 Query 1548 CTCGAGAATGTTAAGAGAGAGCTTCAGGAGACTGTTCAATACCCTGTGGAGCATCCAGAG 1607 || |||||||| |||||||||||||||||||||||||||||||| || || || |||||| Sbjct 1578 CTTGAGAATGTCAAGAGAGAGCTTCAGGAGACTGTTCAATACCCAGTCGAACACCCAGAG 1637 Query 1608 AAATTCGAGAAGTTTGGTATGTCTCCATCAAAGGGAGTTCTTTTCTACGGTCCTCCTGGA 1667 || || ||||| || || |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1638 AAGTTTGAGAAATTCGGGATGTCTCCATCAAAGGGAGTACTTTTCTACGGTCCTCCTGGA 1697 Query 1668 TGTGGTAAAACCCTGTTAGCCAAAGCTATAGCAAACGAGTGCCAAGCAAACTTCATCAGT 1727 ||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||||| Sbjct 1698 TGTGGGAAAACTCTTTTGGCCAAAGCTATTGCCAACGAGTGCCAAGCTAATTTCATCAGT 1757 Query 1728 GTCAAGGGACCCGAGCTTCTCACAATGTGGTTTGGAGAAAGTGAAGCCAACGTCCGAGAA 1787 |||||||| ||||||||||| || |||||||||||||| |||||||| || ||||| ||| Sbjct 1758 GTCAAGGGTCCCGAGCTTCTGACGATGTGGTTTGGAGAGAGTGAAGCGAATGTCCGTGAA 1817 Query 1788 ATCTTTGACAAGGCTCGTCAATCTGCTCCTTGTGTTCTGTTT-TTCGATGAGCTAGACTC 1846 ||||| |||||||| |||||||| ||||| |||||||| ||| ||||||||||| ||||| Sbjct 1818 ATCTTCGACAAGGCCCGTCAATCCGCTCCATGTGTTCT-TTTCTTCGATGAGCTTGACTC 1876 Query 1847 CATTGCTACTCAGAGAGG-GAACAGC-GCGG-GT-GATGCCGGCGGTGCAGCTGACAGAG 1902 |||||| ||||||||||| | | | | || | |||| ||||| || || || |||| Sbjct 1877 CATTGCGACTCAGAGAGGAGG-CGGAAGTGGAGGCGATGGAGGCGGCGCTGCGGATAGAG 1935 Query 1903 TGTTGAATCAGCTTTTGACAGAAATGGATGGAATGAATGCAAAGAAGACGGTATTCATTA 1962 ||||||| ||||||||||| || |||||||||||||| || ||||| || || ||||| | Sbjct 1936 TGTTGAACCAGCTTTTGACTGAGATGGATGGAATGAACGCCAAGAAAACTGTCTTCATCA 1995 Query 1963 TTGGAGCAACTAACAGACCGGATATCATAGATTCAGCTCTTCTTCGACCTGGAAGACTCG 2022 |||||||||| |||||||| || || || ||||| |||||||| || |||||||| || | Sbjct 1996 TTGGAGCAACCAACAGACCTGACATTATCGATTCGGCTCTTCTCCGTCCTGGAAGGCTTG 2055 Query 2023 ACCAGCTTATCTACATTCCTCTACCTGATGAAGATTCCCGTCTCAATATCTTTAAGGCCT 2082 ||||||| || |||||||| ||||| || || |||||||||||||||||||| |||||| Sbjct 2056 ACCAGCTCATTTACATTCCACTACCAGACGAGGATTCCCGTCTCAATATCTTCAAGGCC- 2114 Query 2083 GC-TTGAGAAAATCTCCCGTCGCTAAAGATGTAGATGTTACTGCACTCGC-AAAGTACAC 2140 || ||||| |||||||| | ||||||||||| || | |||||||||| ||| ||||| Sbjct 2115 GCCTTGAGGAAATCTCCTATTGCTAAAGATGTTGACATCGCTGCACTCGCTAAA-TACAC 2173 Query 2141 TCAGGGATTCAGTGGTGCTGATATCACCGAGATCTGCCAGAGAGCTTGCAAGTACGCCAT 2200 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 2174 TCAGGGATTCAGTGGTGCTGATATCACTGAGATTTGTCAGAGAGCTTGCAAGTACGCCAT 2233 Query 2201 CAGAGAAAACATCGAAAAGGATATTGAGAACGAGC-GTAGAAGGAGCCAGAATCCAGAGG 2259 |||||||||||| || ||||| ||||| || ||| | || |||||| |||| ||||||| Sbjct 2234 CAGAGAAAACATTGAGAAGGACATTGAAAAGGAGAAG-AGGAGGAGCGAGAACCCAGAGG 2292 Query 2260 CCATGGAGGAAGATATG-GTGGATGATGAAGTTTCAGAGATTAGAGCTGCTCA-TTTCGA 2317 | |||||||||||| | |||||||| | || |||||||| | |||||| || ||| || Sbjct 2293 CAATGGAGGAAGATG-GAGTGGATGA--A-GTATCAGAGATCAAAGCTGCACACTTT-GA 2347 Query 2318 AGAGTCGATGAAATATGCAAGGAGAAGTGTGAGTGATGCTGATATTC-GCAAGTACCAAG 2376 ||||||||||| |||||| | || |||||||||||||| || || | | |||||||||| Sbjct 2348 GGAGTCGATGAAGTATGCACGTAGGAGTGTGAGTGATGCAGACAT-CAGGAAGTACCAAG 2406 Query 2377 CTTTTGCTCAGACGCTGCAGCAATCCAGAGGGTTTGGATCTGAGTTCAGGTTTGACTCAA 2436 |||||||||||||| ||||||| || |||||||| || ||||| |||||||| || || Sbjct 2407 CTTTTGCTCAGACGTTGCAGCAGTCTAGAGGGTTCGGTTCTGAATTCAGGTTCGAG--AA 2464 Query 2437 C-C-GCTGGTGTC-GGACGC-ACCACTGGTGTTGCAGCCGCCGATCCCTTTGCCACTTCT 2492 | |||||| || || || |||||||| ||||||| |||| |||||||| ||| Sbjct 2465 TTCTGCTGGT-TCAGGT-GCCACCACTGGAGTTGCAG------ATCCGTTTGCCACGTCT 2516 Query 2493 GCAGCTGCAGCTGATGACGACGAT---CTCTACAGTTAG 2528 ||||| || |||| ||||| ||| ||||||| |||| Sbjct 2517 GCAGCCGCTGCTGGGGACGATGATGATCTCTACAATTAG 2555 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100748698025 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5