BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G15070.2
Length=3384
Score E
Sequences producing significant alignments: (Bits) Value
Ahg488348 jgi|Araly1|488348|fgenesh2_kg.6__1482__AT5G15070.1 4944 0.0
Ahg477396 jgi|Araly1|477396|fgenesh2_kg.3__97__AT3G01310.1 3129 0.0
> Ahg488348 jgi|Araly1|488348|fgenesh2_kg.6__1482__AT5G15070.1
Length=3444
Score = 4944 bits (2677), Expect = 0.0
Identities = 2849/2932 (97%), Gaps = 11/2932 (0%)
Strand=Plus/Plus
Query 1 CTATCTCTAGCTATTGCTCTCTCTGCTTGTGATCATCATTTTCCCCAACGGAGAACGAGA 60
||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 68 CTATCGCTAGCTATTGCTCTCTCTGCTTGTGATCATCGTTTTCCCCGACGGAGAACGAGA 127
Query 61 GAACGTCGTTCGAGGAACGAAACGGAAAGAGGTTCGTATCGG---GAGGAGAGAGCGAAA 117
|||||||||| | | || || | |||| || | ||| ||||||||||||| |
Sbjct 128 GAACGTCGTT-GTGTAA--AATC-----GAGGAACGAAACGGAAAGAGGAGAGAGCGAGA 179
Query 118 ATGGGGGTGGAAGAAGGAGCTGGTGTTGATAAGAAGATAACGATTGGAGTCTGCGTCATG 177
|||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 180 ATGGGGTTGGAAGAAGGAGCAGGTGTTGATAAGAAGATAAAGATTGGAGTCTGCGTCATG 239
Query 178 GAAAAGAAGGTTTTTTCAGCTCCCATGGGACAAATTATGGACAGGATACATGCGTTTGGC 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 240 GAAAAGAAGGTTTTCTCAGCTCCCATGGGACAAATTATGGACAGGATACACGCCTTTGGC 299
Query 238 GAATTTGAGATTATACATTTTGGGGACAAGGTCATACTTGAAGACCCAGTAGAAAGTTGG 297
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 300 GAATTTGAGATTATACATTTTGGGGATAAGGTCATACTTGAAGACCCAGTAGAAAGTTGG 359
Query 298 CCGATTTGTGATTGTTTGATTGCTTTCTATTCCTCTGGATATCCTCTTGAGAAAGTTCAA 357
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CCGATCTGTGATTGTTTGATTGCTTTCTATTCCTCTGGATATCCTCTTGAGAAAGTTCAA 419
Query 358 GCATATTCTTCTTTAAGAAAGCCCTTTTTAGTGAATGAACTCGATCCCCAATATCTTCTT 417
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 420 GCATATTCTTCTTTAAGAAAGCCCTTTTTAGTGAATGAACTGGATCCTCAATATCTTCTT 479
Query 418 CATGACCGCCGGAAAGTGTATGAGCATCTTGAGATGTATGGTATCCCAGTTCCTAGATAT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CATGACCGCCGGAAAGTGTATGAGCATCTTGAGATGTATGGTATCCCAGTTCCTAGATAT 539
Query 478 GCTTGTGTCAATAGAAAAGTACCAGACGAAGATCTTGATTATTTCGTCGAGGAAGAAGAT 537
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GCCTGTGTCAATAGAAAAGTACCAGACGAAGATCTTGATTATTTCGTCGAGGAAGAAGAT 599
Query 538 TTTGTTGAGGTTAAAGGTGAACGATTCTGGAAGCCATTTGTGGAAAAGCCCGTCAATGGA 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TTTGTTGAGGTTAAAGGTGAACGATTCTGGAAGCCATTTGTGGAAAAGCCCGTCAATGGA 659
Query 598 GATGACCATAGTATAATGATATACTACCCTAGCTCAGCTGGTGGAGGCATGAAAGAATTG 657
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 660 GATGACCATAGTATCATGATATACTACCCTAGCTCAGCAGGTGGAGGCATGAAAGAATTG 719
Query 658 TTTCGTAAGGTTGGGAATCGATCAAGTGAGTTTCATCCTGATGTCAGAAGAGTAAGGAGA 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TTTCGTAAGGTTGGGAATCGATCAAGTGAGTTTCATCCTGATGTCAGAAGAGTAAGGAGG 779
Query 718 GAAGGTTCTTATATATATGAGGAGTTTATGCCTACTGGGGGAACTGATGTCAAGGTCTAC 777
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 780 GAAGGTTCTTATATATACGAGGAGTTTATGCCTACTGGAGGAACTGATGTCAAGGTCTAC 839
