BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G07290.1 Length=3695 Score E Sequences producing significant alignments: (Bits) Value Ahg892659 jgi|Araly1|892659|Al_scaffold_0006_655 4255 0.0 Ahg950958 jgi|Araly1|950958|scaffold_802845.1 1975 0.0 > Ahg892659 jgi|Araly1|892659|Al_scaffold_0006_655 Length=2694 Score = 4255 bits (2304), Expect = 0.0 Identities = 2592/2727 (95%), Gaps = 36/2727 (1%) Strand=Plus/Plus Query 487 ATGCCATCTGATATATTGGAACCGAGAGGTGTGCCTACACCTTCTCATTTTCATGAAGAC 546 ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 1 ATGCCGTCTGATATATTGGAACCCAGAGGTCTGCCTACACCTTCTCATTTTCATGAAGAC 60 Query 547 ATTCGCATCACTCCTGAGAAACAATTTGGTTTCATGAAAAACAATCCAATGCCTGAAGGT 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATTCGCATCACTCCTGAGAAACAATTTGGTTTCATGAAAAACAATCCAATGCCTGAAGGT 120 Query 607 GGTGTGGATAGAAGTTCAAATCTACCGACTAGTTCTTGGACATCTGACAGTTACCAGCTC 666 |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGTGGGGATAGATGTTCAACTCTACCGACTAGTTCTTGGACATCTGACAGTTACCAGCTC 180 Query 667 TCTCAACAATCAAGCTTGTCTGGGGCGCTTCCCTCCTTTATCCCTAATGGAAGAACAACT 726 || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCGCAACAATCAAGCTTGTCTGGGGCGCTTCCCTCCTTTATCCCTAATGGAAG------- 233 Query 727 ACAAATGATACTCACTGGGAGAGCAGTCTATTCTCAAGCTCTCTGTCTGACCTATTTAGT 786 |||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct 234 --AAATGATACTCACTGGGAGAGCAGTCTATTTTCCAGCTCCCTGTCTGACCTATTTAGT 291 Query 787 AGAAAATTACGACTACCAAGAAGTGATAAGTTAGCCTTTATGTCTGCAAACCGCGAGGAA 846 ||||||||||| |||||| | |||||||||||||||||||||||||||||||| |||||| Sbjct 292 AGAAAATTACGGCTACCACGGAGTGATAAGTTAGCCTTTATGTCTGCAAACCGTGAGGAA 351 Query 847 GAACC-TTCAGAGTCCTTAGAAGAAATGGAGGCGCAAACTATTGGAAATCTTCTTCCTGA 905 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 352 GAACCTTTC-GAGTCCTTAGAAGAAATGGAGGCGCAAACTATTGGAAATCTTCTTCCAGA 410 Query 906 TGAGGATGATCTTTTTGCAGAAGTGGTTGGTGAGGGTGTCCATAAGTCTCGTGCCAATGG 965 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 411 TGAGGATGATCTTTTTGCAGAAGTGGTTGGTGAGGGTGTCCACAAGTCTCGTGCCAATGT 470 Query 966 TGGAGATGATTTGGATGATTGTGACCTATTCAGCAGTGTTGGTGGCATGGAACTAGATGG 1025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 TGGAGATGATTTGGATGATTGTGACCTATTCAGCAGTGTTGGTGGCATGGAACTAGATGG 530 Query 1026 AGATGTTTTCTCCTCTGTCAG-TCAAAGAGATGGCAAGAGAGGCAGCAATGTTTCGACTG 1084 |||||| ||||| |||||| | |||||||||| |||||||||||||||||||||||| || Sbjct 531 AGATGTATTCTCGTCTGTC-GTTCAAAGAGATAGCAAGAGAGGCAGCAATGTTTCGATTG 589 Query 1085 TTGCTGAGCATCCTCAAGGAGAAATTTTATCCAGAATACTTTTTGTTAGGAATGTGGATA 