BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G09930.1 Length=2037 Score E Sequences producing significant alignments: (Bits) Value Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1 3336 0.0 Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1 1751 0.0 > Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1 Length=2037 Score = 3336 bits (1806), Expect = 0.0 Identities = 1963/2040 (96%), Gaps = 6/2040 (0%) Strand=Plus/Plus Query 1 ATGGTATTAACGACGAATCTCTATAGCTTAAACCTTCGTTC-GACCTTCTTCTTCACTAA 59 |||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct 1 ATGGGATTAACGACGAATCTCCATAGCTTAAACCTTCGTTCTG-CCTTCTTCTTCACTAA 59 Query 60 TACTATTACTTGCCCTACACTTTTCACCTTCAAACTCTCCTCTGTTTCTAACCCTAGACG 119 | || || |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 60 TCCTCTTCCTTGCCATACACTATTCACCTTCAAACTCTCCTCTGTTTCTAACCCTAGACG 119 Query 120 AGTATTCCCCAATATTAGAGCTCACGTTTCCGCAGCCAGCTCCAATTCAGAGCTCGAATC 179 || |||||||||||||| ||| || ||||||||| |||||||||||||||||||||| || Sbjct 120 AGAATTCCCCAATATTATAGCCCAAGTTTCCGCAACCAGCTCCAATTCAGAGCTCGAGTC 179 Query 180 TCTCTTATCTACCGATCGGAAGCTGATCAGTAAGCAATCAAACAATGGTGCGTCTTCGAT 239 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 180 TCTCTTGTCTACCGATCGGAAGCTGATCGGTAAGCAATCAAACAATGGTGCGTCTTCGAT 239 Query 240 TTCGTCGGGAGTGAGACTTGAGAACATTAGTAAGAGCTATGAAGGCATTAC-GGTGCTAA 298 |||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||| Sbjct 240 TTCGTCTGGAGTGAGACTTGAGAACATTAGTAAGAGCTATGAAGGCGTTACAGG-GCTAA 298 Query 299 AGGATGTGACTTGGGAAGTGAAGAAAGGAGAAAAAGTAGGGTTAATCGGCGTCAACGGTG 358 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 299 AGGATGTGACTTGGGAAGTGAAGAAAGGAGAAAAAGTAGGTTTAATCGGCGTTAACGGTG 358 Query 359 CAGGGAAGACGACACAGCTCAGGATCATAACGGGTCAAGAAGAACCTGATTCAGGAAACG 418 | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 359 CGGGGAAGACGACACAGCTCAAGATCATAACGGGTCAAGAAGAACCTGATTCAGGAAACG 418 Query 419 TGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCTTGAGTCAAGAGTTCGAGGTTTCAA 478 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 419 TGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCTTGAGTCAAGAATTCGAGGTTTCGA 478 Query 479 TGGGGAAGACAGTGAAGGAAGAGTTCATGTGTACGTTTAAGGAAGAGATGGAAATAGCGA 538 ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| | Sbjct 479 TGGGGAAGACAGTGAAGGAAGAGTTCATGAGTGCGTTTAAGGAAGAGATGGAAGTAGCAA 538 Query 539 GGAAGCTTGAGAACTTGCAGAAGGCGATTGAAGAAGCTGTTGATGATTTAGAACTAATGG 598 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 GGAAGCTTGAGAGGTTGCAGAAGGCGATTGAAGAAGCTGTTGATGATTTAGAACTAATGG 598 Query 599 GAAAGTTACTAGACGAATTCGATTTGTTGCAGAGACGAGCTCAAGAGGTTGATTTGGATT 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 GAAAGTTACTAGACGAATTCGATTTGTTGCAGAGACGAGCTCAAGAGGTTGATTTGGATT 658 Query 659 CTATCCATGCTAAAATCAGTAAGCTGATGTCGGAATTAGGGTTTGTGTCGGAGGATGCTG 718 || || ||||||||||||||||||| ||||||||||||||| |||||||||||||||| | Sbjct 659 CTGTCGATGCTAAAATCAGTAAGCTTATGTCGGAATTAGGGCTTGTGTCGGAGGATGCAG 