Query 778 ACTGTGGGTCCCGAATATGCACACGCTGAAGCAAGAAAATCACCTGTTGTTGATGGTGTA 837
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 840 ACTGTGGGTCCCGAATATGCACACGCTGAAGCAAGAAAATCACCGGTTGTTGATGGTGTA 899
Query 838 GTAATGAGAAATCCAGATGGGAAGGAAGTGAGATATCCAGTTTTACTTACACCTGCTGAG 897
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTAATGAGGAATCCAGATGGGAAGGAAGTGAGATATCCAGTTTTACTTACACCTGCTGAG 959
Query 898 AAACAAATGGCGAGAGAAGTTTGCATTGCATTTAGGCAAGCGGTTTGCGGTTTTGATCTC 957
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 960 AAGCAAATGGCGAGAGAAGTTTGCATTGCATTTAGGCAAGCGGTCTGCGGTTTTGATCTC 1019
Query 958 CTACGATCTGAGGGAAGTTCATATGTTTGTGACGTAAATGGATGGAGTTTTGTGAAGAAC 1017
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1020 CTACGATCTGAGGGAAGTTCATATGTTTGTGACGTAAATGGATGGAGCTTTGTGAAGAAC 1079
Query 1018 TCCTATAAGTATTACGACGATGCTGCTTGTGTGCTACGGAAAATGTTTTTGGATGCAAAG 1077
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1080 TCCTATAAGTATTACGACGATGCAGCTTGTGTGCTACGGAAAATGTTTTTGGATGCAAAG 1139
Query 1078 GCTCCTCATCTTTCTTCAACAATTCCTCCCATTCTGCCATGGAAAATCAACGAACCTGTC 1137
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1140 GCTCCTCATCTGTCTTCAACAATTCCTCCCATTCTCCCATGGAAAATCAACGAACCTGTC 1199
Query 1138 CAATCTAATGAAGGTCTTACCCGCCAAGGAAGTGGCATCATCGGAACTTTTGGGCAGTCA 1197
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1200 CAATCTAATGAAGGTCTTACTCGCCAAGGAAGTGGCATCATTGGAACTTTTGGGCAGTCA 1259
Query 1198 GAGGAGCTACGCTGTGTCATTGCTATTGTTCGGCATGGTGATAGAACCCCCAAGCAGAAA 1257
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1260 GAGGAGCTACGCTGTGTCATTGCTGTTGTTCGGCATGGTGATAGAACCCCCAAGCAGAAA 1319
Query 1258 GTGAAACTAAAAGTTACAGAGGAGAAACTGTTAAACCTGATGTTGAAGTACAATGGAGGA 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 GTGAAACTAAAAGTTACAGAGGAGAAACTGTTAAACCTGATGTTGAAGTACAATGGAGGA 1379
Query 1318 AAACCAAGAGCTGAGACAAAACTTAAAACTGCCGTCCAATTGCAAGATCTATTGGATGCC 1377
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1380 AAACCAAGAGCTGAGACAAAACTTAAAAGTGCCGTCCAATTGCAAGATCTATTGGATGCC 1439
Query 1378 ACAAGAATGTTAATTCCTCGTGCAAGATCAGGTGAAAGTGATAGTGATGCAGAAGACCTT 1437
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1440 ACAAGAATGTTAGTTCCTCGTACAAGATCAGGTGAAAGTGATAGTGATGCAGAAGACCTT 1499
Query 1438 GAACACGCTGACAAGCTTCGGCAAGTTAAAGCCGTTCTTGAAGAGGGTGGGCATTTCTCT 1497
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1500 GAACACGCTGACAAGCTTCGGCAAGTTAAAGCCGTTCTTGAAGAGGGTGGACATTTCTCT 1559
Query 1498 GGCATATACAGGAAGGTTCAACTGAAGCCGTTGAAATGGGTTAACGTACCAAAAAGTGAT 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 GGCATATACAGGAAGGTTCAACTGAAGCCGTTGAAATGGGTTAACGTACCAAAAAGTGAT 1619
Query 1558 GGTGAAGGCGAAGAGGAACGCCCAGTGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTT 1617
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 GGTGAAGGTGAAGAGGAACGCCCAGTGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTT 1679
Query 1618 CTAACTCATGCTGGTAGAAAGCAGGCCGAAGAGCTTGGTAGATACTTTCGAAACAATATG 1677
