BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G23010.1 Length=1729 Score E Sequences producing significant alignments: (Bits) Value Ahg941819 jgi|Araly1|941819|scaffold_602363.1 2241 0.0 Ahg941820 jgi|Araly1|941820|scaffold_602364.1 1559 0.0 Ahg326599 jgi|Araly1|326599|fgenesh1_pm.C_scaffold_6001819 1548 0.0 > Ahg941819 jgi|Araly1|941819|scaffold_602363.1 Length=1573 Score = 2241 bits (1213), Expect = 0.0 Identities = 1438/1548 (93%), Gaps = 9/1548 (1%) Strand=Plus/Plus Query 54 TCTTT-TTTCTCCTACGTACTCCATAGTGATGGCTTCATCGCTTCTGACATCTTCCGTTA 112 ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||| || Sbjct 1 TCTTTCTTTCTCCTACATACTCCATAGTTATGGCTTCATCACTTCTGACATCTTCCGGTA 60 Query 113 TGATCCCTACCACCGGTTCCACCGTGGTTGGCCGGTCAGTGTTACCCTTTCAATCTTCCC 172 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGATCCATACCACCGGTTCCACCGTGGTTGGCCGGTCAGTGTTACCCTTTCAATCTTCCC 120 Query 173 TGCACTCTCTCCGCCTGACCCATTCGTACAAGAACCCCGCAT-TGTTCATCTCATGTTGC 231 |||||||||| || || |||||| | |||||||| || |||| | ||||||||||||||| Sbjct 121 TGCACTCTCTTCGTCTCACCCATCCATACAAGAAGCCGGCATAT-TTCATCTCATGTTGC 179 Query 232 TCTTCTGTGTCCAAAAATGCGGCAACTAGTTCTACTGATCTCAAACCCGTTGTGGAACGG 291 |||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||| Sbjct 180 TCTTCTGTATCCAAAAATGGGGCAACTAATGCTACTGATCTCAAACCCGTTGTGGAACGG 239 Query 292 TGGCCGGAGTACATACCGAACAAGCTTCCCGACGGA-AACTATGTGCGTGTATTCGACAC 350 ||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| Sbjct 240 TGGCCGGAGTACATACCAAACAAGCTCCCCGAC-AACAACTATGTGCGTGTATTCGACAC 298 Query 351 GACGCTCCGTGACGGTGAACAATCTCCTGGTGGATCCCTCACTCCGCCGCAGAAGCTAGA 410 ||| |||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||| Sbjct 299 GACACTCCGTGATGGTGAACAAGCTCCCGGTGGATCCCTTACTCCGCCGCAGAAGCTAGA 358 Query 411 GATTGCCCGACAGCTCGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTCCGGGATC 470 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 GATTGCCCGGCAGCTTGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTCCGGGATC 418 Query 471 ATCTGAAGAAGAGTTAGAAACCATTAAGACCATCGCCAAGACTGTGGGGAATGAGGTGGA 530 |||||||||||||||||||||| |||| || ||||| ||||| ||||||||||||||||| Sbjct 419 ATCTGAAGAAGAGTTAGAAACCGTTAAAACTATCGCTAAGACCGTGGGGAATGAGGTGGA 478 Query 531 TGAGGAAACAGGTTACGTCCCTGTGATATGCGCCATAGCTCGATGCAAACATAGAGACAT 590 ||||||||||||||||||||| || ||||||||||| || ||| |||||||||||||||| Sbjct 479 TGAGGAAACAGGTTACGTCCCCGTAATATGCGCCATCGCACGAAGCAAACATAGAGACAT 538 Query 591 TGAGGCGACTTGGGAGGCGCTGAAGTACGCGAAGAGGCCAAGGATACTCGTATTCACATC 650 ||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct 539 TGAGGCGGCTTGGGAGGCGGTAAAGTACGCGAAGAGGCCAAGGATACTCATATTCACATC 598 Query 651 TACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTCAAGAAGAAGTGATTGAGAT 710 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 599 TACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAGGTGATTGAGAT 