BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G13380.1
Length=2034
Score E
Sequences producing significant alignments: (Bits) Value
Ahg488157 jgi|Araly1|488157|fgenesh2_kg.6__1291__AT5G13380.1 2905 0.0
Ahg940804 jgi|Araly1|940804|scaffold_601348.1 2806 0.0
Ahg488154 jgi|Araly1|488154|fgenesh2_kg.6__1288__AT5G13360.1 1941 0.0
Ahg488153 jgi|Araly1|488153|fgenesh2_kg.6__1287__AT5G13350.1 1733 0.0
> Ahg488157 jgi|Araly1|488157|fgenesh2_kg.6__1291__AT5G13380.1
Length=1963
Score = 2905 bits (1573), Expect = 0.0
Identities = 1842/1971 (93%), Gaps = 21/1971 (1%)
Strand=Plus/Plus
Query 2 TAATGCTTAACTTGCTTCCGCGGCCCTGTCGGAAACTCATCCTCAATTTCCGGCTCACGA 61
||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||||
Sbjct 1 TAATGCTTAACTTGCCTCCTCATCCCTGTCGGAAACTCATCCTCAATTTCCGGCACACGA 60
Query 62 ACTTTTTGCCAC---ATGACACCTTTTATCTGCACagagagagagagagaTGGGTCAGAT 118
||||| |||||| || |||||||||||||| | || |||||||| || ||||
Sbjct 61 ACTTTCTGCCACTTTATCACACCTTTTATCTG--C----AGCGAGAGAGA--GGCCAGAG 112
Query 119 CCAATCCACTGCAGCCAGCGCAAAGACAATAGAAAAGCAGCAATCATGTTGCCAAAGTTC 178
||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||
Sbjct 113 ACAATCCACTGCAGCCAGAGCAAAGACGATAAAAAAGCAGCAATCATGTTGCCAAAGTTC 172
Query 179 GATCCAACAAACCCATTAGCTACCATGTCTGTTCTTGAGGATGTGACGACCAACGTAAAG 238
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 GATCCAACAAACCTATTAGCTACCATGTCTGTTCTTGAGGATGTGACGACCAACGTAAAC 232
Query 239 AAAATTCAAGATTCCCTCTTGGAAGCAATACTTTCACGTAATAG-TCAGACCGAGTACCT 297
|||||||||||||| | |||||||||||||||||||||||| | |||||||||||||||
Sbjct 233 AAAATTCAAGATTCTGTGTTGGAAGCAATACTTTCACGTAAT-GCTCAGACCGAGTACCT 291
Query 298 TAGAGGTTTCCTCACCGGTCAACTCGATAAGCAGAGCTTCAAGAAGAACGTACCCATTGT 357
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 292 TAGAGGTTTCCTCAACGGTCAACTCGATAAGCAGAGCTTCAAGAAGAACCTACCCATTGT 351
Query 358 GACCTACGAAGATATTAAGCCTCATATCGATCGCATCGCTAATGGAGAGCCGTCTGATCT 417
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 352 GACCTACGAAGTTATTAAGCCTCATATCGATCGTATCGCTAATGGAGAGCCGTCTGATCT 411
Query 418 CATTTGTGATCGACCCATCAGTCTTCTCTTGGCCACCACGGGAACTTCAGGAGGTATTCC 477
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 CATTTGTGATCGACACATCAGTCTTCTCTTGGCCACCACGGGAACTTCAGGAGGTATTCC 471
Query 478 AAAGTTGATTCCTCTGACAGCAGAGGAATTGGAACAGAGGATATTGTTTGGGTTTCTCTA 537
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 472 AAAGTTGATTCCTCTGACAGCAGAGGAATTGGAACAGAGGATATTGTTTGGATTTCTCTA 531
Query 538 TGTACCTCTAGTCTTCAAACACATCGAAGGGCTAACCCAAGGCAAATCTCTCATGTTTTA 597
|| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct 532 TGCACCTCTAGTCTTCAAGCACATCGAAGGGCTTACTCAAGGCAAATCTCTCATGTTTTA 591
Query 598 TTTTGTGACCCGAGAAAGCGAGACTGTCTCTGGACTGATGGTCAGGTTTATGATCACTTG 657
||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||
Sbjct 592 TTTTGTGACTCGAGAAAGCGAGACTGCCTCTGGATTGATGGTCAGGTTTATGATAACTTG 651
Query 658 TGTTTTGAAAAGCGTGAACCCAACCAACTCATTTCTTTGGGATCGAGTACAAATAAGCCC 717
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 652 TGTTTTGAAAAGCGTGAACCCAACCAATTCGTTTCTTTGGGATCGAGTACAAATAAGCCC 711
Query 718 GCATGCAATTGCGATTTGTGAAGACACTAATCAGGGCATGTACTGCCAATTGCTTTGTGG 777
|||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 712 GCATGCGATTGCGATTTGTGAAGACACTAATCAAGCCATGTACTGCCAATTGCTTTGTGG 771
Query 778 ACTTCTCCAACGAGAACATGTAGCTCGCCTAGGTGCGCCTTATGCTTCTTCCTTCCTCAA 837
||||| ||||| ||| ||||||||||||||||||| || |||||||||||||| |||||
Sbjct 772 GCTTCTACAACGCGAAAATGTAGCTCGCCTAGGTGCACCCTATGCTTCTTCCTTTCTCAA 831
Query 838 AGTAATAAAGTTTTTGGAAGATCATTGGCCTGAGTTATGCTCTAACATAAGGACTGGCCG 897
|||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 832 AGTAATCAAGTTTTTGGAAGATCATTGGCATGAGTTATGCTCAAACATAAGGACTGGCCG 891
Query 898 TCTCAGCGACTGGATCACAGACGCCCAATGTGTTTCAGGGATCGGTAACTTCCTCACCGC 957
||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 892 TCTCAGCGACTGGATAACAGACGCCCAATGTGTTTCAGGGATCAGTAAGTTCCTCACCGC 951
Query 958 TCCAGATCCGGACCTAGCAAACCTGATCGAACAAGAATGCAGTAAAACCTCATGGGAGGC 1017