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1680 CTAACTCATGCTGGTAGAAAACAGGCCGAAGAACTTGGTAGATACTTTCGAAACAATATG 1739
Query 1678 TATCCAGGGGAAGGTACCGGTTTGCTCCGTCTCCATAGTACATACCGTCACGACCTTAAA 1737
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1740 TATCCAGGGGAAGGTACCGGTTTGCTCCGTCTCCATAGCACATACCGTCACGACCTTAAA 1799
Query 1738 ATTTACAGCTCTGACGAGGGACGTGTTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTG 1797
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1800 ATTTACAGCTCTGACGAGGGGCGTGTTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTG 1859
Query 1798 CTTGACCTAGAAGGACAGCTGACCCCAATCCTGGTTTCTCTGGTAAGTAAGGACTCTTCC 1857
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1860 CTTGACCTAGAAGGACAGCTGACCCCAATCCTGGTTTCTCTGGTCAGTAAGGACTCTTCC 1919
Query 1858 ATGTTGGATGGCCTTGATAATGCCAGCAGTGAAATGGAAGCAGCTAAGGCTCAACTGAAT 1917
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1920 ATGTTGGATGGCCTTGATAATGCTAGCAGTGAAATGGAAGCAGCTAAGGCTCAACTGAAT 1979
Query 1918 GAGATCATAACCGCCGGCTCAAAGATGGTACATGATCACGTCTCTTCTGAATTACCTTGG 1977
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1980 GAGATCATAACCGCCGGCTCAAAGATGGTAGATGATTACGTCTCTTCTGAATTACCTTGG 2039
Query 1978 ATGACTGATGGGGCTGGACTTCCTCCTCACGCTGATGAGCACCTACCTGAATTGGTAAAA 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 ATGACTGATGGGGCTGGACTTCCTCCTCACGCTGATGAGCACCTACCTGAATTGGTAAAA 2099
Query 2038 TTAGCTAAAAAGGTGACTGAACAAGTAAGGCTACTTGCACAAGATGAACACGAGAATCTC 2097
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2100 TTAGCTAAAAAGGTGACTGAACAAGTGAGGCTACTTGCACAAGATGAACACGAGAATCTC 2159
Query 2098 GCTGAGCCTAGCGCTTATGATGTAGTCCCTCCATATGATCAAGCCAAGGCCCTTGGCAAG 2157
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2160 GCTGAGCCTAGCGCTTATGATGTAGTCCCTCCATATGATCAAGCTAAGGCCCTTGGCAAG 2219
Query 2158 TCAAACATTGACGTTGGTCGGATTGCTGCCGGATTACCTTGTGGTAGTGAAGGGTTCCTT 2217
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2220 TCAAACATTGACGTTGGTCGGATTGCTGCTGGATTACCTTGTGGTAGTGAAGGGTTCCTT 2279
Query 2218 TTGATGTTTGCCCGGTGGAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGAGCGG 2277
||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2280 TTGATGTTTGCTCGATGGAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGACCGG 2339
Query 2278 TTTGACATTACGCAGATTCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAAT 2337
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 TTTGACATAACGCAGATTCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAAT 2399
Query 2338 TCTCATCTCGATCTAAAAGGACTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGAT 2397
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2400 TCTCATCTCGATCTAAAAGGATTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGAT 2459
Query 2398 GGTGTAATCCCAAATGAGTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAG 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 GGTGTAATCCCAAATGAGTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAG 2519
Query 2458 ATTGCACGGCGCCTGCTGGGTAAAATCCTTATTGACTTGAGGAACACTCGAGAAGAGGCC 2517