658 Query 711 GGCCGTGAGTAGTATTAGGTTTGCTAAAAGCTTGGGCTTCAATGACATCCAGTTTGGGTG 770 ||||||||||||||| ||| | |||||||||||||||||||| |||||||| |||||||| Sbjct 659 GGCCGTGAGTAGTATCAGGCTCGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTG 718 Query 771 CGAAGATGGCGGCAGGTCGGACAAGGATTTCCTATGCAAGATTCTAGGAGAAGCCATAAA 830 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 719 CGAAGATGGCGGCAGGTCGGACAAGGAGTTCCTATGCAAGATTCTAGGAGAAGCAATAAA 778 Query 831 AGCCGGTGTTACGGTGGTGACCATCGGTGATACGGTAGGGATCAACATGCCACATGAATA 890 ||| |||||||||||||||| | ||| || ||||||||||||||||||||||||||||| Sbjct 779 AGCGGGTGTTACGGTGGTGAACGTCGCAGACACGGTAGGGATCAACATGCCACATGAATA 838 Query 891 CGGGGAACTCGTGACTTATCTCAAAGCAAACACCCCTGGAATTGACGATGTTGTCGTC-G 949 || |||||||| || ||||||||||||||||| ||||||||||| ||| | ||| || | Sbjct 839 TGGAGAACTCGTAACCTATCTCAAAGCAAACACTCCTGGAATTGATGATATCGTCTTCAG 898 Query 950 CTGTTCATTGTCACAACGACCTTGGTCTTGCAACCGCCAACTCAATCGCCGGTATACGTG 1009 |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct 899 -TGTTCATTGTCACAACGATCTTGGTCTTGCTACTGCCAACTCAATCGCCGGTATACGTG 957 Query 1010 CGGGAGCAAGACAGGTCGAAGTAACTATCAACGGAATTGGTGAAAGAAGTGGCAATGCGT 1069 ||||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 958 CGGGAGCAAGACAAGTGGAAGTAACGATCAACGGAATTGGTGAGAGAAGTGGGAATGCGT 1017 Query 1070 CGCTTGAGGAGGTCGTGATGGCTTTGAAATGTCGAGGGGCATATGTGATCAATGGGGTTT 1129 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1018 CGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGCATATGTGATCAATGGTGTTT 1077 Query 1130 ACACAAAAATAGACACACGCCAAATCATGGCTACCAGCAAGATGGTTCAAGAGTACACGG 1189 |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct 1078 ACACAAGAATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGTACACCG 1137 Query 1190 GCTTGTATGTTCAAGCACATAAGCCCATAGTTGGAGCGAACTGTTTTGTTCATGAGAGCG 1249 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1138 GCTTGTATGTTCAACCACATAAGCCCATAGTTGGAGCCAACTGTTTTGTTCATGAGAGCG 1197 Query 1250 GCATTCATCAGGATGGAATATTGAAAAATAGGAGTACTTATGAGATCTTATCACCAGAAG 1309 ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 1198 GCATTCACCAGGATGGAATATTGAAAAATCGGAGTACATATGAGATCTTATCACCAGAAG 1257 Query 1310 ATATTGGGATTGTAAAATCTCAAAATTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGTC 1369 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1258 ATATTGGGGTCGTAAAATCTCAAAACTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGTC 1317 Query 1370 ACGCTGTGAAAGATCGGCTGAAAGAGTTGGGATATGAACTCGATGATGAGAAATTGAACG 1429 | |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 1318 ATGCTGTGAAAGATCGGCTGAACGAGTTGGGATATGAACTCGATGATGAGAAACTGAACG 1377 Query 1430 -CTGTCTTCTCACTATTCAGAGATTTAACCAAGAATAAAAAGAGAATCACGGATGCTGAT 1488 | |||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct 1378 AC-GTCTTCTCACGGTTCAGAGATCTAACCAAGCATAAAAAGAGGATCACGGATGCTGAT 1436 Query 1489 