1144 ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 590 TTGGTGAGCATCCTCATGGAGAAACTTTATCCAGAATACTTTTTGTTAGGAATGTGGATA 649 Query 1145 GCAGCATTGAAGATTGCGAGCTGGGGGTCCTTTTTAAGCAATTTGGAGATGTTCGGGCTC 1204 ||| ||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||| Sbjct 650 GCATCATTGAAGATTGCGAGCTGAGGGTCCTTTTTAAGCAATATGGAGATATCCGGGCTC 709 Query 1205 TTCATACAGCTGGCAAGAATCGTGGCTTTATCATGGTATCATACTATGATATAAGAGCTG 1264 ||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| ||| Sbjct 710 TTCATACAGCTGGGAAGATTCGTGGCTTTATCATGGTATCATACCATGATATAAGATCTG 769 Query 1265 CTCAGAAAGCGGCAAGAGCACTCCACGGTAGGCTCTTAAGGGGAAGGAAGCTTGATATTC 1324 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 770 CTCAGAATGCGGCGAGAGCACTCCACGGTAGGCTCTTAAGGGGAAGGAAGCTTGATATTC 829 Query 1325 GCTATTCTATTCCAAAGGAAAATCCTAAAGAGAACTCCAGCGAAGGAGCCTTGTGGGTAA 1384 | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 830 GTTATTCTATCCCAAAGGAAAATCCTAAAGAGAACTCCAGCGAAGGAGCATTGTGGGTAA 889 Query 1385 ATAATCTTGATTCTTCTATATCCAATGAAGAGCTTCACGGTATATTCAGTTCATATGGAG 1444 |||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| Sbjct 890 ATAATCTTGATTCTTCTATATCCAATGAAGAGCTTCACAGAATATTCAGTTCATGTGGAG 949 Query 1445 AAATTAGAGAGGTTCGTAGAACGATGCATGAGAACTCACAAGTTTACATAGAGTTCTTTG 1504 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 950 AAATTAGAGAGGTTCGTAGAACAATGCATGAGAACTCACAAGTTTACATAGAGTTCTTTG 1009 Query 1505 ATGTTCGAAAGGCAAAGGTTGCACTTCAAGGACTAAATGGACTTGAGGTCGCTGGGAGGC 1564 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1010 ATGTTCGAAAGGCAGAGGTTGCACTTCAAGGACTAAATGGACTTGAGGTCGCTGGGAGGC 1069 Query 1565 AGCTTAAACTTGCACCAACCTGTCCAGAGGGTACAAGTTTCTGGCCACAGTTCGCTTCAG 1624 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| Sbjct 1070 AGCTTAAACTTGCACCAACCTGTCCAGAGGGTACAAGTTTCTCGCCACAGTTCACTGCAG 1129 Query 1625 ATGATGGTGAGGGGGGTCTACCTAAAATGGCTTTTAATAACCTATCATCAGCTCACATGG 1684 ||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||| Sbjct 1130 ATGATGGTGAGGGGGGTCTACCTAATATAGCTTTTAATAACCTATCATCAGCACATATGG 1189 Query 1685 GGAGACATTTCCCAGGAATATTAGCTTCAACCTCCATTGATGGTGGATCTATTCGAGGTA 1744 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 1190 GGAGACATTTCCCAGGAATATTAGCTTCGACCTCCATTGATGGTGGATCTATTCGAGCTG 1249 Query 1745 TGCACAATTCTGTTGGGTCACCTATGAACTCCTTCATTGAACGTCATCAGAGTCTCGATG 1804 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct 1250 TGCACAATTCTGTTGGGTCACCTGTGAACTCCTTCATTGAGCGTCATCAGAGTCTCAATG 1309 Query 1805 