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 2520 ATTGCACGGCGCCTGCTGGGTAAGATCCTGATTGACTTGAGGAACACTCGAGAAGAGGCC 2579
Query 2518 ATGAGTGTTGCTGAATTGAAGAACAGTCAAGATCAAGTCTCAGTGTCATTGTATTCGTCA 2577
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2580 ATGAGTGTTGCTGAATTGAAGAACAGTCAAGATCAAGTTTCAGTGTCATTGTATTCGTCA 2639
Query 2578 AGAAAGGAGGATAGATATAGTCAACCAAAACTTTTCGTTAAAAGCGATGAGTTGAGACGG 2637
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 AGAAAGGAGGATAGATACAGTCAACCAAAACTTTTCGTTAAAAGCGATGAGTTGAGACGG 2699
Query 2638 CCTAGCACTGGAGAGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACAGACTAGAT 2697
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 2700 CCTAGCACTGGAGAGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACCGACTCGAT 2759
Query 2698 CCAAAGTATGCAAATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTCACA 2757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2760 CCAAAGTATGCAAATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTTACA 2819
Query 2758 TCTGAATCACATATTCACTCTCTGATGAACGTTCTACGGTATTGTAATCTTGACGAATCT 2817
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2820 TCTGAATCACATATTCATTCTCTGATGAACGTTCTACGGTATTGTAACCTTGACGAATCT 2879
Query 2818 CTTCAAGGAGAAGAAAGTCTGGTCTGCCAAAGCGCGTTGGATCGTCTATGTAAAACCAAA 2877
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2880 CTTCAAGGAGAAGAAAGTCTGGTCTGCCAAAGCGCATTGGATCGTCTATGTAAAACCAAA 2939
Query 2878 GAACTTGATTACATGAGCTACGTTGTCCTAAGGCTGTTTGAGAACACTGAGA 2929
||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2940 GAACTCGATTACATGAGCTATGTTGTCCTAAGACTGTTTGAGAACACTGAGA 2991
Score = 630 bits (341), Expect = 2e-179
Identities = 403/432 (93%), Gaps = 8/432 (2%)
Strand=Plus/Plus
Query 2953 CTGCAGATATCTCTGGACGACCCGAAACGATTTAGAATCGAACTTACATTTAGCCGTGGC 3012
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2986 CTG-AGATATCTCTGGACGACCCGAAACGATTCAGAATCGAACTTACATTTAGCCGTGGC 3044
Query 3013 GCAGATTTGTCTCCCTTAGAGAAGAAGGACGAGGAAGCAGAATCATTGCTTCGAGAACAC 3072
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3045 GCAGATTTATCTCCCTTAGAGAAGAAGGACGAGGAAGCAGAATCATTGCTTCGGGAACAC 3104
Query 3073 ACACTTCCGATAATGGGACCAGAAAGGCTTCAAGAGGTTGGTTCATGTTTGACCCTCGAG 3132
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 3105 ACACTTCCGATAATGGGACCAGAGAGGCTTCAAGAGGTTGGTTCATGTTTGACTCTCGAG 3164
Query 3133 ACAATGGAGAAGATGATACGTCCATTTGCAATGCCAGCCGAGGATTTCCCTCCACCGTGT 3192
|||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct 3165 ACAATGGAGAAGATGATACGGCCATTTGCAATGCCGGCAGAGGATTTCCCTCCGCCGTCA 3224
Query 3193 ACTCCAGCAGGCTTCTCCGGTTACTTCTCTAAAAGCGCCGCTGTTCTCGAACGTCTTGTT 3252
||||| |||||||||||||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct 3225 ACTCCGGCAGGCTTCTCCGGATACTTCTCCAAAAGCGCCGCCGTTCTGGAGCGTCTTGTA 3284
Query 3253 AAACTTTGGCCCTTCCACAAGAACACCTCTAATGGCAAAAGCTAAACGCCAACAAAGTGG 3312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3285 AAACTTTGGCCCTTCCACAAGAACACCTCTAATGGCAAAAGCTAAACGCCAACAAAGTGG 3344
