BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G04720.1 Length=2691 Score E Sequences producing significant alignments: (Bits) Value Ahg487251 jgi|Araly1|487251|fgenesh2_kg.6__385__AT5G04720.1 3707 0.0 Ahg473526 jgi|Araly1|473526|fgenesh2_kg.1__3480__AT1G33560.1 1009 0.0 > Ahg487251 jgi|Araly1|487251|fgenesh2_kg.6__385__AT5G04720.1 Length=2605 Score = 3707 bits (2007), Expect = 0.0 Identities = 2328/2484 (94%), Gaps = 17/2484 (1%) Strand=Plus/Plus Query 11 CTCTCTTTTTCTCATCGGCCTTTGCCATGGCAGATATAATCGGCGGCGAAGTTGTGACGG 70 |||||| ||||||||||| | || ||||||||||||| |||||||||||||||||||||| Sbjct 1 CTCTCTCTTTCTCATCGG-CGTTCCCATGGCAGATATCATCGGCGGCGAAGTTGTGACGG 59 Query 71 AGCTCGTGAGGCAGCTCTATGCGGTTTCTCAAAAAACCCTCAGATGCAGAGGCATCGCCA 130 ||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 60 AGCTCGTAAAGCAGCTCTATGCGGTATCTCAAAAAGCCCTCAGATGCAGAGGCATCGCCA 119 Query 131 AAAATCTCGCCACCATGATCGATGGTCTTCAACCAACGATCAAGGAGATCCAATACAGCG 190 |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct 120 AAAATCTCGCCACCATGATCGAGGGTCTTCAACCTACGATCAAGGAGATTCAATATAGCG 179 Query 191 GCGTCGAGCTCA-CACCTCATCGCCAGGCTCAGTTGCGTATGTTCTCGGAAACCTTAGAC 249 |||||||||||| | ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 180 GCGTCGAGCTCAGC-CCTCATCGCCAGGCTCAATTGCGTATGTTCTCAGAAACCTTAGAC 238 Query 250 AAGTGTAGGAAGCTCACCGAGAAAGTTCTTAAATCCAGCCGTTGGAACATGGTTAGACAG 309 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 239 AAGTGTAGGAAGCTCACCGAGAAAGTTCTCAAATCCAGCCGTTGGAACATGGTTCGACAG 298 Query 310 CTAC-TCCATGTTAGGAAAATGGAGAATCTTCAGAGTAAAGTGTCTAGCTTTCTCAACGG 368 | | ||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||| Sbjct 299 GT-CATCCATGTTAGGAAAATGGAGAGTCTCCAGAGTAAAGTCTCTAGCTTTCTTAACGG 357 Query 369 TCAATTGTTAGTCCATGTTCTCGCTGATGTTCATCATGTTCGAGCCGATTC-TGAATTCC 427 |||||||||||||||||||| |||||||||||||||||||||| |||| | || || Sbjct 358 CCAATTGTTAGTCCATGTTCTTGCTGATGTTCATCATGTTCGAGTCGATACGGGAGTT-- 415 Query 428 GG-TTCGATCGGATTGATAGGAAGGTTGATAGTTTGAATGAGAAGCTTGGTTCTATGAAA 486 || ||||||||||||||||||||||||||| | |||||||||| | |||||||||||||| Sbjct 416 GGATTCGATCGGATTGATAGGAAGGTTGATTGCTTGAATGAGATGTTTGGTTCTATGAAA 475 Query 487 CTCAGGGGAAGTGAATCGTTGCGTGAGGCGTTGAAGACGGCCGAGGCTACCGTTGAGATG 546 |||||||||||||||| |||| ||||| ||||||| || ||||||||| | |||||| Sbjct 476 ATCAGGGGAAGTGAATCCATGCGGGAGGCCTTGAAGATGGAGGAGGCTACCATGGAGATG 