BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G23020.1 Length=1799 Score E Sequences producing significant alignments: (Bits) Value Ahg941820 jgi|Araly1|941820|scaffold_602364.1 2390 0.0 Ahg326599 jgi|Araly1|326599|fgenesh1_pm.C_scaffold_6001819 1748 0.0 Ahg941819 jgi|Araly1|941819|scaffold_602363.1 1513 0.0 > Ahg941820 jgi|Araly1|941820|scaffold_602364.1 Length=1551 Score = 2390 bits (1294), Expect = 0.0 Identities = 1471/1557 (94%), Gaps = 10/1557 (1%) Strand=Plus/Plus Query 62 TCTCCTACTTTCTCTATAGTAATGGCTTCGTTACTTCTCACATCGTCGAGTATGATAACC 121 |||||||| | |||||||||||||| |||||| ||||||||||| || |||||||||||| Sbjct 1 TCTCCTACGTACTCTATAGTAATGGTTTCGTTTCTTCTCACATCTTCCAGTATGATAACC 60 Query 122 ACTAGC-TGTCGCTCCATGGTTCTCCGGTCAGGGTTACCCATCGGATCTT-CTTTTCCCT 179 || | | |||| |||||||||||||||||||||||||||||| ||||||| | ||| ||| Sbjct 61 ACCA-CATGTCCCTCCATGGTTCTCCGGTCAGGGTTACCCATTGGATCTTCCCTTT-CCT 118 Query 180 CTCTTCGCCTGACCCGTCCATACGACAAGGCGACTCTGTTCGTCTCATGTTGCTCCGCTG 239 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||| ||| Sbjct 119 CTCTTCGCCTGACCCGTCCATACAACAAGGCGACTTTGTTCACCTCATGTTACTCTTCTG 178 Query 240 AGTCCAAAAAGGTGGCAACTAGTGCTACTGATCTCAAACCTATCATGGAACGGAGGCCGG 299 |||||||||||||||||| ||||| |||||||||||||| | ||||||||||||| | Sbjct 179 AGTCCAAAAAGGTGGCAAGTAGTG---CTGATCTCAAACCTGCCGTGGAACGGAGGCCAG 235 Query 300 AGTACATTCCGAACAAGCTTCCCCACAAGAACTATGTGCGTGTATTAGACACGACGCTTC 359 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| | Sbjct 236 AGTACATACCGAACAAGCTTCCTCACAAGAACTATGTTCGTGTATTAGACACGACGCTCC 295 Query 360 GTGACGGTGAACAATCTCCCGGTGCAGCACTTACT-CCACCGCAGAAGTTAGAGATTGCC 418 |||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct 296 GTGATGGTGAACAATCTCCCGGTGCAGCACTTA-TCCCACCGCAGAAGCTAGAGATTGCC 354 Query 419 AGGCAGCTAGCTAAACTCCGAGTAGACATCATGGAAGTTGGTTTTCCGGTGTCGTCTGAG 478 | ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 355 CGACAGCTTGCTAAACTCCGAGTTGACATCATGGAAGTTGGTTTTCCGGTGTCGTCTGAG 414 Query 479 GAAGAATTCGAAGCTATTAAAACCATCGCCAAGACCGTGGGGAACGAGGTGGATGAGGAA 538 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GAAGAGTTCGAAGCCATTAAAACCATCGCCAAGACCGTGGGGAACGAGGTGGATGAGGAA 474 Query 539 ACCGGTTACGTTCCTGTGATATGCGGCATTGCACGATGCAAAAAGAGAGACATCGAGGCA 598 || |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 475 ACAGGTTACGTCCCTGTGATATGCGGCATTGCCCGATGCAAAAATAGAGACATTGAGGCG 534 Query 599 ACTTGGGAGGCACTGAAGTATGCGAAGAGGCCGAGGGTAATGCTATTCACATCTACTAGT 658 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 535 GCTTGGGAGGCACTGAAGTATGCGAAGAGGCCCAGGGTAATACTATTCACATCTACTAGT 594 Query 659 GAAATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGTGATCGAGATGGCCGTG 718 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 595 GACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGTGATCGAGATGGCCGTG 654 Query 719 AACAGTGTTAAGTACGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTGCGAAGAT 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 AACAGTGTTAAGTACGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTGCGAAGAT 714 Query 779 GGCGGCAGGACGGAGAAAGATTTTATATGTAAGATTCTAGGAGAATCGATAAAAGCGGGT 838 ||||||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| Sbjct 