BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G19330.1 Length=2491 Score E Sequences producing significant alignments: (Bits) Value Ahg488817 jgi|Araly1|488817|fgenesh2_kg.6__1951__AT5G19330.1 3792 0.0 Ahg317462 jgi|Araly1|317462|fgenesh1_pm.C_scaffold_3000478 1626 0.0 > Ahg488817 jgi|Araly1|488817|fgenesh2_kg.6__1951__AT5G19330.1 Length=2331 Score = 3792 bits (2053), Expect = 0.0 Identities = 2259/2355 (96%), Gaps = 27/2355 (1%) Strand=Plus/Plus Query 1 cttcttcttcttctctgatctctcctcttcttcGGATCGTCTTTTACTTTGTGAACGATG 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCTGCTTCTTCTCTGATCTCTCCTCTTCTTCGGATCGTCTTTTACTTTGTGAACGATG 60 Query 61 GACCAACAACCGGAGAGGCGAGAAGGCCGGAGTTTTCCGGAGCGTAAAGGACAGAAGCGG 120 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 61 GAGCAACAACCGGAGAGGCGAGAAGGCCGGAGTTTCCCGGAGCGTAAAGGACAGAAGCGA 120 Query 121 AAGCTAGAGGAAGGAGCCGCCGCCGTAGAAGATCGAGAGATCTCTGCCGTCAGCACCGAC 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| Sbjct 121 AAGCTAGAGGAAGGAGTAGCCGCCGTAGAAGATCGACAGATCTCTGCCGTCACCACCGAC 180 Query 181 GGAGGCCAAGCGCTTCTTAGCGAGGTTGCTGCTCAAGTCTCGGTACTAAACTCTGCCTTC 240 ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct 181 GGAGGCCAAGCGCTTCTCAGCGAGGTTGCTGCTCAAGTTTCGGTTCTAAACTCTGCCTTC 240 Query 241 TCTTGGCAAGAGTCCGATCGCGCTGCTGCCAAGCGAGCCACTCAAGTTCTGGCTGAGCTA 300 ||||||||||| || |||||||||||| | ||||| || |||||||| |||||||||||| Sbjct 241 TCTTGGCAAGAATCGGATCGCGCTGCTTCTAAGCGCGCAACTCAAGTCCTGGCTGAGCTA 300 Query 301 GCCAAAAACGAGGATTTAGTGAACGTGATTGTCGACGGAGGTGCTGTTCCAGCTCTTATG 360 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 301 GCTAAAAACGAGGATTTAGTTAACGTGATTGTCGACGGAGGTGCTGTTCCAGCTCTCATG 360 Query 361 ACGCATCTACAGGCGCCACCATACAACGACGGGGACTTGGCTGAGAAGCCGTACGAACAC 420 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 361 ACGCATCTACAGGCGCCGCCGTACAACGACGGGGACTTGGCTGAGAAGCCGTACGAACAC 420 Query 421 GAAGTTGAGAAGGGAAGCGCTTTTGCGCTTGGTCTTCTTGCTATTAAGCCAGAGTATCAG 480 || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 421 GAGGTTGAGAAGGGAAGCGCTTTTGCGCTTGGTCTTCTAGCAATTAAGCCAGAGTATCAG 480 Query 481 AAACTGATAGTAGACAAAGGTGCCTTACCTCATTTAGTGAATTTGTTGAAGAGAAACAAA 540 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 481 AAACTGATAGTAGACAAAGGTGCCTTACCTCATCTAGTGAATCTGTTGAAGAGAAACAAA 540 Query 541 