Query 3313 GTGACTAATGACTAATGAATGATGATGATATTCCTAATCCATTTATTTTTTGAATCAAAA 3372
| | ||||||||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct 3345 ---A-T---GACTAATGAATGATGATGATATTCCTAATTCATTTAATTTTTGAAACAAAA 3397
Query 3373 TTTTGAATTGTT 3384
||||||||||||
Sbjct 3398 TTTTGAATTGTT 3409
> Ahg477396 jgi|Araly1|477396|fgenesh2_kg.3__97__AT3G01310.1
Length=3368
Score = 3129 bits (1694), Expect = 0.0
Identities = 2483/2858 (87%), Gaps = 77/2858 (3%)
Strand=Plus/Plus
Query 117 AATGGGGGTGGAAGAAGGAGC---TGGTGTTGATAAGAAGATAACGATTGGAGTCTGCGT 173
||||| | |||| |||||||| || ||||| | ||||||||| |||||||||||||||
Sbjct 96 AATGGAGATGGACGAAGGAGCAAGTGTTGTTGGTGAGAAGATAAAGATTGGAGTCTGCGT 155
Query 174 CATGGAAAAGAA-G-G---T-----T------T-TT-TCAGCTCCCATGGGACAAATTAT 215
|||||||||||| | | | | | || |||||||||||||| ||||| |
Sbjct 156 CATGGAAAAGAAGGTGAAATGCGGCTCCGAGGTATTCTCAGCTCCCATGGGGGAAATTCT 215
Query 216 GGACAGGA-TAC-ATG-CGTTTGGCGAATTTGAGAT-TATACATTTTGGGGACAAGGTCA 271
|||| || | | | | | ||||| ||||||||||| | | ||||||||||| || || |
Sbjct 216 CGACA-GACT-CGA-GTCTTTTGGTGAATTTGAGATCT-TGCATTTTGGGGATAAAGTTA 271
Query 272 TACTTGAAGACCCAGTAGAAAGTTGGCCGATTTGTGATTGTTTGATTGC-TTTCTATTCC 330
|||||||||| ||| ||||||||||||| ||||||||||| |||||||| |||| |||||
Sbjct 272 TACTTGAAGATCCAATAGAAAGTTGGCCCATTTGTGATTGCTTGATTGCTTTTC-ATTCC 330
Query 331 TCTGGATATCCTCTTGAGAAAGTTCAAGCATATTCTTCTTTAAGAAAGCCCTTTTTAGTG 390
|||||||||||||||||||| | ||| |||||| || ||||||||||||| |||||||||
Sbjct 331 TCTGGATATCCTCTTGAGAAGGCTCAGGCATATGCTGCTTTAAGAAAGCCATTTTTAGTG 390
Query 391 AATGAACTCGATCCCCAATATCTTCTTCATGACCGCCGGAAAGTGTATGAGCATCTTGAG 450
|||||||| ||||| || |||||||||||||| |||||||| ||||||||||||||||||
Sbjct 391 AATGAACTAGATCCGCAGTATCTTCTTCATGATCGCCGGAAGGTGTATGAGCATCTTGAG 450
Query 451 ATGTATGGTATCCCAGTTCCTAGATATGCTTGTGTCAATAGAAAAGTACCAGA-CGAAGA 509
|||||||| |||||||||||||| |||||||||||||||||||| |||||| | | ||||
Sbjct 451 ATGTATGGCATCCCAGTTCCTAGGTATGCTTGTGTCAATAGAAAGGTACCAAATC-AAGA 509
Query 510 TCTTGATTATTTCGTCGAGGAAGAAGATTTTGTTGAGGTTAAAGGTGAACGATTCTGGAA 569
||| ||||||| |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 510 CCTTAATTATTTTGTCGAGGAAGAAGATTTTGTTGAGGTCAATGGTGAACGCTTCTGGAA 569
Query 570 GCCATTTGTGGAAAAGCCCGTCAATGGAGATGACCATAGTATAATGATATACTACCCTAG 629
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 570 GCCATTTGTGGAAAAGCCTGTCAATGGAGATGACCATAGTATAATGATATACTACCCTAG 629
Query 630 CTCAGCTGGTGGAGGCATGAAAGAATTGTTTCGTAAGGTTGGGAATCGATCAAGTGAGTT 689
||| || |||||||||||||||||||||||||| ||| ||||||| || |||||||| ||
Sbjct 630 CTCGGCAGGTGGAGGCATGAAAGAATTGTTTCGCAAGATTGGGAACCGTTCAAGTGAATT 689
Query 690 TCATCCTGATGTCAGAAGAGTAAGGAGAGAAGGTTCTTATATATATGAGGAGTTTAT-GC 748
||||||||| |||||| | || ||||||||||| ||||||||||| ||||||||||| ||
Sbjct 690 TCATCCTGACGTCAGACGGGTTAGGAGAGAAGGCTCTTATATATACGAGGAGTTTATGGC 749
Query 749 CTACTGGGGGAACTGATGTCAAGGTCTACACTGTGGGTCCCGAATATGCACACGCTGAAG 808
| || || ||||||||||||||||||||||| |||||||| ||||| ||||| || ||||
Sbjct 750 C-ACCGGAGGAACTGATGTCAAGGTCTACACAGTGGGTCCTGAATACGCACATGCGGAAG 808