715 GGCGGCAGGACGGAGAAGGATTTTCTATGTAAGATTCTAGGAGAAACGATTAAAGCGGGT 774 Query 839 GCAACCACGGTGGGGTTTGCGGACACGGTCGGGATCAACATGCCGCAAGAATTCGGAGAA 898 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 775 GCAACCACGGTGGGCTTTGCGGACACGGTCGGGATCAACATGCCGCCAGAATTCGGAGAA 834 Query 899 CTCGTGGCCTATGTCATAGAAAACACTCCAGGGGCTGATGATATTGTCTTCGCCATTCAT 958 |||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||| Sbjct 835 CTCGTGGCCTATGTCAAAGAAAACACTCCTGGAGCTGATGATATTGTCGTCGCCATTCAT 894 Query 959 TGTCATAACGACCTTGGTGTTGCTACCGCCAACACAATATCCGGTATATGTGCGGGAGCA 1018 || || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 895 TGCCACAACGACCTTGGTGTTGCTACCGCCAACACAATATCCGGTATATGTGGGGGAGCA 954 Query 1019 AGACAAGTCGAAGTGACGATCAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAA 1078 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 955 AGACAAGTAGAAGTAACGATCAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAA 1014 Query 1079 GAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATCTCTGATGGATGGTGTTTACACAAAA 1138 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 1015 GAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATATCTTATGGATGGTGTTTACACAAAA 1074 Query 1139 ATAGACTCACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGCATACCGGCATGTAT 1198 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 ATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGCATACCGGCATGTAT 1134 Query 1199 GTTCAACCACATAAGCCAATAGTTGGAGACAACTGTTTTGTTCATGAGAGCGGCATTCAC 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1135 GTTCAACCACATAAGCCAATAGTTGGAGACAACTGTTTTGTTCATGAGAGCGGCATTCAC 1194 Query 1259 CAGGATGGAATATTGAAAAATCGAAGTACATATGAGATCTTATCACCAGAAGATGTTGGG 1318 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1195 CAGGATGGAATATTGAAAAATCGAAGTACATATGAGATTTTATCACCAGAAGATGTTGGG 1254 Query 1319 ATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGCTTAGCGGACGTCATGCTGTA 1378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1255 ATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGCTTAGTGGACGTCATGCTGTA 1314 Query 1379 AAAGACCGGCTTAAAGAGTTGGGATATGAAATCAGTGATGAGAAATTCAACGACATCTTC 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 AAAGACCGGCTTAAAGAGTTGGGATATGAAATCAGTGATGAGAAATTCAACGACATCTTC 1374 Query 1439 TCACGATACAGAGAATTAACGAAGGACAAAAAGAGAATCACAGACGCTGATCTGAAGGCA 1498 |||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||| ||| Sbjct 1375 TCACGATACAGAGAATTAACCAAGGAGAAAAAGAGAATCACGGACGATGATCTGAAAGCA 1434 Query 1499 TTAGTGGTGAACGGTGCTGAAATCTCATCAGAAAAATTAAACAGTAAAGGAATTAACGAC 1558 |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| || Sbjct 1435 TTAGTGGTGAACGGTGATGAAATCTCATCAGATAAATTAAACAGTAAAGGAATCAACAAC 1494 Query 1559 CTTATGTCAAGCCCTCAGATTTCCGCTGTTGTATAAGTTTGGGAAGACATT-GTGTA 1614 ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1495 CTTTTGTCAAGCCCTCAGATTTCCGCTGTTGTATAAGTTTGTAAAGACATTTGTGTA 1551 > Ahg326599 jgi|Araly1|326599|fgenesh1_pm.C_scaffold_6001819 Length=1503 Score = 1748 bits (946), Expect = 0.0 Identities = 1331/1518 (88%), Gaps = 21/1518 (1%) Strand=Plus/Plus Query 83 ATGGCTTCGTTACTTCTCACATC-GTCGAGTATGATAACCACTAGCTGTCGCTCCATGGT 