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 952 TCCAAATCCGGACCTAGCGAACCTGATCGAACAAGAATGCAGTAAAACCTCATGGGAGGC 1011
Query 1018 AATATTGAGTAGAATTTGGCCAAAAGCAAAATGTATAGAAGCCGTCATTACCGGCACCAT 1077
||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 AATATTGAGGAGACTATGGCCAAAAGCAAAATGTATAGAAGCCGTCATTACCGGCACCAT 1071
Query 1078 GGCACAGTACATACCATTGCTGGAATTCTATGGCGGTGGTCTTCCTTTGGTTTCATCATG 1137
|||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||||| ||
Sbjct 1072 GGCACAGTACATTCCGTTGCTTGAATTTTATGGTGGTGGTCTTCCTTTGGTTTCATCTTG 1131
Query 1138 GTATGGCAGCTCCGAATGTTTCATCGGTATCAATCTCAATCCTCTGTCTAAGCCTAGTGA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 GTATGGCAGCTCCGAATGTTTCATCGGTATCAATCTCAATCCTCTGTCTAAGCCTAGTGA 1191
Query 1198 TGTGTCGTACACCATCATTCCAAGTATGGGGTACTTTGAGTTCATTGAGGTCGTGAAAGA 1257
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1192 TGTGTCGTACACCATCATTCCAAGTATGGGGTATTTTGAGTTCATTGAGGTTGTGAAAGA 1251
Query 1258 CCGTCAAGAAGCTGGCCATGTTCCCGCAGACCCTGTGGTGGTCGACCTCGTCGATGTTAA 1317
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1252 CCGTCAAGAAGCTGGCCATGTTCCCGCAGACCCTGTGGTGGTCGATCTCGTCGATGTTAA 1311
Query 1318 AATTGGCCATGATTATGAACTTCTTGTCACAACGTTTTCTGGT------CTGTATAGGTA 1371
||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1312 AATTGGCCATGATTATGAACTTCTTGTCACAACGTTTTCTGGTAAGTTTCTCTATAGGTA 1371
Query 1372 CCGTTTAGGGGATGTTTTACGAGTGACTGGTTTCCACAACAATGCGCCACAATTTTACTT 1431
||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct 1372 CCGTTTAGGAGATGTTTTACGGGTGACTGGTTTTCACAACAATGCGCCACAGTTTTATTT 1431
Query 1432 CGTGGGGAGACAGAATGTAGTTCTGAGCATCGACTTGAGCAAGACCTACGAAGAAGACCT 1491
|||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 CGTGGGAAGGCAGAAAGTTGTTCTGAGCATCGACTTGAGCAAGACCTACGAAGAAGACCT 1491
Query 1492 TCTCAAGGCAGTGAAAAACGCGAGTCTCCTGCTTGAGCCACATGACCTGATGCTCATGGA 1551
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1492 CCTCAAGGCCGTGAAAAACGCGAGTCTCCTGCTCGAGCCACATGACCTGATGCTCATGGA 1551
Query 1552 TTTCACTAGCCGTGTAGATCTATCCTCGTTGCCAGGACACTACGTGCTCTATTGGGAACT 1611
||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct 1552 TTTCACTAGCCGTGTGGATCTTTCCTCGTTGCCCGGACACTATGTGCTCTATTGGGAACT 1611
Query 1612 TGGTAACAAATTCAAGAACGCCAAGCTCG-ATCCCAAATCTAATGTCTTGGAGGAATGTT 1670
|| | ||||||||||||||| ||||| | | ||||| || |||||||||||||||||||
Sbjct 1612 CGGGAGCAAATTCAAGAACGCGAAGCT-GTACCCCAACTCCAATGTCTTGGAGGAATGTT 1670
Query 1671 GCTTAACCGTTGAGGAGTCTCTCGACTCTATCTACAGAGAAGGACGAAAAAATGATAAGA 1730
|||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct 1671 GCTTAACCGTTGAGGAGTCTCTAGACTCTGTCTACAGAAAAGGACGAAAAAATGATAAGA 1730
Query 1731 TCATTGGACCACTTGAGATTAAGGTAGTTAAACCTGGCGCTTTTGATGAGCTCATGAATT 1790
||||||||||||||||||||||||| || |||||||||||||| || |||||||||||||
Sbjct 1731 TCATTGGACCACTTGAGATTAAGGTTGTCAAACCTGGCGCTTTCGACGAGCTCATGAATT 1790
Query 1791 TCTTCTTGTCTCGAGGCTCTTCTGTGAGTCAGTACAAGACTCCAAGGTCAGTGACGCATG 1850
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1791 TCTTCTTGTCTCGAGGCTCTTCTGTGAGTCAGTACAAGACACCAAGGTCAGTGACACATG 1850
Query 1851 AAGAAGCCTTGAATATATTGGAGTCGAACGTTGTTTCCGAGTTTCTTAGCCGGAAAACTC 1910
||| ||||||||| ||| | |||||||| |||| || | |||||||||||||||||| ||
Sbjct 1851 AAGGAGCCTTGAAGATACTAGAGTCGAAAGTTGCTTACAAGTTTCTTAGCCGGAAAAGTC 1910
Query 1911 CGTCGTGGGAGCTACATGAGCTACATTCCAGCCGTTAAAACCACCGTTACA 1961
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1911 CGTCGTGGGAGCTACATGAGCTACATTCCAGCCGTTAAAACCGCCGTTACA 1961
> Ahg940804 jgi|Araly1|940804|scaffold_601348.1
Length=3043
Score = 2806 bits (1519), Expect = 0.0
Identities = 1721/1821 (95%), Gaps = 4/1821 (0%)
Strand=Plus/Plus
Query 143 GACAATAGAAAAGCAGCAATCATGTTGCCAAAGTTCGATCCAACAAACCCATTAGCTACC 202
||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1218 GACGATAAAAAAGCAGCAATCATGTTGCCAAAGTTCGATCCAACAAACCTATTAGCTACC 1277
Query 203 ATGTCTGTTCTTGAGGATGTGACGACCAACGTAAAGAAAATTCAAGATTCCCTCTTGGAA 262
||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct 1278 ATGTCTGTTCTTGAGGATGTGACGACCAACGTAAACAAAATTCAAGATTCTGTGTTGGAA 1337