GATGGTTCTAGCTCTCGAGCTGTGAATAGTGTTATCAGAAGAGCGGCTGATGCCATCACC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GATGGTTCTAGCTCTCGAGCTGTGAATAGTGTTATCAGAAGAGCGGCTGATGCCATCACC 600 Query 601 AATCTTGCTCATGAGAACAGCAGTATCAAGACCCGTGTTAGGGTAGAAGGCGGTATTCCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 601 AATCTTGCTCATGAGAACAGCAGTATCAAGACCCGTGTTAGGGTAGAAGGTGGCATTCCA 660 Query 661 CCTCTCGTGGAGTTGCTTGAATTTTCTGATTCAAAGGTCCAGAGAGCAGCAGCAGGGGCA 720 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 661 CCTCTCGTGGAGTTGCTTGAATTTTCTGATTCAAAGGTTCAGAGAGCAGCAGCAGGGGCA 720 Query 721 TTGAGAACCCTTGCATTTAAAAATGATGATAACAAGAATCAGATAGTTGAATGCAATGCT 780 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 721 CTGAGAACCCTTGCATTTAAAAATGATGATAACAAGAACCAGATAGTTGAATGCAATGCT 780 Query 781 CTTCCCACACTTATTCTAATGCTAGGATCAGAGGATGCTGCTATACATTATGAAGCGGTT 840 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 781 CTTCCCACTCTCATTCTAATGCTAGGATCAGAAGATGCTGCTATACATTATGAAGCGGTT 840 Query 841 GGAGTTATAGGCAATCTAGTACACTCGTCTCCACACATTAAAAAAGAGGTTCTTACTGCC 900 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 841 GGAGTTATTGGCAATCTAGTACACTCGTCTCCACACATTAAAAAAGAGGTTCTTGCTGCC 900 Query 901 GGGGCGTTGCAACCTGTCATTGGTCTTCTTAGCTCCTGTTGCCCTGAGAGTCAAAGAGAG 960 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 901 GGGGCGTTGCAACCTGTCATTGGTCTTCTTAGCTCCTGTTGCCCTGAGAGCCAAAGAGAG 960 Query 961 GCGGCTTTATTACTTGGGCAGTTTGCCTCAACTGATTCTGATTGTAAGGTGCACATTGTG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 GCGGCTTTATTACTTGGGCAGTTTGCCTCAACTGATTCTGATTGTAAGGTGCACATTGTG 1020 Query 1021 CAAAGGGGTGCTGTCCGTCCTTTAATTGAGATGCTTCAGTCCCCGGATGTCCAGTTGAAG 1080 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1021 CAAAGGGGTGCTGTCCGTCCTTTGATTGAGATGCTTCAGTCACCGGATGTCCAGTTGAAG 1080 Query 1081 GAAATGTCGGCCTTTGCACTGGGTAGATTGGCACAGGATGCCCACAATCAAGCTGGTATT 1140 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1081 GAAATGTCGGCCTTTGCACTGGGTAGATTGGCGCAGGATGCCCACAATCAAGCTGGTATT 1140 Query 1141 GCCCATAGTGGTGGTTTAGGACCTTTATTGAAGCTTCTCGATTCAAGAAATGGATCATTG 1200 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GCCCATAGTGGTGGCTTAGGACCTTTATTGAAGCTTCTCGATTCAAGAAATGGATCATTG 1200 Query 1201 CAACACAATGCTGCATTTGCTCTTTATGGCCTTGCCGATAATGAGGATAATGTGTCAGAT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1201 CAACACAATGCTGCATTTGCTCTTTATGGCCTTGCCGATAATGAGGATAATGTGTCGGAT 1260 Query 1261 