TTCCTATTGGTTTGCCACCATCGGCAAGAGTCATCTCAGCTAGCAAGCCTGTTGGTCTTC 1864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1310 TTCCTATTGGTTTGCCACCATCGGCAAGAGTCATCTCAGCTAGCAAGCCTGTTGGTCTTC 1369 Query 1865 AGGAGTTTGGAAACCCATTTGATAATTCGAAAACGGGGATCCAAAGTATGCCAAATCTCC 1924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1370 AGGAGTTTGGAAACCCATTTGATAATTCGAAAACGGGGATCCAAAGTATGCCAAATCTCC 1429 Query 1925 ATCCTCATTTTCCTGATTACCTTGACAACTTTGCAAGCGGTAGTCCATATAAATCCTCTA 1984 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1430 ATCCTCATTTTCCTGAGTACCTTGACAACTTTGCAAGCGGTAGTCCATATAAATCCTCTA 1489 Query 1985 CG-ACATTCTCTGAAATGGTAAGCGATGGCCAAAAAGCAAATGAGGGCTTTATGATGAGC 2043 | |||||||||||||||||||||||||||||||||||||||| || | Sbjct 1490 -GTACATTCTCTGAAATGGTAAGCGATGGCCAAAAAGCAAATG-----TT---------C 1534 Query 2044 AATGTTCGTGGAGTGGGAGTAGATGGATTTAATGGAGGTGTCATAGGATCTCCCATAAAT 2103 || | | |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1535 ---GT--G-G-AGTGGGCGTAGATGGGTTTAATGGAGGTGTCATAGGATCTCCCATAAAT 1587 Query 2104 CAAGGATCCCATCGTGGTAACCTCAACTTATGGAGTAACTCTAACAGTCAGCAACATAAT 2163 |||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||| Sbjct 1588 CAAGGATCCCATCGCGGTAATCTCAACTTATGGAGTAACGCTAACACTCAGCAACATAAT 1647 Query 2164 CAGTCAAGTGGCATGATGTGGCCTAACTCACCATCTCGCGTCAACGGCGTTCCCTCTCAG 2223 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1648 CAGTCAAGTGGCATGATGTGGCCTAACTCACCATCTCGCGTCAACGGCATTCCTTCTCAA 1707 Query 2224 CGCATCCCACCTGTTACTGCATTCTCTAGAGCATCTCCTTTAATGGTGAACATGGCATCA 2283 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1708 CGCATCCCGCCTGTTACTGCATTCTCTAGAGCATCTCCTCGGATGGTGAACATGGCATCA 1767 Query 2284 TCGCCTGTGCACCACCACATTGGATCTGCCCCGGTATTAAACTCACCTTTTTGGGATAGA 2343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1768 TCGCCTGTGCACCACCACATTGGATCTGCCCCGGTATTAAACTCACCTTTTTGGGATAGA 1827 Query 2344 AGACAGGCATATGTAGCTGAATCTCCAGAATCTTCAGGATTTCACTTAGGTTCTCCCGGT 2403 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1828 AGACAGGCATATGTAGCTGAATCTCCAGAATCTTCAGGATTTCACTTAGGTTCTCACGGT 1887 Query 2404 AGCATGGGATTTCCTGGCTCGTCTCCCTCACATCCAATGGATTTTGGTTCTCATAAGGTT 2463 |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct 1888 AGCATGGGATTTCCAGGCTCGTCTCCCTCACATCCAATGGAAATCGGTTCTCATAAGGTT 1947 Query 2464 TTTTCTCATGTCGGTGGGAATCGCATGGAGGCCAATTCAAAAAATGCTGTATTACGATCA 2523 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1948 TTTTCTCATGTTGGTGGGAATCGCATGGATACCAATTCAAAAAATGCTGTATTACGATCA 2007 Query 2524 