Query 809 CAAGAAAATCACCTGTTGTTGATGGTGTAGTAATGAGAAATCCAGATGGGAAGGAAGTGA 868
| ||||| || ||||||||||||||||| || ||||| ||| ||||||||||||| ||||
Sbjct 809 CCAGAAAGTCGCCTGTTGTTGATGGTGTTGTTATGAGGAATACAGATGGGAAGGAGGTGA 868
Query 869 GATATCCAGTTTTACTTACACCTGCTGAGAAA-CAAATGGCGAGAGAAGTTTGCATTGCA 927
|||||||||| || |||||||| ||||| ||| |||||||| |||||||||||||| |||
Sbjct 869 GATATCCAGTATTGCTTACACCAGCTGA-AAAGCAAATGGCTAGAGAAGTTTGCATCGCA 927
Query 928 TTTAGGCAAGCGGTTTGCGGTTTTGATCTCCTACGATCTGAGGGAAGTTCATATGTTTGT 987
||||||||||||||||| || |||||||| ||||||||||| || |||||||||| |||
Sbjct 928 TTTAGGCAAGCGGTTTGTGGGTTTGATCTTCTACGATCTGAAGGCTGTTCATATGTGTGT 987
Query 988 GACGTAAATGGATGGAGTTTTGTGAAGAACTCCTATAAGTATTACGACGATGCTGCTTGT 1047
|| || |||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct 988 GATGTCAATGGATGGAGTTTTGTGAAGAACTCATACAAGTATTACGACGATGCTGCGTGT 1047
Query 1048 GTGCTACGGAAAATGTTTTTGGATGCAAAGGCTCCTCATCTTTCTTCAACAATTCCTCCC 1107
|||||| |||| |||| ||||||||||||||||||||||||||| || || |||||||
Sbjct 1048 GTGCTAAGGAAGATGTGTTTGGATGCAAAGGCTCCTCATCTTTCATCGACTCTTCCTCCT 1107
Query 1108 ATTC-TGCCATGGAAAATCAACGAAC-CTGTCCAATCTAATGAAGGTCTTACCCGCCAAG 1165
| | |||||||||| ||||||||| | || ||| |||||||||| || || ||||| |
Sbjct 1108 A-CCTTGCCATGGAAGGTCAACGAACGC-GTACAACCTAATGAAGGACTAACTCGCCAGG 1165
Query 1166 GAAGTGGCATCATCGGAACTTTTGGGCAGTCAGAGGAGCTACGCTGTGTCATTGCTATTG 1225
| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||
Sbjct 1166 GTAGTGGCATCATCGGCACTTTTGGGCAGTCAGAAGAGCTACGTTGTGTCATTGCTGTTA 1225
Query 1226 TTCGGCATGGTGATAGAACCCCCAAGCAGAAAGTGAAACTAAAAGTTACAGAGGAGAAAC 1285
|||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1226 TTCGACATGGCGATAGAACTCCCAAACAGAAAGTGAAACTAAAAGTTACAGAGGAAAAAC 1285
Query 1286 TGTTAAACCTGATGTTGAAGTACAATGGAGGAAAACCAAGAGCTGAGACAAAACTTAAAA 1345
| |||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| |
Sbjct 1286 TATTAAACCTAATGTTGAAGTACAATGGTGGAAAGCCAAGAGCTGAGACCAAACTTAAGA 1345
Query 1346 CTGCCGTCCAATTGCAAGATCTATTGGATGCCACAAGAATGTTAATTCCTCGTGCAAGAT 1405
||||||||| |||||||||||||| ||||||||||||||| || |||| ||| |||||
Sbjct 1346 GTGCCGTCCAGTTGCAAGATCTATTAGATGCCACAAGAATGCTAGTTCCCCGTTCAAGAC 1405
Query 1406 CA-G--GTGAAAGTGATAGTGATGCAGAAGACCTTGAACACGCTGACAAGCTTCGGCAAG 1462
|| | |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 1406 CAGGTCGTGAAAGTGATAGTGATGCAGAAGACCTTGAACATGCTGAGAAGCTTCGCCAAG 1465
Query 1463 TTAAAGCCGTTCTTGAAGAGGGTGGGCATTTCTCTGGCATATACAGGAAGGTTCAACTGA 1522
| ||||| |||||||||||||| || ||||||||||| ||||||||||||||||||||||
Sbjct 1466 TGAAAGCAGTTCTTGAAGAGGGAGGACATTTCTCTGGTATATACAGGAAGGTTCAACTGA 1525
Query 1523 AGCCGTTGAAATGGGTTAACGTACCAAAAAGTGATGGTGAAGGCGAAGAGGAACGCCCAG 1582
||||| |||| |||||||| |||||||| | ||||||||||||||||| ||| | ||||
Sbjct 1526 AGCCGCTGAAGTGGGTTAAAATACCAAAAGGCGATGGTGAAGGCGAAGAAGAAAGACCAG 1585
Query 1583 TGGAAGCTCTTATGGTTCTGAAATACGGGGGTGTTCTAACTCATGCTGGTAGAAAGCAGG 1642
| ||||| ||||||||| ||||||| ||||||||| |||| || ||||||||||||||||
Sbjct 1586 TAGAAGCCCTTATGGTTTTGAAATATGGGGGTGTTTTAACACACGCTGGTAGAAAGCAGG 1645