Query 263 GCAATACTTTCACGTAATAG-TCAGACCGAGTACCTTAGAGGTTTCCTCACCGGTCAACT 321
|||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||
Sbjct 1338 GCAATACTTTCACGTAAT-GCTCAGACCGAGTACCTTAGAGGTTTCCTCAACGGTCAACT 1396
Query 322 CGATAAGCAGAGCTTCAAGAAGAACGTACCCATTGTGACCTACGAAGATATTAAGCCTCA 381
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1397 CGATAAGCAGAGCTTCAAGAAGAACCTACCCATTGTGACCTACGAAGTTATTAAGCCTCA 1456
Query 382 TATCGATCGCATCGCTAATGGAGAGCCGTCTGATCTCATTTGTGATCGACCCATCAGTCT 441
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1457 TATCGATCGTATCGCTAATGGAGAGCCGTCTGATCTCATTTGTGATCGACACATCAGTCT 1516
Query 442 TCTCTTGGCCACCACGGGAACTTCAGGAGGTATTCCAAAGTTGATTCCTCTGACAGCAGA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1517 TCTCTTGGCCACCACGGGAACTTCAGGAGGTATTCCAAAGTTGATTCCTCTGACAGCAGA 1576
Query 502 GGAATTGGAACAGAGGATATTGTTTGGGTTTCTCTATGTACCTCTAGTCTTCAAACACAT 561
||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct 1577 GGAATTGGAACAGAGGATATTGTTTGGATTTCTCTATGCACCTCTAGTCTTCAAGCACAT 1636
Query 562 CGAAGGGCTAACCCAAGGCAAATCTCTCATGTTTTATTTTGTGACCCGAGAAAGCGAGAC 621
||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1637 CGAAGGGCTTACTCAAGGCAAATCTCTCATGTTTTATTTTGTGACTCGAGAAAGCGAGAC 1696
Query 622 TGTCTCTGGACTGATGGTCAGGTTTATGATCACTTGTGTTTTGAAAAGCGTGAACCCAAC 681
|| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1697 TGCCTCTGGATTGATGGTCAGGTTTATGATAACTTGTGTTTTGAAAAGCGTGAACCCAAC 1756
Query 682 CAACTCATTTCTTTGGGATCGAGTACAAATAAGCCCGCATGCAATTGCGATTTGTGAAGA 741
||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1757 CAATTCGTTTCTTTGGGATCGAGTACAAATAAGCCCGCATGCGATTGCGATTTGTGAAGA 1816
Query 742 CACTAATCAGGGCATGTACTGCCAATTGCTTTGTGGACTTCTCCAACGAGAACATGTAGC 801
||||||||| | |||||||||||||||||||||||| ||||| ||||| ||| |||||||
Sbjct 1817 CACTAATCAAGCCATGTACTGCCAATTGCTTTGTGGGCTTCTACAACGCGAAAATGTAGC 1876
Query 802 TCGCCTAGGTGCGCCTTATGCTTCTTCCTTCCTCAAAGTAATAAAGTTTTTGGAAGATCA 861
|||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1877 TCGCCTAGGTGCACCCTATGCTTCTTCCTTTCTCAAAGTAATCAAGTTTTTGGAAGATCA 1936
Query 862 TTGGCCTGAGTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACGC 921
||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1937 TTGGCATGAGTTATGCTCAAACATAAGGACTGGCCGTCTCAGCGACTGGATAACAGACGC 1996
Query 922 CCAATGTGTTTCAGGGATCGGTAACTTCCTCACCGCTCCAGATCCGGACCTAGCAAACCT 981
||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| |||||
Sbjct 1997 CCAATGTGTTTCAGGGATCAGTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAACCT 2056
Query 982 GATCGAACAAGAATGCAGTAAAACCTCATGGGAGGCAATATTGAGTAGAATTTGGCCAAA 1041
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct 2057 GATCGAACAAGAATGCAGTAAAACCTCATGGGAGGCAATATTGAGGAGACTATGGCCAAA 2116
Query 1042 AGCAAAATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATACCATTGCTGGA 1101
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 2117 AGCAAAATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATTCCGTTGCTTGA 2176
Query 1102 ATTCTATGGCGGTGGTCTTCCTTTGGTTTCATCATGGTATGGCAGCTCCGAATGTTTCAT 1161
||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2177 ATTTTATGGTGGTGGTCTTCCTTTGGTTTCATCTTGGTATGGCAGCTCCGAATGTTTCAT 2236
Query 1162 CGGTATCAATCTCAATCCTCTGTCTAAGCCTAGTGATGTGTCGTACACCATCATTCCAAG 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2237 CGGTATCAATCTCAATCCTCTGTCTAAGCCTAGTGATGTGTCGTACACCATCATTCCAAG 2296
Query 1222 TATGGGGTACTTTGAGTTCATTGAGGTCGTGAAAGACCGTCAAGAAGCTGGCCATGTTCC 1281
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2297 TATGGGGTATTTTGAGTTCATTGAGGTTGTGAAAGACCGTCAAGAAGCTGGCCATGTTCC 2356
Query 1282 CGCAGACCCTGTGGTGGTCGACCTCGTCGATGTTAAAATTGGCCATGATTATGAACTTCT 1341
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2357 CGCAGACCCTGTGGTGGTCGATCTCGTCGATGTTAAAATTGGCCATGATTATGAACTTCT 2416
Query 1342 TGTCACAACGTTTTCTGGTCTGTATAGGTACCGTTTAGGGGATGTTTTACGAGTGACTGG 1401
||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 2417 TGTCACAACGTTTTCTGGTCTCTATAGGTACCGTTTAGGAGATGTTTTACGGGTGACTGG 2476