TTTATCAGGGTGGGAGGTATCCAAAAGCTACAGGATGGAGAGTTTATTGTTCAAGCAACT 1320 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1261 TTTATCAGGGTGGGAGGTATCCAAAAGCTACAAGATGGAGAGTTTATTGTTCAAGCAACT 1320 Query 1321 AAAGATTGTGTTTCCAAAACACTAAAGAGATTGGAGGAGAAGATTCATGGAAGAGTTCTG 1380 ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1321 AAAGATTGTGTCTCCAAAACACTGAAGAGATTGGAGGAGAAAATTCATGGAAGAGTTCTG 1380 Query 1381 AGACATCTGTTGTACCTAATGCGCATTTCAGAGAAGTCTATCCAAAGACGAGTTGCTCTT 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 AGACATCTGTTGTACCTAATGCGCATTTCAGAGAAGTCTATCCAAAGACGAGTTGCTCTT 1440 Query 1441 GCCCTTGCTCATCTCTGTTCACCCGAGGATCA-ACGAACCATATTCATAGATGACAACGG 1499 || ||||||||||||||||||||||||||||| | |||||||||||||||||||||| || Sbjct 1441 GCTCTTGCTCATCTCTGTTCACCCGAGGATCAGA-GAACCATATTCATAGATGACAATGG 1499 Query 1500 GTTGGAGTTGCTACTCGGTCTTCTTGGTTCTTTAAACACTAAGCAGCAACTTGACGGTGC 1559 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1500 GTTGGAGTTGCTACTCGGTCTTCTTGGTTCTTTAAACACTAAGCAGCAACTTGATGGTGC 1559 Query 1560 AGCAGCGTTGTACAAATTAGCAAATAAATCTATGGCACTTTCTCCAGTTGATGCTGCTCC 1619 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1560 GGCAGCGTTGTACAAATTAGCAAGTAAATCTATGGCACTTTCTCCAGTTGATGCTGCTCC 1619 Query 1620 TCCTTCTCCAACACAAAGGGTTTATCTCGGAGAGCAATATGTAAATAATGCTACGCTGTC 1679 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1620 TCCTTCCCCAACACAAAGGGTTTATCTTGGAGAGCAATATGTAAATAATGCTACGCTGTC 1679 Query 1680 TGATGTAACCTTTCTAGTCGAAGGAAGGACATTCTATGCACACAGAATTTGTCTGCTGGC 1739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1680 TGATGTAACCTTTCTAGTCGAAGGAAGGACATTCTATGCACACAGAATTTGTCTGCTGGC 1739 Query 1740 ATCCTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTACAGAGAAAAAGACGCTAGAGA 1799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1740 ATCCTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTACAGAGAAAAAGACGCTAGAGA 1799 Query 1800 TATTGAGATTCCAAATATCAAATGGGAGGTGTTTGAGTTAATGATGAGGTTTATATACAC 1859 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1800 TATTGAGATTCCGAATATCAAATGGGAGGTGTTTGAGTTAATGATGAGGTTTATATACAC 1859 Query 1860 TGGATCTGTCGACATAACAAATGAGATATCAAAAGATCTTCTAAGAGCAGCGGATCAGTA 1919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 TGGATCTGTCGACATAACAAATGAGATATCAAAAGATCTTCTAAGAGCAGCGGATCAGTA 1919 Query 1920 TCTCTTGGAGGGCCTGAAACGACTCTGTGAATACACAATTGCTCAGGATATTACGTTGGA 1979 