TTGAAGGCATTAGTAACATCTAGCGATGAAATCTCTTTGGAGAAATTAAACGGCGCTAAC 1548 ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1437 ATGAAGGCGTTAGTAACATCTAGCGACGAAATCTCTTTAGAGAAATTAAACGGCGCTAAC 1496 Query 1549 GGTTTAAAGTCTAACGGCTATATACCAGTTCCTCAGGTTTCATCGAAT 1596 ||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1497 GGTTTAAAGTCTAACGGCTATGTACCAGTTCCTCAGGTTTCATCAAAT 1544 > Ahg941820 jgi|Araly1|941820|scaffold_602364.1 Length=1551 Score = 1559 bits (844), Expect = 0.0 Identities = 1283/1494 (86%), Gaps = 33/1494 (2%) Strand=Plus/Plus Query 61 TCTCCTACGTACTCCATAGTGATGGCTTCATCGCTTCTGACATCTTCC-GTTATGAT-CC 118 |||||||||||||| ||||| |||| ||| | ||||| ||||||||| | |||||| | Sbjct 1 TCTCCTACGTACTCTATAGTAATGGTTTCGTTTCTTCTCACATCTTCCAG-TATGATAAC 59 Query 119 CTACCACCGGTTCCACCGTGGTTGGCCGGTCAGTGTTACCCTTTCAATCTTCCC-TGCAC 177 | ||||| || || || ||||| |||||||| ||||||| || |||||||| | | | Sbjct 60 C-ACCACATGTCCCTCCATGGTTCTCCGGTCAGGGTTACCCATTGGATCTTCCCTTTC-C 117 Query 178 TCTCTCCGCCTGACCCATTCGTACAAGAACCCCG-CATTGTTCATCTCATGTTGCTCTTC 236 ||||| |||||||||| | | ||||| || || | ||||||| |||||||| |||||| Sbjct 118 TCTCTTCGCCTGACCCGTCCATACAACAA-GGCGACTTTGTTCACCTCATGTTACTCTTC 176 Query 237 TGTGTCCAAAAATGCGGCAACTAGTTCTACTGATCTCAAACCCGTTGTGGAACGGTGGCC 296 || ||||||||| | ||||| ||| | ||||||||||||| | ||||||||| |||| Sbjct 177 TGAGTCCAAAAAGGTGGCAAGTAG---TGCTGATCTCAAACCTGCCGTGGAACGGAGGCC 233 Query 297 GGAGTACATACCGAACAAGCTTCC-CGACGGA-AACTATGTGCGTGTATTCGACACGACG 354 ||||||||||||||||||||||| | || | |||||||| |||||||| ||||||||| Sbjct 234 AGAGTACATACCGAACAAGCTTCCTC-AC-AAGAACTATGTTCGTGTATTAGACACGACG 291 Query 355 CTCCGTGACGGTGAACAATCTCCTGGTGGATCCCTCACT-CCGCCGCAGAAGCTAGAGAT 413 |||||||| |||||||||||||| |||| | | || | | || ||||||||||||||||| Sbjct 292 CTCCGTGATGGTGAACAATCTCCCGGTGCAGCACTTA-TCCCACCGCAGAAGCTAGAGAT 350 Query 414 TGCCCGACAGCTCGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTCCGG-GATCAT 472 |||||||||||| |||||||||||||| |||||||||||||| |||||||||| | || | Sbjct 351 TGCCCGACAGCTTGCTAAACTCCGAGTTGACATCATGGAAGTTGGTTTTCCGGTG-TCGT 409 Query 473 CTGAAGAAGAGTTAGAAACCATTAAGACCATCGCCAAGACTGTGGGGAATGAGGTGGATG 532 |||| |||||||| ||| ||||||| |||||||||||||| |||||||| |||||||||| Sbjct 410 CTGAGGAAGAGTTCGAAGCCATTAAAACCATCGCCAAGACCGTGGGGAACGAGGTGGATG 469 Query 533 AGGAAACAGGTTACGTCCCTGTGATATGCGCCATAGCTCGATGCAAACATAGAGACATTG 592 |||||||||||||||||||||||||||||| ||| || ||||||||| |||||||||||| Sbjct 470 AGGAAACAGGTTACGTCCCTGTGATATGCGGCATTGCCCGATGCAAAAATAGAGACATTG 529 Query 593 AGGCGACTTGGGAGGCGCTGAAGTACGCGAAGAGGCCAAGGATACT-CGTATTCACATCT 651 ||||| |||||||||| |||||||| ||||||||||| ||| || | | ||||||||||| Sbjct 530 AGGCGGCTTGGGAGGCACTGAAGTATGCGAAGAGGCCCAGGGTAATAC-TATTCACATCT 588 Query 652 ACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTCAAGAAGAAGTGATTGAGATG 711 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 