Query 1402 TTTCCACAACAATGCGCCACAATTTTACTTCGTGGGGAGACAGAATGTAGTTCTGAGCAT 1461
||| ||||||||||||||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 2477 TTTTCACAACAATGCGCCACAGTTTTATTTCGTGGGAAGGCAGAAAGTTGTTCTGAGCAT 2536
Query 1462 CGACTTGAGCAAGACCTACGAAGAAGACCTTCTCAAGGCAGTGAAAAACGCGAGTCTCCT 1521
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 2537 CGACTTGAGCAAGACCTACGAAGAAGACCTCCTCAAGGCCGTGAAAAACGCGAGTCTCCT 2596
Query 1522 GCTTGAGCCACATGACCTGATGCTCATGGATTTCACTAGCCGTGTAGATCTATCCTCGTT 1581
||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2597 GCTCGAGCCACATGACCTGATGCTCATGGATTTCACTAGCCGTGTGGATCTTTCCTCGTT 2656
Query 1582 GCCAGGACACTACGTGCTCTATTGGGAACTTGGTAACAAATTCAAGAACGCCAAGCTCG- 1640
||| |||||||| ||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct 2657 GCCCGGACACTATGTGCTCTATTGGGAACTCGGGAGCAAATTCAAGAACGCGAAGCT-GT 2715
Query 1641 ATCCCAAATCTAATGTCTTGGAGGAATGTTGCTTAACCGTTGAGGAGTCTCTCGACTCTA 1700
| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2716 ACCCCAACTCCAATGTCTTGGAGGAATGTTGCTTAACCGTTGAGGAGTCTCTAGACTCTG 2775
Query 1701 TCTACAGAGAAGGACGAAAAAATGATAAGATCATTGGACCACTTGAGATTAAGGTAGTTA 1760
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2776 TCTACAGAAAAGGACGAAAAAATGATAAGATCATTGGACCACTTGAGATTAAGGTTGTCA 2835
Query 1761 AACCTGGCGCTTTTGATGAGCTCATGAATTTCTTCTTGTCTCGAGGCTCTTCTGTGAGTC 1820
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2836 AACCTGGCGCTTTCGACGAGCTCATGAATTTCTTCTTGTCTCGAGGCTCTTCTGTGAGTC 2895
Query 1821 AGTACAAGACTCCAAGGTCAGTGACGCATGAAGAAGCCTTGAATATATTGGAGTCGAACG 1880
|||||||||| |||||||||||||| ||||||| ||||||||| ||| | |||||||| |
Sbjct 2896 AGTACAAGACACCAAGGTCAGTGACACATGAAGGAGCCTTGAAGATACTAGAGTCGAAAG 2955
Query 1881 TTGTTTCCGAGTTTCTTAGCCGGAAAACTCCGTCGTGGGAGCTACATGAGCTACATTCCA 1940
||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2956 TTGCTTACAAGTTTCTTAGCCGGAAAAGTCCGTCGTGGGAGCTACATGAGCTACATTCCA 3015
Query 1941 GCCGTTAAAACCACCGTTACA 1961
|||||||||||| ||||||||
Sbjct 3016 GCCGTTAAAACCGCCGTTACA 3036
Score = 1319 bits (714), Expect = 0.0
Identities = 1053/1216 (87%), Gaps = 25/1216 (2%)
Strand=Plus/Plus
Query 157 AGCAATCATGTTGCCAAAGTTCGATCCAACAAACCCATTAGC-TACCATGTCTGTTCTTG 215
||||||||||||||||||||||||||||||| ||| | ||| | | ||||| ||||||
Sbjct 14 AGCAATCATGTTGCCAAAGTTCGATCCAACAGACCAAAAAGCTTGTC-TGTCTCTTCTTG 72
Query 216 AGGATGTGACGACCAACGTAAAGAAAATTCAAGATTCCCTCTTGGAAGCAATACTTTCAC 275
||||| |||| |||||||||||| | |||||||||||| |||||||||||||||||||||
Sbjct 73 AGGATTTGACCACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAATACTTTCAC 132
Query 276 GTAATAG-TCAG-ACCGAGTACCTTAGAGGTTTCCTCACCGGTCAACTCGATAAGCAGAG 333
||||| | || | || ||||| ||||| |||||||||| ||||||| |||||||||||||
Sbjct 133 GTAAT-GCTC-GTACGGAGTATCTTAGTGGTTTCCTCAACGGTCAAGTCGATAAGCAGAG 190
Query 334 CTTCAAGAAGAACGTACCCATTGTGACCTACGAAGATATTAAGCCTCATATCGATCGCAT 393
||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||| ||
Sbjct 191 CTTCAAGAACAACGTACCTGTTGTGACCTACGAAGATATTAGGCCTTATATCGATCGTAT 250
Query 394 CGCTAATGGAGAGCCGTCTGATCTCATTTGTGATCGACCCATCAGTCTTCTCTTGGCCAC 453
||||||||||||||||||||||||||| ||||||||||| |||||| | |||||| |||
Sbjct 251 CGCTAATGGAGAGCCGTCTGATCTCATCTGTGATCGACCTATCAGTGTACTCTTGACCAG 310
Query 454 CACGGGAACTTCAGGAGGTA-TTCCAAAGTTGATTCCTCTGACAGCAGAGGAATTGGAAC 512
|||| ||||||||||| | |||||||||| |||||| ||||| ||||||| |||||||
Sbjct 311 TTCGGGTACTTCAGGAGG-AGTTCCAAAGTTAATTCCTTTGACAACAGAGGATTTGGAAC 369
Query 513 AGAGGATATT-GTTTGGGTT-TCTCTATGTACCTCTAGTCTTCAAACACATCGAAGGGCT 570
||||||| || |||| || |||||||| ||||||| || ||| |||||||| |||||
Sbjct 370 AGAGGAT-TTCGTTT-TCTTCTCTCTATGCACCTCTACTCAACAAGCACATCGATGGGCT 427
Query 571 AACCCAAGGCAAATCTCTCATGTTTTATTTTGTGACCCGAGAAAGCGAGACTGTCTCTGG 630
| | |||| ||||||||||| |||||||||||||||||||||||| |||||| | |||
Sbjct 428 TAGCGAAGGAAAATCTCTCATATTTTATTTTGTGACCCGAGAAAGCAAGACTGCCAATGG 487
Query 631 ACTGATGGTCAGGTTTATGATCACTTGTGTTTTGAAAAGCGTGAACCCAACCAACTCATT 690
||||||||||| |||| | ||| || ||||||||||||| || ||||||| |||||
Sbjct 488 GTTGATGGTCAGGACTATGGTAACTAGTTTTTTGAAAAGCGTTAAACCAACCAGTTCATT 547