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1920 TCTCTTGGAGGGCCTGAAACGACTCTGTGAATACACAATTGCTCAGGATATAACATTGGA 1979 Query 1980 AAGTATAGGAGACATGTACGAGCTATCAGAAGCATTCCATGCGATGTCGCTGAGGCAAGC 2039 ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1980 AAGCATAGGAGACATGTACGAGCTCTCAGAAGCATTCCATGCAATGTCGCTGAGGCAAGC 2039 Query 2040 TTGTATCATGTTCATCCTGGAGCATTTCGATAAACTGAGTTCAATGCCTTGGCAGAACGA 2099 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2040 TTGTATCTTGTTCATCCTGGAGCATTTCGATAAACTGAGTTCAATGCCTTGGCAGAAGGA 2099 Query 2100 GCTGGTGCAGAGAACAATACCAGAGATAAGAGAGTACTTTTGTAGAGCCCTAACAAAGTC 2159 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2100 GCTGGTGCAGAGAACAATACCAGAGATAAGAGAGTACTTTTGTAGAGCTCTAACAAAGTC 2159 Query 2160 TACTACAAACCTGCAAAGCTTGAGGTTGTAGAATGCGGAAGAAGAAGACTGCACTTAACT 2219 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 2160 TACTACAAACCTGCAAAGCTTGAGGCTGTAGAATGTGGAAGAAGAAGACTGCACTTAACT 2219 Query 2220 AGAGGTAAGTAGACAAGGAATTATATagagagaaagagagagagagaTCAAGAGCCGCCA 2279 |||||||||||||||||||| | |||||| ||||||||||||| Sbjct 2220 AGAGGTAAGTAGACAAGGAA--A----GAGAGA--------------TCAAGAGCCGCCA 2259 Query 2280 TTAGAGGTCTTTATCGTCCTGTACTGG-GTTGTCT-TAGTTATTTGCTGTGCTTTTTGGT 2337 |||||||||||||| ||| ||| || | ||||| | |||||||||||||||||||| ||| Sbjct 2260 TTAGAGGTCTTTATGGTCATGT-CTTGAGTTGT-TATAGTTATTTGCTGTGCTTTT-GGT 2316 Query 2338 TCGTTTTGGTCATTT 2352 ||||||||||||||| Sbjct 2317 TCGTTTTGGTCATTT 2331 > Ahg317462 jgi|Araly1|317462|fgenesh1_pm.C_scaffold_3000478 Length=2067 Score = 1626 bits (880), Expect = 0.0 Identities = 1737/2138 (81%), Gaps = 110/2138 (5%) Strand=Plus/Plus Query 58 ATGGACCAACAACCGGAGAGGCGAGAAGGCCGGAGTTTTCCGGAGCGTAAAGGACAGAAG 117 ||||| ||||||||||| | || ||| | |||||| || |||||||| |||||||||||| Sbjct 1 ATGGAGCAACAACCGGAAAAGCTAGACGACCGGAGCTTCCCGGAGCGCAAAGGACAGAAG 60 Query 118 CGGAAGCTAGAGGAAGGAGCCGCCGCCGTAGAAGATCGAGAGATCTCTGCCGTCAG-CAC 176 | || || |||| || | | ||| || || |||||||| || || || ||| Sbjct 61 AGAAAACT---GGAA-GA-----AG--G-AGATGAGCGGGAGATCTCCGCTGT-AGCCAC 107 Query 177 CGACGGAGGCCAAGCGCTTCTTAGCGAGGTTGCTGCTCAAGTCTCGGTACTAAACTCTGC 236 |||||||||| | ||||| || | | ||| || ||||||| || ||||| | ||| | Sbjct 108 CGACGGAGGCGAGGCGCTCCTCCGAGTGGTCGCCACTCAAGTATCCGTACTGAGCTCCAC 167 Query 237 CTTCTCTTGGCAAG-AGTCCGATCGCGCTGCTGCCAAGCGAGCCACT-CAAGTTCTGGCT 294 ||||| ||| ||| || |||||||| | || || || || |||| | ||| |||| ||| Sbjct 168 TTTCTCCTGGAAAGAAG-CCGATCGCACCGCCGCAAAACGCGCCA-TCCAAATTCTAGCT 225 Query 295 GAGCTAGCCAAAAACGAGGATTTAG-TGAACGTGATTGTCGACGGAGGTGCTGTTCCAG- 352 ||||| ||||||||||| ||||| | || ||||||||||||| ||||| |||||||||| Sbjct 226 GAGCTCGCCAAAAACGAAGATTTTGTTG-ACGTGATTGTCGAGGGAGGGGCTGTTCCAGT 284 Query 353 -CTCTTATGACGCATCTACAGGCGCCACCATACAACGACGGGGACTTGGCTGAGAAGCCG 411 ||| | ||| |||||||||||| || || ||| || |||| | | || | || || Sbjct 285 TCTCGT-TGA-GCATCTACAGGCTCCGCCGTACGGTGATGGGG-C-T--CT-A-AAACCA 336 Query 412 TACGAACACGAAGTTGAGAAGGGAAGCGCTTTTGCGCTTGGTCT-TCTTGCTATTAAGCC 470 | ||||| || || ||||| ||||| || |||| |||||| | ||| || || ||||| Sbjct 337 TTGGAACATGAGGTAGAGAAAGGAAGTGCGCTTGCTCTTGGT-TATCTCGCGATCAAGCC 395 Query 471 AGAGTATCAGAAACTGATAGTAGACAAAGGTGCCTTACCTCAT-TTAGTGAATTTGTTGA 529 |||| | ||||| || ||| | ||| | ||||| || || ||| || |||||| | |||| Sbjct 396 AGAGCACCAGAAGCTAATAATTGACTATGGTGCATTGCCCCATCTT-GTGAATCTATTGA 454 Query 530 AGAGAAACAAAGATGGTTCTAGCTCTCGAGCTGTGAATAGTGTTATCAGAAGAGCGGCTG 589 ||||||||||| |||||||||| | | || | || |||| ||||||| ||||||| Sbjct 455 AGAGAAACAAAAATGGTTCTAG-T-T----CT-CG-AT-CTGTTCTCAGAAGGGCGGCTG 505 Query 590 ATGCCATCACCAATCTTGCTCATGAGAACAGCAGTATCAAGACCCGTGTTAGGGTAGAAG 649 |||| |||| ||||||||| |||||||| | || |||||| | || ||||||| |||||| Sbjct 506 ATGCTATCATCAATCTTGCCCATGAGAATAACACTATCAAAAACCTTGTTAGGTTAGAAG 565 Query 650 GCGGTATTCCACCTCTCGTGGAGTTGCTTGAATTTTCTGATTCAAAGGTCCAGAGAGCAG 709 | |||||||| ||||| |||||||||||||||||| |||| ||||| || ||| |||||| Sbjct 566 GAGGTATTCCGCCTCTTGTGGAGTTGCTTGAATTTGCTGACTCAAAAGTTCAGCGAGCAG 625 Query 710 CAGCAGGGGCATTGAGAACCCTTGCATTTAAAAATGATGATAACAAGAATCAGATAGTTG 769 |||||||||||||||||||||| || ||||||||||||| ||||||||| || ||||||| Sbjct 626 CAGCAGGGGCATTGAGAACCCTCGCGTTTAAAAATGATGCTAACAAGAACCAAATAGTTG 685 Query 770 AATGCAATGCTCTTCCCACA-CTT-ATTC-TAATGCTAGGATCAGAGGATGCTGCTATAC 826 | || ||||||||| ||| | || | || || |||||||||||||||| ||| | ||| Sbjct 686 ACTGTAATGCTCTT-CCA-ATGTTGA-TCTTACTGCTAGGATCAGAGGACGCTACGGTAC 742 Query 827 ATTATGAAGCGGTTGGAGTTATAGGCAATCTAGTACACTCGTCTCCACACATTAAAAAAG 886 |||||||||||||||| ||| | |||||||||||||||||||||| | ||||| |||||| Sbjct 743 ATTATGAAGCGGTTGGTGTTCTTGGCAATCTAGTACACTCGTCTCTAGACATT-AAAAAG 801 Query 887 -AGGTTCTT-ACTGCCGGGGCGTTGCAACCTGTCATTGGTCTTCTTAGCTCCTGTTGCCC 944 | |||||| | |||| |||| ||||| ||||| || ||||||| ||||| |||||||| Sbjct 