535 Query 547 GTGACAACCGATGGTGCTGATTTGGGGGTGGGA-TTGGATTTGGGAAAGAGGAAGGTGAA 605 |||| || |||| |||||||||||| | | | ||||||||||||||||| |||||||| Sbjct 536 GTGATGACTGATGCTGCTGATTTGGGAG-GAAATTTGGATTTGGGAAAGAGCAAGGTGAA 594 Query 606 GGAGATGTTGTTTAAATCCATTGATGGGGAAAGACTTATTGGTATCTCTGGGATGAGTGG 665 |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct 595 GGAGATGTTGTTTAAATCCAATGATGATGAAAGACTTATCGGTATCTCAGGGATGAGTGG 654 Query 666 TTCAGGGAAAACCACTCTTGCCAAAGAGCTTGCCCGGGACGAGGAGGTTCGAGGCCACTT 725 ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct 655 TTCAGGGAAAACCACTCTTGCCAAAGAGCTTGCACGGGACGAAGAAGTTCGAGGCCACTT 714 Query 726 TGGGAACAAGGTTTTGTTTCTGACTGTGTCACAATCTCCCAATCTTGAGGAGCTTAGAGC 785 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 715 TGGGAACAACGTTTTGTTTCTGACTGTGTCACAATCTCCCAATCTTGAGGAGCTTAGAGC 774 Query 786 CCATATATGGGGATTTCTTACTAGTTATGAGGCTGGGGTTGGTGCTACTCTTCCAGAATC 845 |||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct 775 CCATATATGGGGATATCTTACTAGTTATGAGGCTGGGGCTGGTGCCACTCTTCCGGAATC 834 Query 846 GAGGAAGCTAGTGATCCTTGATGATGTTTGGACAAGGGAATCTCTGGACCAGCTGATGTT 905 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 835 TAGGAAGCTAGTGATCCTTGATGATGTTTGGACAAGGGAATCTCTGGACCAGCTCATGTT 894 Query 906 CGAAAATATTCCTGGAACCACAACTCTTGTGGTCTCACGGTCTAAACTCGCAGATTCTAG 965 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 CGATAATATTCCTGGAACCACAACTCTTGTGGTCTCACGGTCTAAACTCGCAGATTCTAG 954 Query 966 AGTCACTTATGATGTAGAGTTACTCAATGAACATGAAGCAACGGCCCTGTTCTGTCTCTC 1025 || |||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||| Sbjct 955 AGCCACTTATGATGTAGAGTTACTCAATGAACACGAAGCAACGTCTCTGTTCTGTGTCTC 1014 Query 1026 TGTTTTCAATCAGAAATTAGTGCCTTCAGGGTTCAGCCAAAGTTTGGTCAAGCAGGTTGT 1085 || |||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||| Sbjct 1015 TGCTTTCAACCAGAAATCAGTGCCTTCAGGATTCAGTAAAAGTTTGGTCAAGCAGGTTGT 1074 Query 1086 TGGGGAGTGTAAAGGTCTACCTTTGTCTCTGAAAGTCATTGGTGCTTCATTGAAAGAACG 1145 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 1075 TGGGGAGTGTAAAGGTCTACCTTTGGCTCTGAAAGTCATCGGTGCTTCATTGAAAGAACG 1134 Query 1146 ACCTGAAAAATATTGGGAAGGTGCAGTGGAGAGGCTATCAAGAGGTGAACCTGCTGATGA 1205 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 1135 ACCTGAAAAATATTGGGAAGGTGCAGTAGAGAGGTTATCAAGAGGTGAACCTGCTGATGA 1194 Query 1206 AACTCATGAGAGTAGAGTGTTTGCTCAAATCGAAGCAACTCTAGAAAATCTTGACCCTAA 