Query 691 TCTTTGGGATCGAGTACAAATAAGCCCGCATGCAATTGCGATTTGTGAAGACACTAATCA 750
||||||||||||| |||| ||||||||||| || ||| ||| ||||| |||||||| |||
Sbjct 548 TCTTTGGGATCGATTACAGATAAGCCCGCACGCGATTACGACTTGTGCAGACACTACTCA 607
Query 751 GGGCATGTACTGCCAATTGCTTTGTGGACTTCTCCAACGAGA-ACATGTAGCTCGCCTAG 809
| ||||||||||||||||||||||||| ||||| || |||| | |||| |||||||| |
Sbjct 608 GAGCATGTACTGCCAATTGCTTTGTGGGCTTCTTGAAAGAGATA-ATGTTGCTCGCCTTG 666
Query 810 GTGC-GCCTTATGCTTCTTCCTTCCTCAAAGTAATAAAGTTTTTGGAAGATCATTGGCCT 868
|||| |||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 667 GTGCACCCTT-TGCTTCATCCTTCCTCAAAGTAATCAAGTTCTTGGAAGATCATTGGCCT 725
Query 869 GAGTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACGCCCAATGT 928
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 726 GAGTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACTCGCAATGT 785
Query 929 G-TTTCAGGGATCGGTAACTTCCTCACCGCTCCAGATCCGGACCTAGCAAACCTGATCGA 987
||| ||||| ||||| |||||||| || ||| ||||||| ||||| | |||||||||
Sbjct 786 ACTTTG-GGGATTGGTAAGTTCCTCACTGCACCATATCCGGAACTAGCGAGCCTGATCGA 844
Query 988 ACAAGAATGCAGTAAAACCTCATGGGAGGCAATATTGAGTAGAATTTGGCCAAAAGCAAA 1047
|||||||||||||||| |||||||||||| || |||| ||| | ||||||||||||||
Sbjct 845 GCAAGAATGCAGTAAAAAATCATGGGAGGCAGTAGTGAGGAGACTATGGCCAAAAGCAAA 904
Query 1048 ATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATACCATTGCTGGAATTCTA 1107
||| || ||| || ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 905 ATGCATCGAAACCATCATTACAGGCACCATGGCACAGTACATTCCATTGCTGGAATTCTA 964
Query 1108 TGGCGGTGGTCTTCCTTTGGTTTCATCATGGTATGGCAGCTCCGAATGTTTCATCGGTAT 1167
| ||||||||||||||||| |||||| | ||||||||||| ||||||||||| ||| |
Sbjct 965 TAGCGGTGGTCTTCCTTTGACTTCATCGTTTTATGGCAGCTCTGAATGTTTCATGGGTGT 1024
Query 1168 CAA-TCTCAATCCTCTGTCTAAGCCTAGTGATGTGTCGTACACCATCATTCCAAGTATGG 1226
||| | | |||||||||| ||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1025 CAACTTT-AATCCTCTGTGTAAGCCTTGTGATGTGTCGTACACCATCATTCCATGTATGG 1083
Query 1227 GGTACTTTGAGTTCATT-GAGGTCGTGAAAGACCGTCAAGAAGCTGGCCATGTTCCCGCA 1285
||||||| |||||| || ||||||| |||||||| |||||||||||| |||| |||| ||
Sbjct 1084 GGTACTTCGAGTTC-TTAGAGGTCGAGAAAGACCATCAAGAAGCTGGTCATGATCCCACA 1142
Query 1286 G--AC-CCTGTGGTGGTCGACCTCGTCGATGTTAAAATTGGCCATGATTATGAACTTCTT 1342
| | |||||||| ||||| || || ||||||||||| |||||||||||||||| | ||
Sbjct 1143 GCGAAACCTGTGGTTGTCGATCTTGTGGATGTTAAAATCGGCCATGATTATGAACCTGTT 1202
Query 1343 GTCACAACGTTTTCTG 1358
|||||||| |||||||
Sbjct 1203 GTCACAACCTTTTCTG 1218
> Ahg488154 jgi|Araly1|488154|fgenesh2_kg.6__1288__AT5G13360.1
Length=2115
Score = 1941 bits (1051), Expect = 0.0
Identities = 1574/1824 (86%), Gaps = 46/1824 (3%)
Strand=Plus/Plus
Query 154 AGC-AGCAATCATGTTGCCAAAGTTCGATCCAACAAACCCATTAGC-TACCATGTCTGTT 211
||| ||||||||||||||||||||||||||||||| ||| | ||| | | ||||| ||
Sbjct 214 AGCAAGCAATCATGTTGCCAAAGTTCGATCCAACAGACCAAAAAGCTTGTC-TGTCTCTT 272
Query 212 CTTGAGGATGTGACGACCAACGTAAAGAAAATTCAAGATTCCCTCTTGGAAGCAATACTT 271
||||| ||||||||||||||||||||| | |||||||||||| | |||||||||||||||
Sbjct 273 CTTGAAGATGTGACGACCAACGTAAAGCAGATTCAAGATTCCGTTTTGGAAGCAATACTT 332
Query 272 TCACGTAATAG-TCAGACCGAGTACCTTAGAGGTTTCCTCACCGGTCAACTCGATAAGCA 330
||||||||| | ||| |||||||| ||||| ||||| |||| ||||||| | ||||| ||
Sbjct 333 TCACGTAAT-GCTCATACCGAGTATCTTAGTGGTTTTCTCAACGGTCAAGTTGATAAACA 391
Query 331 GAGCTTCAAGAAGAACGTACCCATTGTGACCTACGAAGATATTAAGCCTCATATCGATCG 390
||||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct 392 GAGCTTCAAAAAGAACCTACCCGTTGTGACCTACGAAGATATTAGGCCTTATATCGATCG 451
Query 391 CATCGCTAATGGAGAGCCGTCTGATCTCATTTGTGATCGACCCATCAGTCTTCTCTTGGC 450
||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |
Sbjct 452 TATCGCTAATGGAGAGCCGTCTGATCTCATCTGTGATCGACCCATCAGTGTACTCTTGAC 511
Query 451 CACCACGGGAACTTCAGGAGGTA-TTCCAAAGTTGATTCCTCTGACAGCAGAGGAATTGG 509
|| | | || ||||||||||| | ||||||||||||||||| ||||| |||| ||||| |
Sbjct 512 CAGCTCCGGTACTTCAGGAGG-AGTTCCAAAGTTGATTCCTTTGACAACAGATGAATTAG 570
Query 510 AACAGAGGATATT-GTTTGGGTT-TCTCTAT-GTACCTCTAGTCTTCAAACACATCGAAG 566