589 ACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGTGATCGAGATG 648 Query 712 GCCGTGAGTAGTATTAGGTTTGCTAAAAGCTTGGGCTTCAATGACATCCAGTTTGGGTGC 771 ||||||| ||| ||| || |||||||||||||||||||| |||||||| ||||||||| Sbjct 649 GCCGTGAACAGTGTTAAGTACGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTGC 708 Query 772 GAAGATGGCGGCAGGTCGGACAAGGATTTCCTATGCAAGATTCTAGGAGAAGCCATAAAA 831 ||||||||||||||| |||| |||||||| ||||| ||||||||||||||| | || ||| Sbjct 709 GAAGATGGCGGCAGGACGGAGAAGGATTTTCTATGTAAGATTCTAGGAGAAACGATTAAA 768 Query 832 GCCGGTGTTACGGTGGTGACCATCG-GTGATACGGTAGGGATCAACATGCCAC-ATGAAT 889 || |||| || |||| | | | | || ||||| |||||||||||||| | | |||| Sbjct 769 GCGGGTGCAACCACGGTGGGCTTTGCG-GACACGGTCGGGATCAACATGCCGCCA-GAAT 826 Query 890 ACGGGGAACTCGTGACTTATCTCAAAGCAAACACCCCTGGAATTGACGATGTTGTCGTCG 949 ||| ||||||||| | ||| |||||| |||||| |||||| ||| ||| ||||||||| Sbjct 827 TCGGAGAACTCGTGGCCTATGTCAAAGAAAACACTCCTGGAGCTGATGATATTGTCGTCG 886 Query 950 CTGTTCATTGTCACAACGACCTTGGTCTTGCAACCGCCAACTCAATCGCCGGTATACGTG 1009 | ||||||| ||||||||||||||| |||| ||||||||| |||| |||||||| ||| Sbjct 887 CCATTCATTGCCACAACGACCTTGGTGTTGCTACCGCCAACACAATATCCGGTATATGTG 946 Query 1010 CGGGAGCAAGACAGGTCGAAGTAACTATCAACGGAATTGGTGAAAGAAGTGGCAATGCGT 1069 |||||||||||| || |||||||| |||||||||||||||||||||||||| |||||| Sbjct 947 GGGGAGCAAGACAAGTAGAAGTAACGATCAACGGAATTGGTGAAAGAAGTGGGAATGCGC 1006 Query 1070 CGCTTGAGGAGGTCGTGATGGCTTTGAAATGTCGAGGGGCATATGTGATCAATGGGGTTT 1129 ||||||| ||||||||||||||||||||||||||||| | |||| | || |||| |||| Sbjct 1007 CGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATATCTTATGGATGGTGTTT 1066 Query 1130 ACACAAAAATAGACACACGCCAAATCATGGCTACCAGCAAGATGGTTCAAGAGTACACGG 1189 ||||||||||||||||||||||||| |||||||| |||||||||||||||||| | || | Sbjct 1067 ACACAAAAATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGCATACCG 1126 Query 1190 GCTTGTATGTTCAAGCACATAAGCCCATAGTTGGAG-CGAACTGTTTTGTTCATGAGAGC 1248 || ||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||| Sbjct 1127 GCATGTATGTTCAACCACATAAGCCAATAGTTGGAGAC-AACTGTTTTGTTCATGAGAGC 1185 Query 1249 GGCATTCATCAGGATGGAATATTGAAAAATAGGAGTACTTATGAGATCTTATCACCAGAA 1308 |||||||| ||||||||||||||||||||| | ||||| |||||||| |||||||||||| Sbjct 1186 GGCATTCACCAGGATGGAATATTGAAAAATCGAAGTACATATGAGATTTTATCACCAGAA 1245 Query 1309 GATATTGGGATTGTAAAATCTCAAAATTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGT 1368 ||| ||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||| Sbjct 1246 GATGTTGGGATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGCTTAGTGGACGT 1305 Query 1369 CACGCTGTGAAAGATCGGCTGAAAGAGTTGGGATATGAACTC-GATGATGAGAAATTGAA 1427 || ||||| ||||| ||||| |||||||||||||||||| || | |||||||||||| || Sbjct 1306 CATGCTGTAAAAGACCGGCTTAAAGAGTTGGGATATGAAATCAG-TGATGAGAAATTCAA 1364 Query 1428 CG-CTGTCTTCTCACTATTCAGAGATTTAACCAAGAATAAAAAGAGAATCACGGATGCTG 