Query 1643 CCGAAGAGCTTGGTAGATACTTTCGAAACAATATGTATCCAGGGGAAGGTACCGGTTTGC 1702
| ||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 1646 CAGAAGAACTTGGTAGATACTTTCGAAACAATATGTATCCAGGTGAAGGGACTGGTTTGC 1705
Query 1703 TCCGTCTCCATAGTACATACCGTCACGACCTTAAAATTTACAGCTCTGACGAGGGACGTG 1762
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1706 TTCGTCTCCATAGTACATACCGTCATGACCTTAAAATTTACAGCTCTGACGAGGGACGTG 1765
Query 1763 TTCAGATGTCTGCAGCTGCTTTTGCCAAAGGCCTGCTTGACCTAGAAGGACAGCTGACCC 1822
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1766 TTCAGATGTCTGCAGCGGCTTTTGCTAAAGGCCTGCTTGACCTAGAAGGACAGCTGACGC 1825
Query 1823 CAATCCTGGTTTCTCTGGTAAGTAAGGACTCTTCCATGTTGGATGGCCTTGATAATGCCA 1882
|||||||||||||| |||| || ||||||||||||||| ||||||| |||||||||||||
Sbjct 1826 CAATCCTGGTTTCTTTGGTTAGCAAGGACTCTTCCATGCTGGATGGTCTTGATAATGCCA 1885
Query 1883 GCAGTGAAATGGAAGCAGCTAAGGCTCA-ACTGAATGAGATCATAACCGCC-GGCTCAAA 1940
||| |||||||||||| || |||||| | | |||| ||||| |||| | | ||| ||||
Sbjct 1886 GCATTGAAATGGAAGCGGCCAAGGCT-AGATTGAACGAGATTGTAAC-GTCTGGCACAAA 1943
Query 1941 GATGGTACATGATCACGTCTCTTCTGAA--TTACC-TTGGATGACTGATGGGGCTGGACT 1997
|||| || | || || | ||| |||||| || || |||||||||||| || ||||||||
Sbjct 1944 GATGATAGACGACCATGACTCCTCTGAAGATTTCCCTTGGATGACTGACGGAGCTGGACT 2003
Query 1998 TCCTCCTCA-CGCTGATGAGCACCTACCTGAATTGGTAAAATTAGCTAAAAAGGTGACTG 2056
|||||| || |||| | || | ||||| ||||||||| |||||| |||| || |||||||
Sbjct 2004 TCCTCC-CAACGCTCAAGAACTCCTACGTGAATTGGTGAAATTAACTAAGAATGTGACTG 2062
Query 2057 AACAAGTAAGGCTACTTGCACAAG-ATGAACACGAGAATCTCGCTGAGCCTAGCGCTTAT 2115
|||||||||| ||||||||| | | ||||| ||||||| ||| ||||||| | | ||
Sbjct 2063 AACAAGTAAGACTACTTGCA-ATGGATGAAGACGAGAACCTCACTGAGCC-A----T-AT 2115
Query 2116 GATGTAGTCCCTCCATATGATCAAGCCAAGGCCCTTGGCAAGTCAAACATTGAC-GTTGG 2174
||| || | ||||||||||||||||| ||||||||||||||| ||||||||||| || |
Sbjct 2116 GATATAATACCTCCATATGATCAAGCAAAGGCCCTTGGCAAGACAAACATTGACAGT-GA 2174
Query 2175 TCGGATTGCTGCCGGATTACCTTGTGGTAGTGAAGGGTTCCTTTTGATGTTTGCCCGGTG 2234
|||||||||| | |||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 2175 TCGGATTGCTTCTGGATTACCATGTGGTAGCGAAGGGTTCCTTTTGATGTTTGCTCGGTG 2234
Query 2235 GAGAAAACTCGAAAGGGATCTCTACAACGAAAGAAGAGAGCGGTTTGACATTACGCAGAT 2294
|| ||||||| ||||||||||||||| ||||||| ||| ||||||||||| || |||||
Sbjct 2235 GATTAAACTCGCAAGGGATCTCTACAATGAAAGAAAAGACCGGTTTGACATCACACAGAT 2294
Query 2295 TCCTGATGTTTACGATTCATGCAAGTATGACCTGTTACATAATTCTCATCTCGATCTAAA 2354
|| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2295 CCCGGATGTTTACGATTCATGCAAGTACGACCTGTTACATAATTCCCATCTCGATCTAAA 2354
Query 2355 AGGACTAGACGAACTCTTCAAAGTAGCGCAGTTGCTTGCAGATGGTGTAATCCCAAATGA 2414
|||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2355 AGGATTAGATGAACTCTTCAAAGTAGCACAGTTACTTGCAGATGGTGTAATCCCAAATGA 2414
Query 2415 GTATGGGATCAATCCACAGCAAAAGCTCAAAATCGGTTCAAAGATTGCACGGCGCCTGCT 2474
|||||| |||||||| ||||||||||| || ||||||||||||||||| |||||| | |
Sbjct 2415 GTATGGCATCAATCCGCAGCAAAAGCTTAATATCGGTTCAAAGATTGCTCGGCGCTTAAT 2474