|||||||||| || |||| | || ||||||| | ||||||| ||| ||| || |||| |
Sbjct 571 AACAGAGGAT-TTCGTTT-GCTTCTCTCTATAG-ACCTCTACTCTACAAGTACGTCGAGG 627
Query 567 GGCTAACCCAAGGCAAATCTCTCATGTTTTATTTTGTGACCCGAGAAAGCGAGACTGTC- 625
|| | | || | |||||| ||||||| ||||| |||||||||||||||||||||| |
Sbjct 628 GGATTAGAGAAAGAAAATCTTTCATGTTATATTTCGTGACCCGAGAAAGCGAGACTG-CT 686
Query 626 TCT-GGACTGA-TGGTCAGGTTTATGATCACTTGTGTTTTGAAAAGCGTGAACCCAACCA 683
||| ||| | | |||||||| |||||| ||||||||||||||||||||||| ||| | |
Sbjct 687 TCTGGGA-T-ACTGGTCAGGACTATGATAACTTGTGTTTTGAAAAGCGTGAAGCCATCTA 744
Query 684 ACTCATTT-CTTTGGGATCGAGTACAAATAAGCCCGCATGCAATTGCGATTTGTGAAGAC 742
|||| ||| | ||||||| | ||| ||||| ||||||| |||| | | |||| |||
Sbjct 745 ACTC-TTTAATCTGGGATCAAACACAGATAAGTCCGCATGGAATTTCCACTTGTTCAGAT 803
Query 743 ACTAATCAGGGCATGTACTGCCAATTGCTTTGTGGACTTCTCCAACGAGA-ACATGTAGC 801
|||| |||| |||||||||||||| |||||||||| ||||| |||||||| | ||||||
Sbjct 804 ACTACTCAGAGCATGTACTGCCAACTGCTTTGTGGGCTTCTACAACGAGATA-ATGTAGG 862
Query 802 TCGCCTAGGTGC-GCCTTATGCTTCTTCCTTCCTCAAAGTAATAAAGTTTTTGGAAGATC 860
|||||| ||||| |||| |||||| ||||||||||||||||| ||||| ||||||||||
Sbjct 863 TCGCCTTGGTGCACCCTT-TGCTTCATCCTTCCTCAAAGTAATCAAGTTCTTGGAAGATC 921
Query 861 ATTGGCCTGAGTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACG 920
| ||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct 922 ACTGGCCTGAGTTTTGCTCAAACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACC 981
Query 921 CCCAATGTGTTTCAGGGATCGGTAACTTCCTCACCGCTCCAGATCCGGACCTAGCAAACC 980
|||||||| |||||||||||||||| |||||||| ||||| |||||||| |||| | ||
Sbjct 982 CCCAATGTCTTTCAGGGATCGGTAAGTTCCTCACTGCTCCTGATCCGGAATTAGCGAGCC 1041
Query 981 TGATCGAACAAGAATGCAGTAAAACCTCATGGGAGGCAATATTG-AGTAGAATTTGGCCA 1039
|||| || |||||||||||| |||| ||||||||||||||| || || ||| ||||||||
Sbjct 1042 TGATTGAGCAAGAATGCAGTCAAACATCATGGGAGGCAATAGTGAAG-AGACTTTGGCCA 1100
Query 1040 AAAGCAAAATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATACCATTGCTG 1099
||||||||||| || |||||| | ||||||| ||||||||||||||||| ||||| |||
Sbjct 1101 AAAGCAAAATGCATCGAAGCCATTGTTACCGGTACCATGGCACAGTACATTCCATTACTG 1160
Query 1100 GAATTCTATGGCGGTGGTCTTCCTTTGGTTTCATCATGGTATGGCAGCTCCGAATGTTTC 1159
||||||||| |||| ||||||||| || ||||| | | ||||||||||| |||||||||
Sbjct 1161 GAATTCTATAGCGGCGGTCTTCCTGTGATTTCAACTTTTTATGGCAGCTCTGAATGTTTC 1220
Query 1160 ATCGGTATCAATCTCAATCCTCTGTCTAAGCCTAGTGATGTGTCGTACACCATCATTCCA 1219
|| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1221 ATTGGTCTCAATCTCAATCCTCTGAGTAAGCCTAGTGATGTGTCGTACACCATCATTCCA 1280
Query 1220 AGTATGGGGTACTTT-GAGTTCATT-GAGGTCGTGAAAGACCGTCAAGAAGCTGGCCATG 1277
|||||| ||| ||| |||||| || ||||||| ||||||| ||||||| |||| ||||
Sbjct 1281 TGTATGGCGTA-TTTCGAGTTC-TTAGAGGTCGGGAAAGACTATCAAGAAACTGGTCATG 1338
Query 1278 TTCCCG-C-AG-ACCCTGTGGTGGTCGACCTCGTCGATGTTAAAATTGGCCATGATTATG 1334
||| | | || | ||||| || ||||| || ||||||||||||||||||||||||||||
Sbjct 1339 ATCCTGCCGAGAAACCTGTTGTAGTCGATCTTGTCGATGTTAAAATTGGCCATGATTATG 1398
Query 1335 AACTTCTTGTCACAACGTTTTCTGGTCTGTATAGGTACCGTTTAGGGGATGTTTTACGAG 1394
||| | |||||||||||||| ||||| |||||||||||||||||||||| |||||| |||
Sbjct 1399 AACCTGTTGTCACAACGTTTGCTGGTTTGTATAGGTACCGTTTAGGGGACGTTTTAAGAG 1458
Query 1395 TGACTGGTTTCCACAACAATGCGCCACAATTTTAC--TTCGTGGGGAGACAGAATGTAGT 1452
||||||||||| ||||||||||||||| ||||| | |||||||| |||||||| || ||
Sbjct 1459 TGACTGGTTTCTACAACAATGCGCCAC-ATTTT-CGTTTCGTGGGAAGACAGAAAGTTGT 1516
Query 1453 TCTGAGCATCGAC-TTGAGCAAGACCTACGAAGAAGACCTTCTCAAGGCAGTGAAAAACG 1511
||||||||||||| | || ||||||||||||||||||||| ||||||||||||| |||||
Sbjct 1517 TCTGAGCATCGACATGGA-CAAGACCTACGAAGAAGACCTCCTCAAGGCAGTGACAAACG 1575
Query 1512 CG-AGTCTCCTGCTTGAGCCACATGACCTGATGCTCATGGATTTCACTAGCCGTGTAGA- 1569
|| || || ||||| |||||||||||||| ||||||||||||||| |||||||||| ||
Sbjct 1576 CGAAG-CTGCTGCTCGAGCCACATGACCTAATGCTCATGGATTTCTCTAGCCGTGTGGAT 1634
Query 1570 TCTATCCTCGTTGCCAGGACACTACGTGCTCTATTGGGAACTTGGTAACAAATTCAAGAA 1629
|| |||||||| |||||||||||||||||||| |||||||| || | |||| ||||| |