1265 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 AACGCATGAGAGTAGAGTTTTTGCTCAAATCGAAGCAACTCTAGAAAATCTTGACCCTAA 1254 Query 1266 AACCAGAGATTGTTTCTTGGTTCTCGGTGCTTTCCCTGAAGATAAGAAGATCCCTCTTGA 1325 ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1255 AACCAGAGAGTGTTTCTTGGTTCTGGGTGCTTTCCCTGAAGACAAGAAGATCCCTCTTGA 1314 Query 1326 TGTTCTCATCAACGTGTTGGTTGAGTTGCATGATCTCGAGGATGCAACTGCTTTTGCTGT 1385 |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct 1315 TGTTCTCATCAACGTGTTAGTCGAGTTGCATGATCTCGAGGACGCAACTGCTTTTGCTGT 1374 Query 1386 TATTGTTGATTTAGCAAACAGGAATCTCCTTACTCTTGTGAAAGATCCAAGGTTTGGACA 1445 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1375 TATTGTTGATTTAGCAAACAGGAATCTCCTTACTCTCGTGAAAGATCCAAGGTTTGGCCA 1434 Query 1446 TATGTACACTAGCTACTATGATATATTTGTCACGCAGCATGATGTTCTAAGAGATGTAGC 1505 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1435 TATGTACACTAGCTACTATGATATATTTGTGACGCAGCATGATGTTCTAAGAGATGTAGC 1494 Query 1506 ACTTCGTCTTAGCAATCATGGGAAAGTAAATAACAGAGAGCGGTTATTGATGCCAAAAAG 1565 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 1495 ACTTCGTCTTAGCAATCTTGGGAAAGTAAATAACAGAGAGCGATTATTGATGCCAAAAAG 1554 Query 1566 AGAGTCAATGCTTCCGAGAGAATGGGAGAGGAACAATGATGAGCCATACAAAGCCAGAGT 1625 ||||||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct 1555 AGAGTCAATACTTCCAAGAGAATGGGAGAGAAACAATGATGAGGCATACAAAGCCAGAGT 1614 Query 1626 AGTTTCCATTCACACAGGAGAAATGACTCAGATGGATTGGTTTGACATGGAACTCCCTAA 1685 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1615 AGTTTCCATTCACACAGGAGAAATGACTGAGATGGATTGGTTTGACATGGAACTCCCTAA 1674 Query 1686 GGCTGAAGTTTTGATACTACACTTCTCTTCTGACAAGTATGTATTGCCTCCTTTCATTGC 1745 |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 1675 GGCTGAAGTTTTGATACTACACTTTTCTTCTGAAAAGTATGTGTTGCCTCCTTTCATTGC 1734 Query 1746 TAAGATGGGCAAGCTTACAGCGCTCGTGATCATCAACAATGGTATGTCTCCTGCGCGTCT 1805 ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 1735 TAAGATGGGCAAGCTTAGGGCGCTCGTGATCATCAACAATGGTATGTCTCCAGCGCGTCT 1794 Query 1806 ACATGACTTCTCCATCTTTACCAATTTGGCCAAACTCAAGAGTCTCTGGCTTCAGAGGGT 1865 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1795 ACATGACTTCTCCATCTTTACCAATTTGGCCAAACTCAAGAGTCTCTGGCTTGAGAGGGT 1854 Query 1866 TCATGTCCCTGAACTCTCTAGCAGTACAGTGCCCTTGCAAAACCTCCACAAGCTGTCTCT 1925 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1855 