1486 || | ||||||||| || |||||| ||||||||| | ||||||||||||||||| | || Sbjct 1365 CGACA-TCTTCTCACGATACAGAGAATTAACCAAGGAGAAAAAGAGAATCACGGACGATG 1423 Query 1487 ATTTGAAGGCATTAGTAAC-ATCTAGCGATGAAATCTCTTTGGAGAAATTAAAC 1539 || |||| |||||||| | | | ||||||||||| | || ||||||||| Sbjct 1424 ATCTGAAAGCATTAGTGGTGAACG-GTGATGAAATCTCATCAGATAAATTAAAC 1476 > Ahg326599 jgi|Araly1|326599|fgenesh1_pm.C_scaffold_6001819 Length=1503 Score = 1548 bits (838), Expect = 0.0 Identities = 1211/1391 (87%), Gaps = 26/1391 (2%) Strand=Plus/Plus Query 82 ATGGCTTCATCGCTTCTGACATCTTCCGTTATGATC-CCTACCACCGGTTCCACCGTGGT 140 |||||||| | ||||| ||||||| || ||||||| || ||||||||| ||||| | || Sbjct 1 ATGGCTTCGTTACTTCTCACATCTTTCGGTATGATCACC-ACCACCGGTCCCACCCTTGT 59 Query 141 TGGCCGGTCAGTGTTACCCTTTCAATCTTCCCTGCACTCTCTCCGCCTGACCCATTCGTA 200 || |||||||||||||||| || |||||| | || ||| |||||||||||| ||| Sbjct 60 TGTCCGGTCAGTGTTACCCATTGGATCTTCTCAGCCCTCAATCCGCCTGACCCGCCCGTG 119 Query 201 CAAGAACCCCG-CATTGTTCATCTCATGTTGCTCTTCTGTGTCCAAAAATGCGGCAACTA 259 ||| || ||| | |||||||||||||||||||| |||| ||||||||| | || ||||| Sbjct 120 CAACAA-GCCGACTTTGTTCATCTCATGTTGCTCCTCTGAGTCCAAAAAGGTGGTAACTA 178 Query 260 GTTCTACTGATCTCAAACCCGTTGTGGAACGGTGGCCGGAGTACATACCGAACAAGCTTC 319 || ||||||| |||||||| | |||||||||||||| |||||||||||||||||||| | Sbjct 179 GTGCTACTGACCTCAAACCTATCGTGGAACGGTGGCCAGAGTACATACCGAACAAGCTCC 238 Query 320 CCGACGGA-AACTATGTGCGTGTATTCGACACGACGCTCCGTGACGGTGAACAATCTCCT 378 ||||| | |||||||| |||||| |||||||||| || ||||| || |||||| |||| Sbjct 239 CCGAC-AAGAACTATGTACGTGTACTCGACACGACACTTCGTGAGGGCGAACAAGCTCCA 297 Query 379 GGTGGATCCCTCACTCCGCCGCAGAAGCTAGAGATTGCCCGACAGCTCGCTAAACTCCGA 438 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 298 GGTGGATCCCTTACTCCGCCGCAGAAGCTAGAGATTGCCCGGCAACTCGCTAAACTCCGA 357 Query 439 GTAGACATCATGGAAGTCGGTTTTCCGGGATCATCTGAAGAAGAGTTAGAAACCATTAAG 498 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| Sbjct 358 GTAGACATCATGGAAGTCGGTTTTCCGGGGTCATCTGATGAAGAGTTCGAAACCGTTAAA 417 Query 499 ACCATCGCCAAGACTGTGGGGAATGAGGTGGATGAGGAAACAGGTTACGTCCCTGTGATA 558 || ||||| ||||| ||||||||||||||||||| |||||||||||| ||||| |||||| Sbjct 418 ACTATCGCTAAGACCGTGGGGAATGAGGTGGATGTGGAAACAGGTTATGTCCCGGTGATA 477 Query 559 TGCGCCATAGCTCGATGCA-AACATAGAGACATTGAGGC-GACTTGGGAGGCGCTGAAGT 616 | | || | || ||||||| || |||||||| ||||||| | ||||| ||||| |||||| Sbjct 478 TCCACCCTCGCACGATGCATAA-ATAGAGACGTTGAGGCCG-CTTGGAAGGCGGTGAAGT 535 Query 617 ACGCGAAGAGGCCAAGGATACT-CGTATTCACATCTACTAGTGACATTCACATGAAATAT 675 |||||||||||||||||||| | | |||| |||||||||||||| ||||||||||| ||| Sbjct 536 ACGCGAAGAGGCCAAGGATA-TGCATATTTACATCTACTAGTGATATTCACATGAACTAT 594 Query 676 AAGTTGAAAAAGACTCAAGAAGAAGTGATTGAGATGGCCGTGAGTAGTATTAGGTTTGCT 735 ||||||||||||||| ||||||||||||| |||||| || |||||||||||||||| ||| Sbjct 595 AAGTTGAAAAAGACTAAAGAAGAAGTGATCGAGATGTCCTTGAGTAGTATTAGGTTCGCT 