718 Query 719 ATAGGCTTGTGGCTTCTTTTAGCAGTGGATGGCAAATGAGAATGTCACTTGGGAAGATTT 778 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 719 ATAGGCTTGTGGCTTCTTTTAGTAGTGGATGGCAAATGAGAATGTCACTTGGGAAGATTT 778 Query 779 TGCTTCAGAATCCAGATTTACTGCTTTTGGATGAGCCAACGAATCATTTGGATCTTGATA 838 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 779 TGCTTCAGAATCCAGATTTACTGCTATTGGATGAGCCAACGAATCATTTGGATCTTGATA 838 Query 839 CTATTGAGTGGCTTGAAGGTTACTTGATTAAGCAAGATGTGCCTATGGTCATAATATCAC 898 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 839 CTATTGAGTGGCTTGAAGGTTACTTGAATAAGCAAGATGTGCCTATGGTTATAATATCAC 898 Query 899 ATGACAGGGCGTTTCTTGATCAGTTGTGTACTAAAATTGTGGAAACCGAAATGGGAGTTT 958 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 ATGACAGAGCGTTTCTTGATCAGTTGTGTACTAAAATTGTGGAAACCGAAATGGGAGTTT 958 Query 959 CGAGGACTTTCGATGGTAATTACTCTCAGTATGTAATTTCAAAGGCAGAGTTGGTTGAAG 1018 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 959 CGAGGACTTTCGAGGGTAATTACTCTCAGTATGTAATTTCAAAGGCAGAGTGGGTCGAAG 1018 Query 1019 CTCAGTATGCTGCTTGGGAGAAGCAACAGAAAGAGATTGAAGCAACAAAGGATTTGATTA 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 CTCAGTATGCTGCTTGGGAGAAGCAACAGAAAGAGATTGAAGCAACAAAGGATTTGATTA 1078 Query 1079 GTAGGCTAAGTGCTGGAGCAAATTCTGGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGA 1138 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 CTAGGCTAAGTGCTGGAGCAAATTCTGGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGA 1138 Query 1139 AGCTTCAGGAAGAGGAGCTAATAGAGAAGCCATTTCAGCGGAAACAAATGAAAATCCGGT 1198 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 1139 AGCTTCAAGAAGAGGAGCAAATAGAGAAGCCATTTCAGCGGAAACAAATGAAAATCAGGT 1198 Query 1199 TTCCGGAATGTGGATTAAGTGGAAGATCTGTAGTCACTGTTAAGAATCTTGTATTTGGTT 1258 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 1199 TTCCGGAATGTGGATTAAGCGGAAGATCTGTAGTCACTGTTAAGAATCTTGGATTTGGTT 1258 Query 1259 TTGATGATAAGATGTTATTTAACAAGGCGAATCTAGCTATAGAAAGAGGAGAGAAAGTCG 1318 |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1259 TTGAGGATAAGATGTTATTTAACAAGGCAAATCTAGCGATAGAAAGAGGAGAGAAAGTCG 1318 Query 1319 CTATAATTGGTCCAAACGGGTGCGG-AAAGAGTACATTGCTGAAACTTATTATGGGTTTG 1377 ||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||| Sbjct 1319 CTATAATTGGTCCAAACGGGTGCGGTAAA-AGTACATTGTTGAAACTGATTATGGGTTTG 1377 Query 1378 GAGAAGCCTATGAGAGGTGAGGTGATACTTGGGGAGCACAATGTATTGCCAAACTACTTC 1437 |||||||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||| Sbjct 1378 GAGAAGCCTATGAGAGGTGAAGTGATTCTCGGGGAGCACAATGTCTTGCCTAACTACTTC 1437 Query 1438 GAGCAGAATCAGGCAGAGGCTCAAGATTTGGATAAAACGGTGATTGAGACAGTTGTTGAA 1497 || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1438 GAACAGAATCAGGCAGAGGCTCTAGATTTGGATAAAACTGTGATTGAGACAGTTGTTGAA 1497 Query 1498 GCTGCTGTAGATTGGAGAATTGATGATATAAAAGCTCTTCTTGGTCGGTGCAACTTCAAA 1557 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1498 GCTGCTGTAGATTGGAGAATTGATGATATAAAAGCTCTTCTTGGTCGCTGCAACTTCAAA 