TCGCGACAGATGCCTCACCTCTTTACTGGAAGGAGCCCAATGCTTTCAGTGTCAGGCTCA 2583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2008 TCGCGACAGATGCCTCACCTCTTTACTGGAAGGAGCCCAATGCTTTCAGTGTCAGGCTCA 2067 Query 2584 TTTGACTTGCCTAATGAACGATACAGGAATCTCTCTCACCGAAGAAGTGAATCTAACTCT 2643 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2068 TTTGACTTACCTAATGAACGATACAGGAATCTCTCTCACCGAAGAAGTGAATCTAGCTCT 2127 Query 2644 AGTAATGCTGAAAAGAAACTGTATGAGCTTGATGTAGATCGCATATTACGTGGGGAAGAC 2703 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 2128 AGTAATGCTGAAAAGAAACTGTATGAGCTTGATGTTGATCGCATATTACGTGGGGACGAC 2187 Query 2704 AGTAGAACAACGTTGATGATAAAGAACATTCCTAATAAGTATACTTCTAAGATGCTCCTA 2763 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 2188 AGTAGAACAACATTGATGATAAAGAACATTCCTAACAAGTATACTTCTAAGATGCTTCTA 2247 Query 2764 GCTGCTATTGATGAGTACTGTAAAGGAACATATGATTTTCTTTATTTGCCAATTGACTTC 2823 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2248 GCTGCTATTGATGAGTACTGTAAAGGAACATATGATTTCCTTTATTTGCCAATTGACTTC 2307 Query 2824 AAGAATAAATGCAATGTCGGATATGCTTTCATCAACCTTATCGAACCTGAAAATATTGTT 2883 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 2308 AAGAATAAATGCAATGTGGGATATGCTTTCATCAACCTTACCGAACCTGAAAATATTGTT 2367 Query 2884 CCGTTTTATAAGGCATTCAACGGTAAGAAATGGGAAAAGTTCAACAGCGAGAAGGTGGCA 2943 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2368 CCCTTTTATAAGGCATTCAACGGTAAGAAATGGGAAAAGTTCAACAGCGAGAAGGTGGCA 2427 Query 2944 TCGCTTGCATATGGTCGGATTCAGGGGAAATCAGCTCTTATTGCCCATTTCCAGAACTCA 3003 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2428 TCTCTTGCATATGGTCGGATTCAGGGAAAATCAGCTCTTATTGCCCATTTCCAGAACTCA 2487 Query 3004 AGTTTGATGAACGAAGACAAACGTTGCAGGCCTATTCTCTTCCACACTGCTGGTCCAAAT 3063 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2488 AGTTTGATGAACGAAGACAAACGTTGCAGGCCTATTCTCTTCCACACTGCTGGTCCAAAT 2547 Query 3064 GCTGGTGATCAGGAACCATTTCCAATGGGTTCAAACATCCGGTCAAGACCAGGCAAGCAT 3123 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 2548 GCTGGTGATCAGGAACCATTTCCAATGGGTTCCCACATCCGGTCAAGACCAGGCAAGCCT 2607 Query 3124 CGAACAAATAGCATCGAGAACTACACCAACTTTAGCAGTAGCTCTGATAACCGAGACGAA 3183 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 2608 CGAACAAGTAGCATCGAGAACTACACCAACTTTAGCAGTAGCTCTGAAAACCGAGAAGAA 2667 Query 3184 CCTGCAAATGGGAACGACTCCATGTAA 3210 |||| ||||||||||||||| |||||| Sbjct 2668 CCTGGAAATGGGAACGACTCGATGTAA 2694 > Ahg950958 jgi|Araly1|950958|scaffold_802845.1 Length=2752 Score = 1975 bits (1069), Expect = 0.0 Identities = 2216/2748 (81%), Gaps = 166/2748 (6%) Strand=Plus/Plus