Sbjct 1635 TC-CTCCTCGTTTCCAGGACACTACGTGCTCTACTGGGAACTCGGGAGCAAAGTCAAGGA 1693
Query 1630 CGCCAAGCTCGATCCCAAATCTAATGTCTTGGAGGAATGTTGCTTAACCGTTGAGGAGTC 1689
||| ||||| || | | | | ||||| ||||||||||| ||||| ||| ||||||||||
Sbjct 1694 CGCAAAGCTTGAGCTCGACCCGAATGTTTTGGAGGAATGCTGCTTCACCATTGAGGAGTC 1753
Query 1690 TCTCGACTCTATCTACAGAGAAGGACGAAAAAATGATAAGATCATTGGACCACTTGAGAT 1749
||| ||| || | |||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct 1754 TCTTGACGCTGTGTACAGAAAAGGACGAAAGAATGATAAGAACATTGGACCACTTGAGAT 1813
Query 1750 TAAGGTAGTTAAACCTGGCGCTTTTGATGAGCTCATGAATTT-CTTCTTGTCTCGAGGCT 1808
|||||| ||||||||||||||||| || |||||||||||||| ||| ||||||||||||
Sbjct 1814 TAAGGTTGTTAAACCTGGCGCTTTCGACGAGCTCATGAATTTATTTC-TGTCTCGAGGCT 1872
Query 1809 CTTCTGTGAGTCAGTACAAGACTCCAAGGTCAGTGACGCATGAAGAAGCCTTGAATATAT 1868
|||||||||||||||||||||| || ||||| |||||| |||||||||| |||| ||||
Sbjct 1873 CTTCTGTGAGTCAGTACAAGACGCCGAGGTCGGTGACGAATGAAGAAGCGGTGAAGATAT 1932
Query 1869 TGGAGTCGAACGTTGTTTCCGAGTTTCTTAGCCGGAAAACTCCGTCGTGGGAGCTACATG 1928
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1933 TGGAGTCGAACGTTGTTTCCGAGTTTCTTAGCCGGAAAACTCCATCGTGGGAGCTACATG 1992
Query 1929 AGCTACATTCCAGCCGTTAAAACC 1952
| || | |||||||| ||| |||
Sbjct 1993 AACTGTACTCCAGCCGATAAGACC 2016
> Ahg488153 jgi|Araly1|488153|fgenesh2_kg.6__1287__AT5G13350.1
Length=1760
Score = 1733 bits (938), Expect = 0.0
Identities = 1519/1792 (85%), Gaps = 69/1792 (4%)
Strand=Plus/Plus
Query 164 ATGTTGCCAAAGTTCGATCCAACAAACCCATTAGCTA-CCATGTCTGTTCTTGAGGATGT 222
|||||||| ||||| |||| |||| ||||| ||||| || ||||| |||||||||||||
Sbjct 1 ATGTTGCCGAAGTTTGATCTAACAGACCCAAAAGCTAGCC-TGTCTCTTCTTGAGGATGT 59
Query 223 GACGACCAACGTAAAGAAAATTCAAGATTCCCTCTTGGAAGCAATACTTTCACGTAATAG 282
|||||||||||||||| | |||||||||||| ||||||||||| ||||||| |||||| |
Sbjct 60 GACGACCAACGTAAAGCAGATTCAAGATTCCGTCTTGGAAGCAGTACTTTCGCGTAAT-G 118
Query 283 -TCAGACCGAGTACCTTAGAGGTTTCCTCACCGGTCAACTCGATAAGCAGAGCTTCAAGA 341
||| |||||||| |||| ||||||||||| |||||| | |||||||| ||||||||||
Sbjct 119 CTCATACCGAGTATCTTAAAGGTTTCCTCAATGGTCAAGTTGATAAGCAAAGCTTCAAGA 178
Query 342 AGAACGTACCCATTGTGACCTACGAAGATATTAAGCCTCATATCGATCGCATCGCTAATG 401
||||||||||| |||||||||| ||||||||||||||| | |||| ||| ||||||||||
Sbjct 179 AGAACGTACCCGTTGTGACCTATGAAGATATTAAGCCTTACATCGGTCGTATCGCTAATG 238
Query 402 GAGAGCCGTCTGATCTCATTTGTGATCGACCCATCAGTCTTCTCTTG-G-CCACCACGGG 459
||||| ||||||| ||||| |||||||||||||||||| || | ||| | | | | ||
Sbjct 239 GAGAGGCGTCTGACCTCATCTGTGATCGACCCATCAGT-TTAT-TTGTGATGAGCTCTGG 296
Query 460 AACTTCAGGAGGTATTCCAAAGTTGATTCCTCTGACAGCAGAGGAATTGGAACAGAGGAT 519
||||||||||| |||| ||| ||||||||| ||||| |||||||| ||||||||||||
Sbjct 297 TACTTCAGGAGGAATTCAAAATTTGATTCCTTTGACAACAGAGGAAGGGGAACAGAGGAT 356
Query 520 ATTGTTTGGGTTTCTCTAT-GTACCTCTAGTCTTCAAACACATCGAAGGGCTAACCCAAG 578
|| ||||| | ||||||| | | ||||| ||| ||| || |||| ||| | | |||
Sbjct 357 TTTTTTTGGATCTCTCTATAG-ATCTCTACTCTACAAGTACGTCGAGGGGATTAGAGAAG 415
Query 579 GCAAATCTCTCATGTTTTATTTTGTG-ACCCGAGAAAGCGAGACT-GTCTCT-GGACTGA 635
| ||| |||||| ||| ||||| ||| |||| ||||||||||||| | |||| ||| | |
Sbjct 416 GAAAAGCTCTCACGTTCTATTTCGTGAACCC-AGAAAGCGAGACTCG-CTCTGGGA-T-A 471
Query 636 -TGGTCAGGTTTATGATCACTTGTGTTTTGAAAAGCGTGAACCCAACCAACTCATTTCTT 694
|||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 472 CTGGTCAGGACTATGATAACTTGTATTTTGAAAAGCGTGAACAAAACCAACTCATCTCTT 531
Query 695 TGGGATCGAGTACAAATAAGCCCGCATGCAATTGCGATTTGTGAAGACACTA-ATCAGGG 753
|||||| || |||| ||||||||||||| |||| ||| |||||||||||||| | || |
Sbjct 532 TGGGATAGATTACAGATAAGCCCGCATGAAATTTCGACTTGTGAAGACACTACA-CAAAG 590
Query 754 CATGTACTGCCAATTGCTTTGTGGACTTCTCCAACGAGA-ACATGTAGCTCGCCTAGGTG 812
|||||||||||||||||||||||| ||||| |||||||| | ||||||||||||| ||||
Sbjct 591 CATGTACTGCCAATTGCTTTGTGGGCTTCTACAACGAGATA-ATGTAGCTCGCCTGGGTG 649
Query 813 C-GCCTTATGCTTCT-TCCTTCCTCAAAGTAATAAAGTTTTTGGAAGATCATTGGCCTGA 870
| |||| |||||| | |||||||| |||||| ||||| |||||||||||||||| ||
Sbjct 650 CACCCTT-CGCTTCTGT-CTTCCTCAGAGTAATCAAGTTCTTGGAAGATCATTGGCAAGA 707