Query 2475 GGGTAAAATCCTT-ATTGACTTGAGGAACACTCGAGAAGAGGCCATGAGTGTTGCTGAAT 2533
||| |||||| || || ||||||||||| ||||||||||| ||| |||| |||||||| |
Sbjct 2475 GGGGAAAATC-TTGATAGACTTGAGGAATACTCGAGAAGAAGCCCTGAGCGTTGCTGAGT 2533
Query 2534 TGAA-GAACAGTCAAGATCAAGTCTCAGT-GTCAT-TGTATTCGTCAAGAAAGGAGGATA 2590
|||| ||| || ||||| ||||||| || || || || | || ||| || ||| ||||
Sbjct 2534 TGAAAGAA-AGCCAAGAACAAGTCTT-GTCGTTATCTGCCT-CG-CAA-AA-GGAAGATA 2587
Query 2591 GATATAGTCAACCAAAACTTTTCGTTAAAAGCGATGAGTTGAGACGGCCTAGCACTGGAG 2650
|| ||||||||||||| ||||| | || |||||||| |||||||| ||| |||| || |
Sbjct 2588 GAAATAGTCAACCAAAGCTTTTTATCAATAGCGATGAATTGAGACGACCTGGCACAGGTG 2647
Query 2651 AGAATAAAGAAGAAGATGATGATAAAGAAACCAAATACAGACTAGATCCAAAGTATGCAA 2710
| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2648 A---TAAAGATGAAGATGATGATAAAGAAACCAAATACCGATTAGATCCAAAGTATGCAA 2704
Query 2711 ATGTCATGACGCCTGAACGTCATGTGAGGACACGTCTTTACTTCACATCTGAATCACATA 2770
|||| | ||| |||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct 2705 ATGTGAAGACACCTGAACGTCATGTGAGGACTCGACTTTACTTCACATCTGAATCGCATA 2764
Query 2771 TTCACTCTCTGATGAACGTTCTACGGTATTGTAATCTTGACGAATCTCTTCAAGGAGAAG 2830
|||| || || |||||||| || ||||| ||||| ||||| ||||| || | ||||||||
Sbjct 2765 TTCATTCGCTCATGAACGTCCTTCGGTACTGTAACCTTGATGAATCACTCCTAGGAGAAG 2824
Query 2831 AAAGTCTGGTCTGCCAAAGCGCGTTGGATCGTCTATGTAAAACCAAAGAACTTGATTACA 2890
|||| || | ||||||| ||| || || ||||| ||||||||||| ||||| |||||||
Sbjct 2825 AAAGCCTCATTTGCCAAAACGCCTTAGAACGTCTGTGTAAAACCAAGGAACTCGATTACA 2884
Query 2891 TGAGCTACGTTGTCCTAAGGCTGTTTGAGAACACTGAG 2928
|||| ||| ||||||||||||| || |||||||| |||
Sbjct 2885 TGAGTTACATTGTCCTAAGGCTCTTCGAGAACACCGAG 2922
Score = 268 bits (145), Expect = 1e-70
Identities = 248/298 (83%), Gaps = 6/298 (2%)
Strand=Plus/Plus
Query 2960 TATCTCTGGACGACCCGAAACGATTTAGAATCGAACTTACATTTAGCCGTGGCGCAGATT 3019
|||| || || ||||||||| |||| | || |||||||||||||||||||| || ||||
Sbjct 2924 TATCACTTGAAGACCCGAAAAGATTCCGCATTGAACTTACATTTAGCCGTGGAGCTGATT 2983
Query 3020 TGTCTCCCTTAGAGAAGAAGGACGAGGAAGCAGA-ATCATTGCTTCGAGAACACACACTT 3078
|||||||||||| ||| || ||||| || ||||| | ||||||| | ||||||||||||
Sbjct 2984 TGTCTCCCTTAGGGAATAATGACGACGAGGCAGAGA-CATTGCTAAGGGAACACACACTT 3042
Query 3079 CCGATAATGGGACCAGAAAGGCTTCAAGAGGTTGGTTCATGTTTGACCCTCGAGACAATG 3138
||||||||||||||||| ||||||||||| |||||||| ||||| ||| ||||||| |||
Sbjct 3043 CCGATAATGGGACCAGAGAGGCTTCAAGAAGTTGGTTCTTGTTTAACCTTCGAGACTATG 3102
Query 3139 GAGAAGATGATACGTCCATTTGCAATGCCAGCCG-AGGATTTCCCTCCA-CCGTGTACTC 3196
||||| ||| | ||||| ||||| ||||| |||| | || |||||||| || | ||||
Sbjct 3103 GAGAAAATGGTTCGTCCTTTTGCTATGCC-GCCGGAAGACTTCCCTCCGGCC-TCCACTC 3160
Query 3197 CAGCAGGCTTCTCCGGTTACTTCTCTAAAAGCGCCGCTGTTCTCGAACGTCTTGTTAA 3254
| | |||||||||||||||||||| ||||| ||||| || ||||| || || |||||
Sbjct 3161 CGGTTGGCTTCTCCGGTTACTTCTCAAAAAGTGCCGCCGTGCTCGAGCGACTCGTTAA 3218
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127759272561
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5