TCATGTCCCTGAACTCTCTAGCAGTACAGTGCCATTGCAAAACCTCCACAAGCTGTCTCT 1914 Query 1926 CATATTCTGCAAGATCAACACTAGTCTTGATCAGACAGA-GCTAGACATTGCCCAAATCT 1984 ||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1915 CATCTTCTGCAAGATCAACACTAGTCTTGATCAGACAGAAG-TAGACATTGCCCAAATCT 1973 Query 1985 TCCCAAAATTGTCTGATCTTACAATAGATCATTGTGATGATCTTCTGGAACTACCTTCGA 2044 ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct 1974 TCCCAAAATTGTCTGATCTCACAATAGATCATTGCGATGATCTTGTGGAACTACCTTCGA 2033 Query 2045 CCATCTGTGGAATCACCTCTCTCAATTCCATCAGCATAACAAATTGTCCCCGCATCAAGG 2104 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2034 CCATCTGTGGTATCACCTCTCTCAACTCCATCAGCATAACAAATTGTCCCCGCATCAAAG 2093 Query 2105 AATTGCCTAAGAATCTGAGTAAGCTAAAAGCCCTTCAGCTTCTGAGGCTATACGCTTGCC 2164 ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 2094 AATTGCCTAAGTATCTCAGTAAGCTAAAATTCCTTCAGCTTCTGAGGCTATACGCTTGCC 2153 Query 2165 ATGAGCTG-AATTCTCTGCCTGTGGAAATCTGTGAACTGCCAAGACTAAAGTATGTTGAC 2223 ||||||| ||| ||||||| || ||| ||||||| ||||||||| ||||||| ||||| Sbjct 2154 CTGAGCTGCAAT-CTCTGCCAGTAGAACTCTGTGAGCTGCCAAGATTAAAGTACCTTGAC 2212 Query 2224 ATTTCTCAATGTGTCAGCCTGAGTTCTCTTCCGGAAAAGATAGGAAAGGTAAAGACACTT 2283 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2213 ATCTCTCAATGTGTCAGCCTGAGTTCTCTTCCGGAAAAGATAGGAAAGGTTAAGACACTT 2272 Query 2284 GAGAAAATCGACACGAGGGAATGCAGCTTATCGAGCATACCAAACTCTGTGGTTTTATTG 2343 ||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| |||| Sbjct 2273 GAGAAAATCGACATGAGGGAATGCAGCTTATCAAGCATACCAAGCTCTGCGGTTTCATTG 2332 Query 2344 ACTTCTCTACGCCATGTAATATGCGATAGAGAGGCTTTATGGATGTGGGAAAAGGTCCAG 2403 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 2333 ACTTCTCTACGCCATGTAATATGCGATAGAGAGGCTTTGTGGATGTGGGAAAAGGTCGAG 2392 Query 2404 AAGGCGGTTGCAGGACTTCGTGTTGAAGCTGCGGAAAAATCTTTCAGCAG-GGATTGGCT 2462 ||||| ||| |||||||||| ||||||||||||||||||||||||||| | ||||||||| Sbjct 2393 AAGGCCGTTACAGGACTTCGCGTTGAAGCTGCGGAAAAATCTTTCAGC-GTGGATTGGCT 2451 Query 2463 CGACGATTAGGTTCGTGATTCTCT 2486 |||||| ||||||| ||||||||| Sbjct 2452 CGACGAGTAGGTTCTTGATTCTCT 2475 > Ahg473526 jgi|Araly1|473526|fgenesh2_kg.1__3480__AT1G33560.1 Length=2824 Score = 1009 bits (546), Expect = 0.0 Identities = 1518/1969 (77%), Gaps = 139/1969 (7%) Strand=Plus/Plus Query 573 GGTGGGATTGGATTTGGGAAAGAGGAAGGTGAAGGAGATGTTGTTTAAATCCATTGATGG 632 ||| |||||||||||||| ||||| ||||||||||||||| ||||||| | || | || Sbjct 