Query 871 GTTATGCTCTAACATAAGGACTGGCCGTCTCAGCGACTGGATCACAGACGCCCAATGTGT 930
||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 708 GTTATGCTCAAACATAAGGACTGGCCGTCTCAGTGACTGGATTACAGACGCTCAATGTGT 767
Query 931 TTCAGGGATCGGTAACTTCCTCACCGCTCCAGATCCGGACCTAGCAAACCTGATCGAACA 990
|||||||| ||||| ||||||||||||||| ||||||||||||| | ||| ||||| ||
Sbjct 768 CTCAGGGATTGGTAAGTTCCTCACCGCTCCAAATCCGGACCTAGCGAGCCTTATCGAGCA 827
Query 991 AGAATGCAGTAAAACC-TCATGGGAGGCAATAT-TG-AGTAGAATTTGGCCAAAAGCAAA 1047
|||||||||| ||||| |||||||||||||| | || || ||| |||||| |||||||||
Sbjct 828 AGAATGCAGT-AAACCTTCATGGGAGGCAAT-TGTGAAG-AGACTTTGGCGAAAAGCAAA 884
Query 1048 ATGTATAGAAGCCGTCATTACCGGCACCATGGCACAGTACATACCATTGCTGGAATTCTA 1107
||| | ||||||||| |||| ||| |||||||||||||||| || ||||||||||||||
Sbjct 885 ATGCGTGGAAGCCGTCGTTACAGGCTCCATGGCACAGTACATTCCGTTGCTGGAATTCTA 944
Query 1108 TGGCGGTGGTCTTCCTTTGGTTTCATCATGGTATGGCAGCTCCGAATGTTTCATCGGTAT 1167
||||||||||||||| ||| |||||| |||||||||||||| ||||||||||| ||| |
Sbjct 945 TGGCGGTGGTCTTCCGTTGACTTCATCGTGGTATGGCAGCTCTGAATGTTTCATGGGTGT 1004
Query 1168 CAATCTCAATCCTCTGT-CTAAGCCTAGTGATGTGTCGTACACCATCATTCCAAGTATGG 1226
|||||| |||||||||| | |||||||| |||||||||||||||||||| ||| |||||
Sbjct 1005 CAATCTTAATCCTCTGTGC-AAGCCTAGCGATGTGTCGTACACCATCATCCCATCTATGG 1063
Query 1227 GGTACTTTGAGTTCATT-GAGGTCGTGAAAGACCGTCAAGAAGCTGGCCATGTTCCC--- 1282
||||||| |||||| || |||||| |||||||| |||||||||| | || ||||
Sbjct 1064 GGTACTTCGAGTTC-TTAGAGGTCAAGAAAGACCAAAAAGAAGCTGGTCGTGATCCCATA 1122
Query 1283 GCAG-ACCCTGTGGTGGTCGACCTCGTCGATGTTAAAATTGGCCATGATTATGAACTTCT 1341
| || ||| |||||| ||||| || ||||||||||||||||||||||||||||||| | |
Sbjct 1123 G-AGAACCATGTGGTCGTCGATCTTGTCGATGTTAAAATTGGCCATGATTATGAACCTGT 1181
Query 1342 TGTCACAACGTTTTCTGGTCTGTATAGGTACCGTTTAGGG-GATGTTTTACGAGTGACTG 1400
||||||||||||||||||||| |||||||||||| | ||| ||||||||| |||| ||||
Sbjct 1182 TGTCACAACGTTTTCTGGTCTATATAGGTACCGTGT-GGGTGATGTTTTAAGAGTTACTG 1240
Query 1401 GTTTCCACAACAATGCGCCACAATTTTAC--TTCGTGGGGAGACAGAATGTAGTTCTGAG 1458
||||| |||||||| | |||| | ||| | |||||||| |||||||| || ||||||||
Sbjct 1241 GTTTCTACAACAATTCACCAC-A-TTTCCGTTTCGTGGGAAGACAGAAAGTTGTTCTGAG 1298
Query 1459 CATCGACTTGAG-CAAGACCTACGAAGAAGACCTTCTCAAGGCAGTGAAAAACGC-GAGT 1516
| || || || | ||| ||||||||||||||||| || ||||||||| |||||| ||
Sbjct 1299 CCTCCACATG-GCCAATACCTACGAAGAAGACCTCCTTAAGGCAGTGTCAAACGCAAAG- 1356
Query 1517 CTCCTGCTTGAGCCACATGACCTGATGCTCATGGA-TTTCACTAGCCGTGTAGA-TCTAT 1574
| |||||| |||||||||||||||||||||||||| ||| ||||||||||| || || |
Sbjct 1357 CGCCTGCTGGAGCCACATGACCTGATGCTCATGGAGTTT-ACTAGCCGTGTGGATTC-GT 1414
Query 1575 CCTCG-TTGCCAGGACACTACGTGCTCTATTGGGAACTTGGTAACAAATTCAAGAACGCC 1633
||||| ||| ||||||||| || |||||||||||||| || | |||| ||||| || |
Sbjct 1415 CCTCGTTTG-TAGGACACTATGTACTCTATTGGGAACTCGGGAGCAAAGTCAAGGACTCA 1473
Query 1634 AAGCTCGATCCCAAATC-TAATGTCT-TGGAGGAATGTTGCTTAACCGTTGAGGAGTCTC 1691
|||||||| || || | |||| | |||| ||||| ||||| | ||||||||||||
Sbjct 1474 AAGCTCGA-GCCTAACCGCGATGT-TATGGAAGAATGCTGCTTCATTGTTGAGGAGTCTT 1531
Query 1692 TCGACTCTATCTACAGAGAAGGACGAAA-AAATGATAAGATCATTGGACCACTTGAGATT 1750
| ||| || |||||||| ||| |||||| ||| ||||||| |||||||||||||||||||
Sbjct 1532 TGGACCCTCTCTACAGAAAAGAACGAAAGAAA-GATAAGAACATTGGACCACTTGAGATT 1590
Query 1751 AAGGTAGTTAAACCTGGCGCTTTTGATGAGCTCATGAATTTC-TTCTTGTCTCGAGGCTC 1809
||||| ||||| ||||||||||| || || |||||||| ||| ||| |||||||||||||
Sbjct 1591 AAGGTTGTTAAGCCTGGCGCTTTCGACGAACTCATGAACTTCTTTC-TGTCTCGAGGCTC 1649
Query 1810 TTCTGTGAGTCAGTACAAGACTCCAAGGTCAGTGACGCA-TGAAGAAGCC-TTGAATATA 1867
||||||||||||||||||||| | ||||| |||||| | |||||||||| || || |||
Sbjct 1650 TTCTGTGAGTCAGTACAAGACGCTGAGGTCGGTGACG-AGTGAAGAAGCCGTT-AAGATA 1707
Query 1868 TTGGAGTCGAACGTTGTTTCCGAGTTTCTTAGCCGGAAAACTCCGTCGTGGG 1919
|||||| | ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1708 TTGGAGGCCAACGTTGTTTCCGAGTTTCTTAGTCAGAAAACTCCGTCGTGGG 1759
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76485211960
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5