654 Query 736 AAAAGCTTGGGCTTCAATGACATCCAGTTTGGGTGCGAAGATGGCGGCAGGTCGGACAAG 795 |||||||| |||||| |||||||||| ||||| |||||||| ||| |||||||||| ||| Sbjct 655 AAAAGCTTAGGCTTCCATGACATCCAATTTGGTTGCGAAGACGGCTGCAGGTCGGAGAAG 714 Query 796 GA-TTTCCTATGCAAGATTCTAGGAGAAGCCATAAAAGCCGGTGTTACGGT-GGTGACCA 853 || ||| |||| ||||||||||||||||| |||||||| |||| ||| | |||| || Sbjct 715 GAGTTTG-TATGTAAGATTCTAGGAGAAGCGATAAAAGCGGGTGCTACT-TCGGTGTGCA 772 Query 854 TCG-GTGATACGGTAGGGATCAACATGCCACATGAATACGGGGAACTCGTGAC-TTATCT 911 ||| | || ||||||||||||| |||||||||||||| ||| ||||||||||| || | | Sbjct 773 TCGCG-GACACGGTAGGGATCACCATGCCACATGAATTCGGAGAACTCGTGACCTT-TGT 830 Query 912 CAAAGCAAACACCCCTGGAATTGACGATGTTGTCGTC-GCTGTTCATTGTCACAACGACC 970 |||||||||||| || |||||||| ||||||||| || || ||||||||||||||||||| Sbjct 831 CAAAGCAAACACTCCAGGAATTGATGATGTTGTCTTCAGC-GTTCATTGTCACAACGACC 889 Query 971 TTGGTCTTGCAACCGCCAACTCAATCGCCGGTATACGTGCGGGAGCAAGACAGGTCGAAG 1030 |||||||||| ||||| ||| ||||||| | | || |||| |||| ||||| |||||| Sbjct 890 TTGGTCTTGCTACCGCAAACACAATCGCTGCTGTATGTGCCGGAGTGAGACAATTCGAAG 949 Query 1031 TAACTATCAACGGAATTGGTGAAAGAAGTGGCAATGCGTCGCTTGAGGAGGTCGTGATGG 1090 |||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| Sbjct 950 TAACAATCAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAAGAGGTCGTGATGG 1009 Query 1091 CTTTGAAATGTCGAGGGGCATATGTGATCAATGGGGTTTACACAAAAATAGACACACGCC 1150 |||||||||||||||| |||||| | || |||| |||||||||| |||||||||||||| Sbjct 1010 CTTTGAAATGTCGAGGAGCATATCTTATGGATGGTGTTTACACAAGAATAGACACACGCC 1069 Query 1151 AAATCATGGCTACCAGCAAGATGGTTCAAGAGTACACGGGCTTGTATGTTCAAGCACATA 1210 |||| |||||||| |||||||||||||||||| | || ||||||||||||||| |||||| Sbjct 1070 AAATTATGGCTACTAGCAAGATGGTTCAAGAGCATACCGGCTTGTATGTTCAACCACATA 1129 Query 1211 AGCCCATAGTTGGAG-CGAACTGTTTTGTTCATGAGAGCGGCATTCATCAGGATGGAATA 1269 |||| |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1130 AGCCAATAGTTGGAGAC-AACTGTTTTGTTCATGAAAGCGGCATTCACCAGGATGGAATA 1188 Query 1270 TTGAAAAATAGGAGTACTTATGAGATCTTATCACCAGAAGATATTGGGATTGTAAAATCT 1329 || |||||| | ||||| |||||||| ||||||||||||||| |||| || |||||||| Sbjct 1189 TTAAAAAATCGAAGTACATATGAGATTTTATCACCAGAAGATGTTGGAATCGTAAAATCG 1248 Query 1330 CAAAATTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGTCACGCTGTGAAAGATC-GGCT 1388 |||||||| ||| |||||||||||||||||||||||||||| ||| | ||||| | |||| Sbjct 1249 CAAAATTCAGGCATTGTTCTTGGAAAGCTTAGTGGACGTCATGCTATAAAAGA-CAGGCT 1307 Query 1389 GAAAGAGTTGGGATATGAACTCGATGATGAGAAATTGAACGCTGTCTTCTCACTATTCAG 1448 |||||||||||||||||| |||||||||||||||| |||| ||||||||| |||||| Sbjct 1308 TAAAGAGTTGGGATATGAAATCGATGATGAGAAATTCAACGAAATCTTCTCACGATTCAG 1367 Query 1449 AGATTTAACCA 1459 ||||||||||| Sbjct 1368 AGATTTAACCA 1378 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64867687235 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5