1557 Query 1558 GCTGACATGTTGGATAGAAAGGTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCT 1617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 GCTGACATGTTGGATAGAAAGGTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCT 1617 Query 1618 TTCTGCAAATTCATGGTGAAACCATCCACTCTACTTGTGTTGGACGAACCCACCAATCAC 1677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 TTCTGCAAATTCATGGTGAAACCATCCACTCTACTTGTGTTGGACGAACCCACCAATCAC 1677 Query 1678 TTAGACATACCTTCAAAAGAAATGCTTGAGGAAGCTATAAATGAGTACAAAGGCACGGTC 1737 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1678 TTAGACATACCTTCAAAAGAAATGCTTGAGGAAGCGATAAATGAGTACAAAGGCACGGTC 1737 Query 1738 ATCACAGTCTCACACGATAGATACTTCATTAAACAGATTGTTAACAGAGTTATTGAAGTC 1797 ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 1738 ATCGCAGTCTCACACGATAGATACTTCATTAAACAAATTGTTAACAGAGTAATTGAAGTC 1797 Query 1798 AGAGATGGTGGTTTAATGGACTATGCAGGAGACTACAATTATTTCCTGGAGAAGAATGTT 1857 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1798 AGAGATGGTGGTTTAATGGACTATGCAGGAGACTACAATTATTACCTAGAGAAGAATGTT 1857 Query 1858 GAAGCTAGAGCAAGGGAGCTGGAGAGGGAAGCAGAATTGGAAGAAAAAGCTCCAAAAGTG 1917 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1858 GAAGCTAGAGCAAGGGAGCTGGAGAGGGAAGCAGAATTGGAGGAAAAAGCTCCAAAAGTG 1917 Query 1918 AAAGCAAAGTCAAAGATGTCAAAGGCTGAGAGAGAAGCACGGAAGAAGCAAAAGATGAAA 1977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1918 AAAGCAAAGTCAAAGATGTCAAAGGCTGAGAGAGAAGCACGGAAGAAGCAAAAGATGAAA 1977 Query 1978 GCGTTTCAAGCTTCCAAAAAGAAGTCAAAGTCCAGCAAAAATGCCAAGAGATGGAATTAA 2037 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1978 GCGTTTCAAGCTTCCAAAAACAAGTCTAAGTCCAGCAAAAATGCCAAGAGATGGAATTAA 2037 > Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1 Length=2367 Score = 1751 bits (948), Expect = 0.0 Identities = 1552/1841 (84%), Gaps = 51/1841 (3%) Strand=Plus/Plus Query 218 CAAACAATGGTGCGTCTTCGATTTCGTCGGGAGTG-AGACTTGAGAACATTAGTAAGAGC 276 |||| || || || ||| ||||||||| || ||| || || |||||||| || |||||| Sbjct 358 CAAA-AACGGAGCTTCTGGGATTTCGTCAGGTGTGAAG-CTAGAGAACATAAGGAAGAGC 415 Query 277 TATGAAGGCATTACGGTGC-TAAAGGATGTGACTTGGGAAGTGAAGAA-AGGAGAAAAAG 334 || ||||| | || |||| |||| |||||||| ||||||||||| || || || |||| Sbjct 416 TACAAAGGCGTGACTGTGCTTAAA-GATGTGACCTGGGAAGTGAA-AAGGGGTGAGAAAG 473 Query 335 TAGGGTTAATCGGCGTCAACGGTGCAGGGAAGACGACACAGCTCAGGATCATAACGGGTC 394 |||||||| | || || ||||| || ||||||||||| ||||||||||| || || |||| Sbjct 474 TAGGGTTAGTGGGAGTGAACGGAGCTGGGAAGACGACTCAGCTCAGGATTATCACTGGTC 533 Query 395 AAGAAGAACCTGATTCAGGAAACGTGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCT 454 ||||||| ||||||||||| ||||| || ||||||||||||| ||||| | ||||||| Sbjct 534 AAGAAGAGCCTGATTCAGGTAACGTAATCAAGGCCAAACCCAATATGAAAATAGCTTTCT 593 Query 455 TGAGTCAAGAGTTCGAGGTTTCAATGGGGAAGACAGTGAAGGAAGAGTTCATGTGTACGT 514 |||| || || || |||||||| ||| | ||||| |||| ||||||||||||| || | | Sbjct 594 TGAGCCAGGAATTTGAGGTTTCGATGAGTAAGACGGTGAGGGAAGAGTTCATGAGTGCTT 