Query 487 ATGCCATCTGATA-TATTGGAACCGAGAGGTGTGCCTACACCTTCTCATTTTCATGAAGA 545 ||||| ||||||| || |||||| ||||||||| | |||||||| || |||||||| || Sbjct 21 ATGCCGTCTGATATTA-TGGAACAGAGAGGTGTTTCAACACCTTCCCACTTTCATGATGA 79 Query 546 CATTCGCATCACTCCTGAGAAACAATTT-GGTTTCATGAAAAACA-ATCC-AATGCCTG- 601 |||| || ||| | |||| |||||| ||||| ||| |||||| | || ||||||| Sbjct 80 TATTCATATTACTTCAGAGAGGCAATTTGGGTTT-ATG-AAAACAGA-CCTGATGCCTGA 136 Query 602 -----AAGGTGGT-GTGGATAGAAGTTCAAATCTACCGACTAGTTCTTGGACATCTGACA 655 |||||||| || |||||| ||||| | | || | ||||| ||||||||||| | Sbjct 137 AAACCAAGGTGGTCGT-GATAGACTTTCAAGTATGCCAAAGAGTTCCTGGACATCTGAAA 195 Query 656 GTTACCAGCTCTCTCAACAATCAAGCTTGTCTGGGGCGCTTC-CCTCCT-TTATCCCTAA 713 |||||||||| | |||||| || || |||||| | | | ||| || ||| |||||| Sbjct 196 GTTACCAGCTGAAGCCACAATCTAGTTTTTCTGGGTCAC-ACTCCT-CTGTTAGCCCTAA 253 Query 714 -TGGAAG-AACAACTACAAATGATACTCACTGGGAGAGCAGTCTATTCTCAAGCTCTCTG 771 | ||| ||| |||||||||| || ||| ||||| |||||| |||| || ||||| || Sbjct 254 CT-CAAGAAAC-ACTACAAATGGTAGTCAGTGGGAAAGCAGTTTATTTTCCAGCTCAATG 311 Query 772 TCTGACCTATTTAGTAGAAAATTACGACTACCAA-GAAGTGATAAGTTAGCCTTTATGTC 830 ||||| | |||||||||||| | || ||| ||| ||||||||| | || || |||||| Sbjct 312 TCTGATTTGTTTAGTAGAAAACTGCGGCTA-CAAGGAAGTGATATGCTATCCACTATGTC 370 Query 831 TGCAAAC-C----G--------C--GAGGAAGAACCTTCAGAGTCCTTAGAAGAAATGGA 875 ||||||| | | | || |||||||| || || || |||||||| || || Sbjct 371 TGCAAACACAGTTGTTACCCACCGTGAAGAAGAACCGTCTGAATCTTTAGAAGAGATTGA 430 Query 876 GGCGCAAACTATTGGAAATCTTCTTCCTGATGAGGATGATCTTTTTGCAGAAGTGGTTGG 935 ||| |||||||||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 431 GGCACAAACTATTGGAAATCTTCTCCCAGATGAAGATGATCTTTTTGCGGAAGTGACAGG 490 Query 936 TGAGGGTGTCCATAAGTCTCGTGCCAATGGTGGAGATGATTTGGATGA-TTGTGACCTAT 994 ||||| || | ||| |||||||| ||| |||||||||||||||||| || |||||| | Sbjct 491 TGAGGTTGGGCGTAAATCTCGTGCTAATACTGGAGATGATTTGGATGAGTT-TGACCTCT 549 Query 995 TCAGCAGTGTTGGTGGCATGGAACTAGATGGAGATGTTTTCTCCTCTGTCAGTCAAAGAG 1054 |||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||| Sbjct 550 TCAGCAGTGTTGGTGGCATGGAACTAGATGGAGATGTTTTTTCTTCTGTGAGTCATAGAA 609 Query 1055 ATGGCAAGAGAGGCAGCAATGTTTCGACTGTT-GCTGAGCATCCTCAAGGAGAAATTTTA 1113 |||| ||||||| ||||| || ||||| || || | || || || |||||| | Sbjct 610 ATGGTGAGAGAGGTGGCAATAATT---CTGTTGGC-GAACTTCATCGTGGGGAAATTCCA 665 Query 1114 TCCAGAATACTTTTTGTTAGG-AATGTGGA-TAGCAGCATTGAAGATTGCGAGCTGGGGG 1171 ||||||| || ||||| | || ||| | | ||||| || ||||| | ||| || ||| Sbjct 666 