810 GGTAGGATTGGATTTGGGGAAGAGAAAGGTGAAGGAGATGATGTTTAAGT---TT-ACGG 865 Query 633 GGAAAGACTT-ATTGGTATCTCTGGGATGAGTGGTTCAGGGAAAACCACTCTTGCCAA-A 690 | | | || |||| |||||||| ||||| |||||||||||||||||||||| ||| | Sbjct 866 ATACATATTTGTTTGGGATCTCTGGAATGAGCGGTTCAGGGAAAACCACTCTTG-CAATA 924 Query 691 GAGCTTGCCCGGGACGAGGAGGTTCGAGGCCACTTTGGGAACAAGGTTTTGTTTCTGACT 750 |||||| | | ||||| || |||||||||| |||| |||||||||||||||||||| | Sbjct 925 GAGCTTTCAAGAGACGATGATGTTCGAGGCCTCTTTAAGAACAAGGTTTTGTTTCTGATT 984 Query 751 GTGTCACAATCTCCCAATCTTGAGGAGCTTAGAG-CCCATATATGGGGATTTCTTACTAG 809 ||||||| ||||| ||| ||||| | | | ||| |||| | | ||||| | || Sbjct 985 GTGTCACGGTCTCCGAATTTTGAGAATC-TGGAGTTTTGTATACGAGAATTTC-T--TA- 1039 Query 810 TTATGAGGCTGGGGTTGGTGCTACTCTTCCAGAATCGAGGAAGCTAGTGATCCTTGATGA 869 |||| ||| | | | | | | || | |||||||||||||||||||||| Sbjct 1040 --ATGA---TGGAG-T--T-C-A-------ACAA-C--GGAAGCTAGTGATCCTTGATGA 1079 Query 870 TGTTTGGACAAGGGAATCTCT-GGACCAGCTGATGTTCGAAAATATTCCTGGAACCACAA 928 |||||||||||||||||| || |||| ||||| ||| | ||||| | | ||||| ||||| Sbjct 1080 TGTTTGGACAAGGGAATC-CTTGGACAAGCTGTTGT-CTAAAAT-T-CGTGGAAGCACAA 1135 Query 929 CTCTT-GTGGTCTCACGGTCTAAACTCGCAGATTCTAGAGTCACTTATGATGTAGAGTTA 987 || || || ||||||||||| || || |||||| ||||| ||| || |||| || ||| Sbjct 1136 CT-TTAGTAGTCTCACGGTCCAAGCTTGCAGATCCTAGAACCACCTACAATGTGGAATTA 1194 Query 988 CTCAATGAACATGAAGCAACGGCCCTGTTCTGTCTCTCTGTTTTCAATCAGAAATTAGTG 1047 | || ||| ||||||||| | |||| || ||||||| || |||| |||| || | | Sbjct 1195 TTAAAGGAAGATGAAGCAATGTCCCTCTTGTGTCTCTATGCTTTCGATCATAAGTCCCCG 1254 Query 1048 CCTTCAGGGTTCAGCCAAAGTTTGGTCAAGCAGGTTGTTGGGGAGTGTAAAGGTCTACCT 1107 ||||| |||||| ||| ||||| ||||||||||||| |||||||||||| ||||| Sbjct 1255 CCTTCTCCATTCAGCAAAAAATTGGTGAAGCAGGTTGTTGATGAGTGTAAAGGTTTACCT 1314 Query 1108 TTGTCTCTGAAAGT-CATTGGTGCTTCATTGAAAGAACGA-CCTGAAAAATATTGGGAAG 1165 || ||| ||||||| | | |||||||| || ||| ||| | ||||||| ||||||||||| Sbjct 1315 TTATCTTTGAAAGTTC-TCGGTGCTTCTTTAAAA-AACAAACCTGAAAGATATTGGGAAG 1372 Query 1166 GTGCAGTGGAGAGGCTATCAAGAGGTGAACCTGCTGATGAAACTCATGAGAGTAGAGTGT 1225 | | |||| ||||| ||| |||||| ||| ||||||||||||||||||||| ||||||| Sbjct 1373 GCGTAGTGAAGAGGTTATTAAGAGGAGAAGCTGCTGATGAAACTCATGAGAACAGAGTGT 1432 Query 1226 TTGCTCAAATCGAAGCAACTCTAGAAAATCTTGACCCTAAAACCAGAGATTGTTTCTTGG 1285 ||||||| || |||| || ||||||||| || || | |||| |||||| |||||||||| Sbjct 