BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G14410.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value Ahg488280 jgi|Araly1|488280|fgenesh2_kg.6__1414__AT5G14410.1 769 0.0 > Ahg488280 jgi|Araly1|488280|fgenesh2_kg.6__1414__AT5G14410.1 Length=452 Score = 769 bits (416), Expect = 0.0 Identities = 440/452 (97%), Gaps = 0/452 (0%) Strand=Plus/Plus Query 32 TCTAATCCATTTTCCATGGATTCCTCTCCCAAAATCACTAATCTCCCTTACAAGAGGCTT 91 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCTAATCCATTTTCCATGGCTTCCTCTCCCAAAATCACTAATCTCCCTTACAAGAGGCTT 60 Query 92 TCTCTAGAAGATGATGTCTTCGGCGAAACAACAAGAAGAAGATCGTCATTCTATTCTTAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCTCTAGAAGATGATGTCTTCGGCGAAACAACAAGAAGAAGATCGTCATTCTATTCTTAC 120 Query 152 AGGTTCAAGCGAGTGGTGTCATTGGGAGGAAGGAGGAGGATTAGGGTTAGAGTTAAGATC 211 ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 121 AGGTTCAGGAGAGTGGTGTCACTGGGAGGAAGAAGGAGGATTAGGGTTAGAGTTAAGATC 180 Query 212 CGAAGACTTAGAGGATTTGTGAGGAAGAAAGCGAATAGGGTAAAAACTGGAATTTTAAAA 271 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 181 CGAAGACTTAGAGGATTTGTGAGGAAGAAAGCGAATAGGGTCAAAACTGGAATTATAAAA 240 Query 272 ATATTGAAGAGGTTGAAGGAGAGTCAATCACACTTTGGTGATCTCTTTGCCGGTAATTAC 331 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 241 ATATTGAAGAGGTTGAAGGAGAGTCAATCACACTTTGGTGATCTCTTTGCTGGTAATTAC 300 Query 332 CTTTTCATGCAAGTTAATCCTTCTTCTCTTAACGCTAAGTATGTCTTCGACAAATCTTTT 391 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 301 CTTTTCATGCAAGTTAATCCTTCTTCTCTTAACACTAAGTATGTCTTCGACAAATCTTTT 360 Query 392 CAAGGCCAAAATGGTAACTTCCCCTCTAGATTATCTCTTCCTAGAGTTCTTATGTAAAGA 451 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CAAAGCCAAAATGGTAACTTCCCCTCTAGATTATCTCTTCCTAGAGTTCTTATGTAAAGA 420 Query 452 CGGATAAACATTAACTATAGTTATGTTTCTGT 483 | |||||||| ||||||||||||||||||||| Sbjct 421 CTGATAAACAATAACTATAGTTATGTTTCTGT 452 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20604018060 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5