TCCAGAACAC-TTTTGGTCGGAAATAT-CAGTAGCAATATCGAAGACTATGAGTTGAGGG 723 Query 1172 TCCTTTTTAAGCAATTTGGAGATGTTCGGGCTCTTCATACAGCTGGCAAGAATCGTGGCT 1231 | ||||| ||||||||||||| | | |||||||||||||||| |||| |||||||||| Sbjct 724 TTATTTTTGAGCAATTTGGAGAAATCCAGGCTCTTCATACAGCTTGCAAAAATCGTGGCT 783 Query 1232 TTATCATGGTATCATACTATGATATAAGAGCTGCTCAGAAAGCGGCAAGAGCACTCCACG 1291 ||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct 784 TTATCATGGTATCGTACTATGATATAAGGGCTGCTCAGAATGCGGCGAGAGCACTCCA-G 842 Query 1292 -GTAGGCTCTTAAGGGGAAGGAAGCTTGATATTCGCTATTCTATTC-CAAAGGAAAATCC 1349 || ||| ||||| |||| || ||||| ||||| ||||||| || | ||||||||||| Sbjct 843 AATAAGCTGTTAAGAGGAACAAAACTTGACATTCGTTATTCTA-TCTCTAAGGAAAATCC 901 Query 1350 --TA-AAGAGAACTCCA-GCGAAGGAGCCTTGTGGGTAAATAATCTTGATTCTTCTATAT 1405 || || || | | || | |||||||||||| ||| |||||||| ||||||||||| | Sbjct 902 TTTAGAAAAGGA-TACATGTAAAGGAGCCTTGTTGGTTAATAATCTCGATTCTTCTATTT 960 Query 1406 CCAATGAAGAGCTTC-A-CGGTATATTCAGTTCATATGGAGAAATTAGAGAGGTTCGTAG 1463 | ||| |||||| || | | | | ||| ||||||||||| || | |||| | ||||| Sbjct 961 CGAATCAAGAGC-TCAATC-GCCTGGTCAAATCATATGGAGAGATCAAAGAGATCCGTAG 1018 Query 1464 AACGATGCATGAGAACTCACAAG-TTTACATAGAGTTCTTTGATGTTCGA-AAGGCA-AA 1520 ||| |||||||| ||| ||| || | ||||||||||||||||| |||||| | ||| | Sbjct 1019 AACCATGCATGATAACCCAC-AGATATACATAGAGTTCTTTGACGTTCGAGCA-GCAGCA 1076 Query 1521 GGTTGCACTTCAAGGACTAAATGGACTTGAGGTCGCTGGGAGGCAGCTTAAACTTGCACC 1580 | ||| ||| |||||||||||||||||||| || |||| | |||| |||| | | Sbjct 1077 -GCTGCTCTTGGTGGACTAAATGGACTTGAGGTTGCCGGGAAGAAGCTCCAACTGGTGGC 1135 Query 1581 AACCTGTCCAGAGGGTACAAGTTTCTGGCCACA-GTTCGCTTCAGATGATGGTGAGGGGG 1639 |||||||||||||||||||| | | | |||| | | ||| || ||||| ||| ||| Sbjct 1136 GACCTGTCCAGAGGGTACAAGATACACGTCACAGGGT-GCTGCACATGATACTGAAGGGT 1194 Query 1640 GTCTACCTAAAATGGCTTTTAATAA-CCTATCATCAGCTCACATGGGGAGACATTTCCCA 1698 |||||||||||| | ||| || ||| | |||||| | ||||| || |||||||||||| Sbjct 1195 GTCTACCTAAAACGTCTTATAGTAATAC-ATCATCGGGACACATAGGTAGACATTTCCCA 1253 Query 1699 GGAAT-ATTAG-CTTCAACCTCCATTGATGGTGGATCTATTCGAGG-TATGCACAATTCT 1755 ||||| | | | |||||||||||| ||||||||||||||| || || ||| || |||||| Sbjct 1254 GGAATGA-T-GTCTTCAACCTCCAATGATGGTGGATCTATGCG-GGTTATACATAATTCT 1310 Query 1756 GTTGGGTCACCTATGAACTCCTTCATTGAACGTCATCAGAGTCTCGATG--TTCCTATTG 1813 || || |||||| |||| |||||||||||||| |||| ||||||| | | ||||||||| Sbjct 1311 GTCGGATCACCTGTGAATTCCTTCATTGAACGGCATCGGAGTCTC-A-GCATTCCTATTG 1368 Query 1814 GTTTGCCACCATCGGCAAGA-GTCATCTCAGCTAGCAAGCCTGTTGGTCTTCAGGAGTTT 1872 | || ||||| || |||| | | ||||||||| ||||| ||||| || ||||||||| | Sbjct 1369 GATTCCCACCCTCAGCAA-ACGCCATCTCAGCCAGCAAACCTGTAGGACTTCAGGAGCAT 1427 Query 1873 GGAAACCCA-TTTGATAATTCGAAA-ACGGGGATCCAAAGTATGCCAAATCTCCATCCTC 1930 || | ||| ||||||||||| ||| | |||||||||||| ||||||||||||||||||| Sbjct 1428 GGCCA-CCATTTTGATAATTC-AAATATGGGGATCCAAAGCATGCCAAATCTCCATCCTC 1485 Query 1931 A---TTTTCCTGATTACCTTGACAACTTTGCAAGCGGTAGTCCATATAAATCCTCTACGA 1987 | |||| | |||||| | ||||||||||||| |||||||||||||| |||||| | Sbjct 1486 ATTCTTTTTCAGATTACGTGGACAACTTTGCAAATGGTAGTCCATATAAGTCCTCT--G- 1542 Query 1988 CATTCTCTGAAATGGT-AAGCGATGGC-CAAAAAGCAAATGAGGGCTTTATGATGAGC-- 2043 |||| ||||||||||| || |||||| | |||||||||||| |||||||||| | | Sbjct 1543 CATTTTCTGAAATGGTCAA-TGATGGCTC-AAAAGCAAATGAAAGCTTTATGAT-A-CAT 1598 Query 2044 AATGTTCGTGGAGTGGGAGTAGATGGATTTAATGGA-GGTGTCATAGGATCTCCCATAAA 2102 |||||||||||||| | ||||| |||| |||| || || |||||||||||||| | Sbjct 1599 AATGTTCGTGGAGT----G--GATGGCTTTAGTGGAGGGGGT-ATAGGATCTCCCATGCA 1651 Query 2103 TCAAGGATCCCATCGTGGTAACCTCAACTTATGGAGTAACTCTAACAGTCAGCAACATAA 2162 |||| | |||| || |||||| || |||||||| |||||||||| ||||||||| || Sbjct 1652 TCAAAGCTCCCGCCGCCCTAACCTTAATTTATGGAGCAACTCTAACACTCAGCAACAGAA 1711 Query 2163 TCAGTCAAGTGGCATGATGTGGCCTAACTCACCATCTCGCGTCAACGGCGTTCCCT-CTC 2221 || ||||||||||||||||||||||||||| ||||||| | ||||| || || ||| ||| Sbjct 1712 TCCGTCAAGTGGCATGATGTGGCCTAACTCGCCATCTCACATCAACAGCATT-CCTACTC 1770 Query 2222 AGCGCATCCCACCTGTTACTGCATTCTCTAGAGCATCTCCTTTAATGGTGAACATGGCAT 2281 |||| |||||||||||||| ||||||||||||| ||||| |||||||||| ||||||| Sbjct 1771 AGCG---CCCACCTGTTACTGTATTCTCTAGAGCACCTCCTATAATGGTGAATATGGCAT 1827 Query 2282 CATCGCCTGTGCACCACCACATTGGATCTGCCCCGGTATTAAACTCACCTTTTTGGGATA 2341 | || |||||||| || || ||||||||||| |||||||||||||| ||||| ||||| | Sbjct 1828 CTTCCCCTGTGCATCATCATATTGGATCTGCGCCGGTATTAAACTCGCCTTTCTGGGACA 1887 Query 2342 GAAGACAGGCATATGTAGCTGAATCTCCAGAATCTTCAGGATTTCACTTAGGTTCTCCCG 2401 ||||||| || |||||||||||||||| |||| || | | | | || || || Sbjct 1888 GAAGACAAGCCTATGTAGCTGAATCTCTAGAA---TC---A--T--C-T-GG--CTTCC- 1932 Query 2402 GTAGCATGGGATTTCCTGGCTCGTCTCCCTCACATCCAATGGATTTTGGTTCTCATAAGG 2461 | ||| || | | || || ||||||||||||||||| ||||||||||||| | Sbjct 1933 --A-CATAGG---T--T--CT--TCACCCTCACATCCAATGGACATTGGTTCTCATAA-G 1979 Query 2462 TTTTTTCTCATGTCGGTGGGAATCGCATGGAGGCCAA-TTCAAAAAATGCTGTATTACGA 2520 |||||| ||| ||||||||||| ||||| | || ||| ||||||||||| | ||| Sbjct 1980 -ACTTTCTC-TGTTGGTGGGAATCGTATGGATG-TAACTTCCCAAAATGCTGTACTGCGA 2036 Query 