653 Query 515 TTAAGGAAGAGATGGAAAT-AGC-GAGGAAGCTTGAG-AACTTGCAGAAGGCGATTGAAG 571 |||||||||||||||| || | | || |||||||||| || || |||||||| ||||||| Sbjct 654 TTAAGGAAGAGATGGAGATCA-CTGA-GAAGCTTGAGAAAGTT-CAGAAGGCTATTGAAG 710 Query 572 AAGCTGTTGATGATTTAGAACTAATGGGAAAGTTACTAGACGAATTCGATTTGTTGCAGA 631 | ||||||||||||| || || ||||||| |||| |||| ||||| ||||||||||||| Sbjct 711 GATCTGTTGATGATTTGGATCTTATGGGAAGGTTATTAGATGAATTTGATTTGTTGCAGA 770 Query 632 GACGAGCTCAAGAGGT-TG-ATTTGGATTCTATCCATGCTAAAATCAGTAAGCTGATGTC 689 ||||||||| || | | || |||||||||| | ||||||| || |||||| ||||| | Sbjct 771 GACGAGCTC-AG-GCTGTGAATTTGGATTCCGTTGATGCTAAGATTAGTAAGTTGATGCC 828 Query 690 GGAATTAGGGTTTGTGTCGGAGGATGCTGATAGGCTTGTGGCTTCTTTTAGCAGTGGATG 749 ||||||||| |||| || |||||||||||||||||||||||||| ||||| ||||||| Sbjct 829 GGAATTAGGTTTTGCCTCAGAGGATGCTGATAGGCTTGTGGCTTCCTTTAGTGGTGGATG 888 Query 750 GCAAATGAGAATGTCACTTGGGAAGATTTTGCTTCAGAATCCAGATTTACTGCTT-TTGG 808 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| || | Sbjct 889 GCAAATGAGAATGTCACTTGGAAAGATTTTGCTTCAGGATCCAGATTTGCTGCTTCTT-G 947 Query 809 ATGAGCCAACGAATCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTACTTG-ATT 867 ||||||| || || |||||||||||||||||||||||||||||||||||||| ||| | Sbjct 948 ATGAGCCGACCAACCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTATTTGCAG- 1006 Query 868 AAGCAAGATGTGCCTATGGTCATAATATCACATGACAGGGCGTTTCTTGATCAGTTGTGT 927 |||||||||||||||||||| || || ||||||||||| || |||||||||||||| ||| Sbjct 1007 AAGCAAGATGTGCCTATGGTTATTATTTCACATGACAGAGCCTTTCTTGATCAGTTATGT 1066 Query 928 ACTAAAATTGTGGAAACCGAAATGGGAGTTTCGAGGAC-TTTCGATGGTAATTACTCTCA 986 ||||||||||||||||| || ||||| || || ||||| ||| || |||||||| ||||| Sbjct 1067 ACTAAAATTGTGGAAACTGAGATGGGTGTGTCCAGGACATTT-GAGGGTAATTATTCTCA 1125 Query 987 GTATGTAATTTCAAAGGCAGAGTTGGTT-GAAGCTCAGTATGCTGCTTGGGAGAAGCAAC 1045 |||||| || ||||||||||||| || | ||| ||||| |||| |||||||| ||||||| Sbjct 1126 GTATGTGATCTCAAAGGCAGAGT-GGATCGAAACTCAGAATGCAGCTTGGGAAAAGCAAC 1184 Query 1046 AGAAAGAGATTGAAGCAACAAAGGATTTGATTAG-TAGGCTAAGTGCTGGAGCAAATTCT 1104 |||||||||| || |||| ||||| ||||| | |||||| ||||||| || |||||| Sbjct 1185 AGAAAGAGATCGATTCAACTAAGGACTTGATC-GCTAGGCTTGGTGCTGGTGCCAATTCT 1243 Query 1105 GGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGAAGCTTCAGGAAGAGGAGCTAATAGAG 1164 ||||| |||||| | |||||||||||||| ||||||||||| ||| ||||||||||||| Sbjct 1244 GGTCGTGCTTCTACTGCAGAAAAGAAACTAGAGAAGCTTCAAGAACAGGAGCTAATAGAA 1303 Query 1165 AAGCCATTTCAGCGGAAACAAATGAAAATCCGGTTTCCGGAATGTGGATTAAGTGGAAGA 1224 |||||||||||||||||||| ||||| || ||||||| || ||||| |||||||||| Sbjct 1304 AAGCCATTTCAGCGGAAACAGATGAAGATAAGGTTTCCAGAGCGTGGAACAAGTGGAAGA 1363 Query 1225 TCTGTAGTCACTGTTAAGAATC-TTGTATTT-GGTTTTGATGATAAGATGTTATTTAACA 1282 || ||||||| |||||| || | ||| |||| ||||| || ||||||||| ||||||| | Sbjct 1364 TCGGTAGTCAATGTTAAAAA-CATTG-ATTTTGGTTTCGAGGATAAGATGCTATTTAAGA 1421 Query 1283 AGGCGAATCTAGCTATAGAAAGAGGAGAGAAAGTCGCTATAATTGGTCCAAACGGGTGCG 