802 AAAGTTCTTGA-TGCCAGGGCATTGCAGCCTGTAATCAGTCTTCTCAGCTCTTGTTGCCC 860 Query 945 TGAGAGTCAAAGAGAGGCGGCTTTATTACTTGGGCAGTTTGCCT-CAACTGATTCTGATT 1003 |||||| | |||||||| ||||| ||| |||| || |||| || | |||||||||||| Sbjct 861 TGAGAGCCGGAGAGAGGCAGCTTTGTTAATTGGCCAATTTG-CTGCTTCTGATTCTGATT 919 Query 1004 GTAAGGTGCACATTGTGCAAAGGGGTGCTGTCCGTCCTTTAATTGAGATGCTTCAGTCCC 1063 | |||| ||||| || |||||||| |||||| ||||||| ||| |||||||| |||| | Sbjct 920 GCAAGGCACACATAGTACAAAGGGGGGCTGTCTGTCCTTTGATTAAGATGCTTGAGTCAC 979 Query 1064 CGGATGTCCAGTTGAAGGAAATGTCGGCCTTTGCACTGGGTAGATTGGCACAGGATGCCC 1123 | || || |||||||||||||||| |||||||| |||| ||| ||||||||||| ||| Sbjct 980 CAGAAGTTAAGTTGAAGGAAATGTCAGCCTTTGCGTTGGGGAGACTGGCACAGGATTCCC 1039 Query 1124 ACAATCAAGCTGGTATTGCCCAT-AGTGGTGGTTTAGGACCTTTATTGAAGCTTCTCGAT 1182 ||||||||||||| ||||| ||| || |||| | |||||||||||||||||||||| || Sbjct 1040 ACAATCAAGCTGGCATTGCTCATAAG-GGTGCTCTAGGACCTTTATTGAAGCTTCTAGAA 1098 Query 1183 TCAAG-AAATGGATCAT-TGCAACACAATGCTGCATTTGCTCTTTATGGCCTTGCCGATA 1240 || || |||| ||| | |||||| ||| |||||||||||||||||||| ||||| |||| Sbjct 1099 TC-AGAAAATATATC-TCTGCAACGCAAAGCTGCATTTGCTCTTTATGGTCTTGCTGATA 1156 Query 1241 ATGAGGATAATGTGTCAGATTTTATCAGGGTGGGAGGTATCCAAAAGCTAC-AGGATGGA 1299 |||||||||||||||| | ||||||||| |||||||| |||| ||||| | | || ||| Sbjct 1157 ATGAGGATAATGTGTCTGCTTTTATCAGCGTGGGAGGCGTCCAGAAGCTTCTA-GAAGGA 1215 Query 1300 GAGTTTATTGTTCAAGCAACTAAAGATTGTGTTTCCAAAACACTAAAGAGATTGGAGGAG 1359 |||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||| | Sbjct 1216 AAGTTTATTGTTCAAGCAACTAAAGATTGTGTTACCAAAACAGTAAAAAGATTAGAGGGG 1275 Query 1360 AAGATTCATGGAAGAGTTCTGAGACATCTGTTGTACCTAATGCGCATTTCAGAGAAGTCT 1419 |||||||| ||||||||| | | |||||| |||||||| |||| || |||||| ||| || Sbjct 1276 AAGATTCAGGGAAGAGTTTTAACACATCTATTGTACCTGATGCACAGTTCAGACAAG-CT 1334 Query 1420 -ATCCAAAGACGAGTTGCTCTTGCCCTTGCTCATCTCTGTTCACCC-GAGGATCAACGAA 1477 ||||||||||||||||||||||| ||||| | ||||||||| ||| |||||||| |||| Sbjct 1335 TATCCAAAGACGAGTTGCTCTTGCTCTTGCCCTTCTCTGTTC-CCCAGAGGATCAGCGAA 1393 Query 1478 CCATATTCATAGATGACAACGGGTTGGAGTTGCTACTCGGTCTTCTTGGTTCTTTAAACA 1537 |||||||| | | | | | ||||| || || | | | | || | |||| Sbjct 1394 CCATATTCTT-GCT--C--C---TTGGACTT-CT--T-GAT-T-CTA----C---AAACG 1432 Query 1538 CTAAGCAGCAACTTGACGGTGCAGCAGCGT-TGTACAAAT-TAGCAAATAAATCTATGGC 1595 |||||||||||||||| |||| | ||| | | ||||| | ||||||||| ||||||||| Sbjct 1433 CTAAGCAGCAACTTGATAGTGCTGTAGC-TCTATACAA-TCTAGCAAATAGATCTATGGC 1490 Query 1596 ACTTTCTCCAGTTGATGCTGCTCCTCCTTCTCCAACACAAAGGGTTTATCTCGGAGAGCA 1655 |||||| ||| |||||||||||||| ||||||||||||| ||| ||||| |||||| | Sbjct 1491 GCTTTCTTTAGTCGATGCTGCTCCTCCATCTCCAACACAAATGGTATATCTTGGAGAGAA 1550 Query 1656 ATATGTAAATAATGCTACGCTGTCTGATGTAACCTTTCTAGTCGAAGGAAGGACATTCTA 1715 ||||||||||||||||||| |||||||||| ||||||||||| ||||| |||| |||||| Sbjct 1551 ATATGTAAATAATGCTACGTTGTCTGATGTGACCTTTCTAGTTGAAGGCAGGAGATTCTA 1610 Query 1716 TGCACACAGAATTTGTCTGCTGGCATCCTCAGATGCATTTCGTGCAATGTTTGATGGTGG 1775 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1611 TGCTCACAGAATTTGTCTGCTGGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGG 1670 Query 1776 TTACAGAGAAAAAGACGCTAGAGATATTGAGATTCCAAATAT-CAAATGGGAGGTGTTTG 1834 ||| |||||||||| || |||||||| |||||||||||||| ||| ||||| || |||| Sbjct 1671 CTACCGAGAAAAAGATGCAAGAGATATCGAGATTCCAAATATTCAA-TGGGAAGTTTTTG 1729 Query 1835 AGTTAATGATGAGGTTTATATACACTGGATCTGTCGACATAACAAATGAGATAT-CAAAA 1893 ||||||||||||||||| ||||||| || || ||| |||| ||||| ||||| | || || Sbjct 1730 AGTTAATGATGAGGTTTCTATACACGGGTTCAGTCAACATCACAAAAGAGAT-TGCAGAA 1788 Query 1894 GATCTTCTAAGAGCAGCGGATCAGTATCTCTTGGAGGGCCTGAAACGACTCTGTGAATAC 1953 || ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct 1789 GACCTTCTAAGAGCAGCGGATCAGTATCTCTTGGAGGGGCTCAAGCGACTCTGTGAATAC 1848 Query 1954 ACAATTGCTCAGGATATTACGTTGGA-AAGTATAGG-AGACATGTACGAGCTATCAGAAG 2011 | |||| ||||||||| | | |||| || ||||| || || |||||| || ||||||| Sbjct 1849 ATTATTGGTCAGGATATAATGGTGGAGAAC-ATAGGGAG-CAAGTACGATCTCTCAGAAG 1906 Query 2012 CATTCCATGCGATGTCGCTGAGGCA-AGCTTGTATCATGTTCATCCTGGAGCA-TTTCGA 2069 ||||| | || | ||| |||| ||| | |||||||| | |||||||| | || ||| || Sbjct 1907 CATTCAACGCAAAGTCACTGAAGCAGA-CTTGTATCTTATTCATCCTTAAACACTTT-GA 1964 Query 2070 TAAACTGAGTTCAATGCCTTGG-CAGAACGAGCTGGTGCAGAGAACAATACCAGAGATAA 2128 ||||||| ||| || || || | ||| | ||||||||| ||||||| ||||||||| Sbjct 1965 TAAACTGCGTTTAAAACCCGGGACT-AACCAACTGGTGCAGCGAACAATCCCAGAGATAC 2023 Query 2129 G-AGAGTACTTTTGTAGAGCCCT-AACAAAGTCTACTA 2164 | | | ||| | ||||||| ||| ||||| | |||||| Sbjct 2024 GCAAA-TACATGTGTAGAGTCCTCAACAA-GACTACTA 2059 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93892453925 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5