2521 TCAT-CGCGACAGATGCCTCACCTCTTTACTGGAAGGAGCCCAATGCTTTCAG-TGTCAG 2578 || | | | |||| || |||| |||||| |||||||||| |||||| ||| | || ||| Sbjct 2037 TC-TCCTCAACAGTTGTCTCATCTCTTTCCTGGAAGGAGTCCAATGGGTTC-GATGCCAG 2094 Query 2579 GCTCATTTGACTTGCCTAATGAACGATACAGGAATCTCTCTCACCGAAGAAGTGAATCTA 2638 | || ||||||| ||| |||||| |||||||||||||||||||||| ||||| ||||||| Sbjct 2095 GGTCGTTTGACTCGCCAAATGAAAGATACAGGAATCTCTCTCACCGTAGAAGCGAATCTA 2154 Query 2639 ACTCTAGTAATGCTGAAAAGAAACTGTATGAGCTTGATGTAGATCGCATATTACGTGGGG 2698 |||||| |||||||| |||||||||||||||||||| || || || ||||||||||||| Sbjct 2155 GCTCTAGCAATGCTGACAAGAAACTGTATGAGCTTGACGTTGACCGTATATTACGTGGGG 2214 Query 2699 AAGACAGTAGAACAACGTTGATGA-TAAAGAACATTCCTAATAAGTATACTTCTAAGATG 2757 | ||||| || ||||| ||||||| |||| ||||||||||| ||||| |||||||||||| Sbjct 2215 ATGACAGGAGGACAACTTTGATGATTAAA-AACATTCCTAACAAGTACACTTCTAAGATG 2273 Query 2758 CTCCTAGCTGCTATTGATGAGTACTGTAAAGGAACATATGATTTTCTTTATTTGCCAATT 2817 || ||| |||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct 2274 CTTCTATCTGCTATTGACGAGCACTGTAAAGGAACTTATGATTTCCTTTATTTGCCAATT 2333 Query 2818 GACTTCAAGAATAAATGCAATGTCGGATATGCTTTCATCAACCTTATCGAACCTGAAAAT 2877 ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct 2334 GACTTCAAGAACAAATGCAATGTGGGATATGCTTTCATCAATCTTATTGAACCTGAAAAG 2393 Query 2878 ATTGTTCCGTTTTATAAGGCATTCAACGGTAAGAAA-TGGGAAAAGTTCAACAGCGAGAA 2936 ||||| || |||| ||||||||| || || || ||| |||||||||||||| |||||||| Sbjct 2394 ATTGTCCCATTTTTTAAGGCATTTAATGGCAA-AAAGTGGGAAAAGTTCAATAGCGAGAA 2452 Query 2937 GGTGGCATCGCTTGCATATGGTCGGATTCAGGGGAAATCAGCTCTTATTGCCCATTTCCA 2996 ||||||| ||||| | |||| ||| || || |||||| |||||||||||||||||||||| Sbjct 2453 GGTGGCAACGCTTACGTATGCTCGTATCCAAGGGAAAACAGCTCTTATTGCCCATTTCCA 2512 Query 2997 GAACTCAAGTTTGATGAACGAAGACAAACGTTGCAGGCCTATTCTCTTCCACACTG-CTG 3055 ||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||| | | Sbjct 2513 GAATTCAAGCTTAATGAACGAAGACAAACGTTGCAGACCTATTCTCTTCCACACTGAC-G 2571 Query 3056 GTCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGTT-CAAACATCCGGTCAAGACCA 3114 ||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||| Sbjct 2572 GTCCAAATGCTGGTGATCAGGAACCATTTCCAATGGGAAGCAA-CATACGATCAAGACCA 2630 Query 3115 GGCAAGC-ATCGAA-CAAATAGCATCGAGAACTACACCAACTTTAGCA 3160 || |||| | |||| || |||||| || ||||||| || |||||||| Sbjct 2631 GGAAAGCCA-CGAAGCAG-TAGCATTGATAACTACAACAGCTTTAGCA 2676 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 139595177764 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5