1433 TTGCTCATATGGAAGAAAGTCTAGAAAACCTCGAGTCGAAAATCAGAGAGTGTTTCTTGG 1492 Query 1286 TTCTCGGTGCTTTCCCTGAAGATAAGAAGATCCCTCTTGATGTTCTCATCAACGTGTTGG 1345 | | |||||||||||||||| ||||||||||||||| ||||||||| |||||||| || Sbjct 1493 ATATGGGTGCTTTCCCTGAAGGCAAGAAGATCCCTCTTTATGTTCTCACCAACGTGTGGG 1552 Query 1346 TTGAGTTGCATGATCTCGAGGATGCA-ACTGC-TTTTGCTGTTATTGTT-GATTTAGCAA 1402 ||||| ||||||| | || || | | ||||| |||| || || || || | |||||| Sbjct 1553 TTGAGAGGCATGATATTGACGAAG-AGACTGCGTTTTCCT-TTGTTCTTCG-TTTAGCTG 1609 Query 1403 ACAGGAATCTCCTTACTCTTGTGAAAGATCCAAGGTTTGGAC-ATATGTACACTAGCTAC 1461 ||| ||||||||| ||| | |||||| ||||||||||||| | || || ||| | ||||| Sbjct 1610 ACAAGAATCTCCTGACTATAGTGAAAAATCCAAGGTTTGG-CGATGTGCACATTGGCTAC 1668 Query 1462 TATGATATATTTGTCACGCAGCATGATGTTCTAAGAGATGTAGCACTTCGTCT-TAGCAA 1520 |||||| ||||||| ||||| || |||||||| ||||| |||| |||| | | | ||| Sbjct 1669 TATGATGTATTTGTGACGCAACACGATGTTCTCAGAGACCTAGCCCTTCATATGTC-CAA 1727 Query 1521 TCATG-GGAAAGTAAATAACAGAGAGCGGTTATTGATGCCAAAAAGAGAGTCAATGCTTC 1579 || || ||| ||||||| |||||||||||||| ||||| ||||||||| ||||||||| Sbjct 1728 TCGTGTGGAC-GTAAATAGGAGAGAGCGGTTATTAATGCCGAAAAGAGAGCCAATGCTTC 1786 Query 1580 CGAGAGAATGGGAGAGGAACAATGATGAGCCATACAAAGCCA-GAGTAGTTTCCATTCAC 1638 | ||||||||||| | ||| || |||||||||| | |||| || |||| ||| |||| Sbjct 1787 CAAGAGAATGGGAAAAGAATAACGATGAGCCATTTGATGCCAAGA-TAGTCTCCCTTCAT 1845 Query 1639 ACAGG-A-GAA--ATG-A-CTC-AGATGGATT-GGT----T---TGACATGGA------- 1676 ||||| | ||| || | || | ||| ||| || | ||| ||||| Sbjct 1846 ACAGGCAAGAATTATTTAACTTTAAATGAATTTGGGGAAATGGATGAAATGGATTGGTTT 1905 Query 1677 -AC-T---CC--C-TAAGGCTGAAGTTTTGATACT-ACACTTCTCTTCTGACAAGTATGT 1727 || | || | |||||| |||||||| ||||| | ||||||||||||| || || || Sbjct 1906 GACATGGACCTTCCTAAGGCAGAAGTTTTAATACTGA-ACTTCTCTTCTGAAAACTACGT 1964 Query 1728 ATTGCCTCC-TTTCATTGCTAAGATGGGCA-AGCTTACAGCGCTCGTGATCATCAACAAT 1785 ||||| || ||| |||| ||||||| | | | || | | ||||||||| ||||||||| Sbjct 1965 CTTGCCACCATTT-ATTGGTAAGATGAGTAGA-CTCAGGGTGCTCGTGATTATCAACAAT 2022 Query 1786 GGTATGTCTCCTGCGCGTCTACATGACTTCTCCATCTTTACCAATTTGGCCAAACTCAAG 1845 || |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| Sbjct 2023 GGAATGTCTCCTGCGCGTCTACATGGCTTCTCCATCTTTGCCAATTTGGCCAAACT-AAG 2081 Query 1846 A-GTCTCTGGCTTC-AGAGGGTTCATGTCCCTGAACTCT-CTAGCAGTAC-AGTGCC-CT 1900 | |||||||||| | ||||||| |||||||||||| | | | ||||| || | | || || Sbjct 