1342 |||| |||||| | ||||||||||| |||||| |||| || ||||| || ||||| |||| Sbjct 1422 AGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCGCCATTATTGGCCCGAACGGTTGCG 1481 Query 1343 GAAAGAGTACATTGCTGAAACTTA-TTATGGGTTTGGAGAAGCCTATGAGAGGTGAGGTG 1401 |||||||||| || |||| ||| |||||||||| || |||||||||| |||||| || Sbjct 1482 GAAAGAGTACGTTATTGAAG-TTAATTATGGGTTTAGAAAAGCCTATGAAAGGTGAAGTT 1540 Query 1402 ATACTTGGGGAGCACAATGTATTGCCAAACTACTTCGAGCAGAATCAGGCAGAGGCTCAA 1461 || ||||| |||||||||||| ||||||||||||| || ||||||||||| |||| || Sbjct 1541 ATTCTTGGAGAGCACAATGTACTGCCAAACTACTTTGAACAGAATCAGGCCGAGG-TCCT 1599 Query 1462 -GATTTGGATAAAACGGTGATTGAGACAGTT-GTTGAAGCTGCTGTAGATTGGAGAATTG 1519 |||||||||||||| ||| |||| |||||| || |||||||| | ||| ||||||| || Sbjct 1600 TGATTTGGATAAAACAGTGCTTGAAACAGTTTGT-GAAGCTGCAGAAGACTGGAGAAGTG 1658 Query 1520 ATGATATAAAAGCTCTTCTTGGTCGGTGCAACTTCAAAGCTGACATG-TTGGATAGAAAG 1578 |||||||||||| ||||||||| || |||||||||||||| |||||| ||| || ||||| Sbjct 1659 ATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAAGCAGACATGCTTG-ATCGAAAG 1717 Query 1579 GTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCTTTCTGCAAATTCATGGTGAAA 1638 ||||||||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct 1718 GTCTCTCTTTTAAGCGGTGGTGAGAAAGCGCGTCTTGCTTTCTGCAAATTCATGGTGACG 1777 Query 1639 CCATCCACTCTACTTGTGT-TGGACGAACCCACCAATCACTTAGACATACCTTCAAAAGA 1697 ||||| ||| | || || | |||||||||| || |||||||||||||| ||||||||||| Sbjct 1778 CCATCAACTTTTCTCGT-TCTGGACGAACCAACTAATCACTTAGACATTCCTTCAAAAGA 1836 Query 1698 AATGCTTGAGGAAGCTATAAATGAGTACAAAGGCACGGTCATCACAGTCTCACACGATAG 1757 ||||||||||||||| ||||| |||||| |||| || |||||| | || || |||||| | Sbjct 1837 AATGCTTGAGGAAGCGATAAACGAGTACCAAGGTACAGTCATCGCGGTATCCCACGATCG 1896 Query 1758 ATACTTCATTAAACAGATTGTTAACAGAGTTATTGAAGTCAGAG-ATGGTGGTTTA-ATG 1815 |||||| || ||||| || ||||||||||| || ||||| |||| ||||| ||||| | | Sbjct 1897 ATACTTTATCAAACAAATCGTTAACAGAGTGATAGAAGT-AGAGGATGGTTGTTTAGAAG 1955 Query 1816 GACTATGCAGGAGACTACAATTATTTCCTGGAGAAGAATGTTGAAGCTAGAGCAAGGGAG 1875 | |||||||| ||||||||||||| | ||||||||||| | || ||||| |||| ||| Sbjct 1956 -ATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTGGATGCTAGGGCAAAAGAG 2014 Query 1876 CTGGAGAGGGAAGCAGAATTGGAAGAAAAAGCTCCAAAAGTGAAAGCAAAGTCAAAGATG 1935 |||||||| |||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct 2015 CTGGAGAGAGAAGCAGAGCTAGAAGAGAAAGCTCCAAAAGTGAAGGCAAAGTCAAAGATG 2074 Query 1936 TCAAAGGCTGAGAGAGAAGC-ACGGAAGAAGCAAAAGATGAAAGCGTTTCAAGCTTCCAA 1994 ||||| ||||||| |||||| | |||||||||| |||||| ||||||||||| | | | Sbjct 2075 TCAAAAGCTGAGAAAGAAGCGA-GGAAGAAGCAGAAGATGCAAGCGTTTCAA-CAAGCTA 2132 Query 1995 AA-AGAAGTCAAAGTCCAGCAAAAA-TGCCAAGAGATGGAA 2033 || |||| |||||| | ||||| || | ||||||||||||| Sbjct 2133 AACAGAAATCAAAGGCTAGCAAGAACT-CCAAGAGATGGAA 2172 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76599482695 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5