2082 AAGTCTCTGGCT-CGAGAGGGTACATGTCCCTGAATT-TACCAGCAGCACCATT-CCACT 2138 Query 1901 TGCAAAACCTCCACAAGCTGTC-TCTCATATTCTGCAAGATCAACACTAGTCTT-GATCA 1958 | |||| || || ||| || | ||| || || || ||| |||||| ||| ||| ||||| Sbjct 2139 -GAAAAAACTGCAAAAGATG-CATCTGATCTTTTGTAAGGTCAACAATAG-CTTTGATCA 2195 Query 1959 GACAGAGC-TA-GACAT-TGCCCAAATCTTCCCAAAATTGTCTGATCTTACAATAGATCA 2015 ||| | | | ||||| | | ||||| ||||||| ||||||||||| || || ||||| Sbjct 2196 GAC-GT-CATTCGACATCT-CACAAATATTCCCAAGCTTGTCTGATCTCACTATCGATCA 2252 Query 2016 TTGTGATGATCTTCTGGAACTAC-CTTCGACCATCTGTGGAATCACCTCTCTCAATTC-C 2073 |||||||||||| ||||| || || | | || || ||| | ||||||||||| || | Sbjct 2253 CTGTGATGATCTTGTGGAATTAAACTCC-AT-ATTTG-GGA-TAACCTCTCTCAACTCTC 2308 Query 2074 ATCAGCATAACAAATTGTCCCCGCAT-CAAGGAATTGCCTAAGAATCTGAGTAAGCTAAA 2132 |||||||||| || ||||| | || | | || |||| |||||||||||||| ||| | Sbjct 2309 -TCAGCATAACCAACTGTCCAAGAATTCTTG-AACTGCCCAAGAATCTGAGTAATCTACA 2366 Query 2133 AGCC-CTTCAGCTTCTGAGGCTATACGCTTGCCATGAGCTGA-ATTCTCTGCCTGTGGAA 2190 | | ||| | | ||| ||| |||| ||||||| ||||||| || | || || || ||| Sbjct 2367 -GTCTCTTGAACGTCTAAGGTTATATGCTTGCCCCGAGCTGATATCC-CTCCCGGTCGAA 2424 Query 2191 ATCTGTGAACTGCCAAGACTAAAGTATGTTGACATTTCTCAATGTGTCAGCCTGAGTTCT 2250 || ||||| |||||| | |||||||| ||||| ||||| || ||||||||||||| || | Sbjct 2425 ATTTGTGAGCTGCCATGTCTAAAGTACGTTGATATTTCACAGTGTGTCAGCCTGATTTAT 2484 Query 2251 CTTCCGGAAAAGATAGGAAAGGTAAAGACACTTGAGAAAATCGACACGAGGGAATGCAGC 2310 ||||| |||||| | |||||| || || |||||||||||| |||| | | |||||||| Sbjct 2485 CTTCCTGAAAAGTTTGGAAAGCTAGGGAAACTTGAGAAAATTGACATGCGAGAATGCAGT 2544 Query 2311 TTATCGAGCATACCAAACTCTGTGGTTTTATT-GACTTCTCTACGCCATGTAATATGCGA 2369 |||| | | |||||| ||||| | | | | | ||||||| ||||| | ||||| Sbjct 2545 TTATTGGGTTTACCAAGTTCTGTAGCTGCCCTCGTGT-CTCTACGTCATGTCGTTTGCGA 2603 Query 2370 TAGAG-AGGCTTTATGGATGTGGGAAAAGGTCCAGAAGGCGGTTGCAGGA-CTTCGTGTT 2427 | ||| || ||| | ||||||||||||||| | ||| ||| | ||| ||| | || Sbjct 2604 T-GAGGAGACTTCGTCTATGTGGGAAAAGGTCAAAAAGATTGTTCC-GGAACTTTGCATT 2661 Query 2428 GAAG-CTGCGGAAAAAT-CTTTCAGCAGG-GATTGGCTCGACGATTAGG 2473 |||| | || |||||| ||| || | | |||||||| |||||||||| Sbjct 2662 GAAGTC-GCCAAAAAATGCTT-CACC-GTTGATTGGCTTGACGATTAGG 2707 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101510502925 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5