141 ||||||||||||||||||||||| ||| ||||||| ||||| | | ||| | || | || Sbjct 1 ATGGCTTCGTTACTTCTCACATCTTTCG-GTATGATCACCACCACCGGTCCCACCCTTGT 59 Query 142 TCTCCGGTCAGGGTTACCCATCGGATCTTCTTTTCCCTCTCTTCGCCTGACCCGTCCATA 201 | ||||||||| ||||||||| ||||||||| ||||| | ||||||||||| || | Sbjct 60 TGTCCGGTCAGTGTTACCCATTGGATCTTCTCAGCCCTCAATCCGCCTGACCCGCCCGTG 119 Query 202 CGACAAGGCGACTCTGTTCGTCTCATGTTGCTCCGCTGAGTCCAAAAAGGTGGCAACTAG 261 | ||||| ||||| ||||| |||||||||||||| |||||||||||||||||| |||||| Sbjct 120 CAACAAGCCGACTTTGTTCATCTCATGTTGCTCCTCTGAGTCCAAAAAGGTGGTAACTAG 179 Query 262 TGCTACTGATCTCAAACCTATCATGGAACGGAGGCCGGAGTACATTCCGAACAAGCTTCC 321 ||||||||| |||||||||||| |||||||| |||| |||||||| |||||||||| ||| Sbjct 180 TGCTACTGACCTCAAACCTATCGTGGAACGGTGGCCAGAGTACATACCGAACAAGC-TCC 238 Query 322 CC-ACAAGAACTATGTGCGTGTATTAGACACGACGCTTCGTGACGGTGAACAATCTCCCG 380 || ||||||||||||| |||||| | |||||||| |||||||| || |||||| |||| | Sbjct 239 CCGACAAGAACTATGTACGTGTACTCGACACGACACTTCGTGAGGGCGAACAAGCTCCAG 298 Query 381 GTGCAGCACTTACTCCACCGCAGAAGTTAGAGATTGCCAGGCAGCTAGCTAAACTCCGAG 440 ||| | | |||||||| ||||||||| ||||||||||| |||| || ||||||||||||| Sbjct 299 GTGGATCCCTTACTCCGCCGCAGAAGCTAGAGATTGCCCGGCAACTCGCTAAACTCCGAG 358 Query 441 TAGACATCATGGAAGTTGGTTTTCCGGTGTCGTCTGAGGAAGAATTCGAAGCTATTAAAA 500 |||||||||||||||| |||||||||| ||| ||||| ||||| |||||| | |||||| Sbjct 359 TAGACATCATGGAAGTCGGTTTTCCGGGGTCATCTGATGAAGAGTTCGAAACCGTTAAAA 418 Query 501 CCATCGCCAAGACCGTGGGGAACGAGGTGGATGAGGAAACCGGTTACGTTCCTGTGATAT 560 | ||||| |||||||||||||| |||||||||| |||||| ||||| || || ||||||| Sbjct 419 CTATCGCTAAGACCGTGGGGAATGAGGTGGATGTGGAAACAGGTTATGTCCCGGTGATAT 478 Query 561 GCGGCATTGCACGATGCAAAAAGAGAGACATCGAGGCAACTTGGGAGGCACTGAAGTATG 620 | | | |||||||||| ||| |||||| | ||||| ||||| |||| ||||||| | Sbjct 479 CCACCCTCGCACGATGCATAAATAGAGACGTTGAGGCCGCTTGGAAGGCGGTGAAGTACG 538 Query 621 CGAAGAGGCCGAGGGTAATGC-TATTCACATCTACTAGTGAAATTCACATGAAATATAAG 679 |||||||||| ||| | |||| |||| |||||||||||||| ||||||||||| |||||| Sbjct 539 CGAAGAGGCCAAGGAT-ATGCATATTTACATCTACTAGTGATATTCACATGAACTATAAG 597 Query 680 TTGAAAAAGACTAAAGAAGAAGTGATCGAGATGGCCGTGAACAGTGTTAAGTACGCTAAA 739 ||||||||||||||||||||||||||||||||| || ||| ||| ||| || ||||||| Sbjct 598 TTGAAAAAGACTAAAGAAGAAGTGATCGAGATGTCCTTGAGTAGTATTAGGTTCGCTAAA 657 Query 740 AGCTTGGGCTTCAAAGACATCCAATTTGGGTGCGAAGATGGCGGCAGGACGGAGAAAGAT 799 ||||| |||||| | |||||||||||||| |||||||| ||| ||||| ||||||| || Sbjct 658 AGCTTAGGCTTCCATGACATCCAATTTGGTTGCGAAGACGGCTGCAGGTCGGAGAAGGAG 717 Query 800 TTTATATGTAAGATTCTAGGAGAATCGATAAAAGCGGGTGCAACCACGGTGGGGTTTGCG 859 ||| |||||||||||||||||||| |||||||||||||||| || ||||| | | ||| Sbjct 718 TTTGTATGTAAGATTCTAGGAGAAGCGATAAAAGCGGGTGCTACTTCGGTGTGCATCGCG 777 Query 860 GACACGGTCGGGATCAACATGCCGCAAGAATTCGGAGAACTCGTGGCCTATGTCATAGAA 919 |||||||| ||||||| |||||| || |||||||||||||||||| ||| ||||| || | Sbjct 778 GACACGGTAGGGATCACCATGCCACATGAATTCGGAGAACTCGTGACCTTTGTCAAAGCA 837 Query 920 AACACTCCAGGGGCTGATGATATTGTCTTC-GCCATTCATTGTCATAACGACCTTGGTGT 978 ||||||||||| ||||||| |||||||| | | |||||||||| |||||||||||| | Sbjct 838 AACACTCCAGGAATTGATGATGTTGTCTTCAG-CGTTCATTGTCACAACGACCTTGGTCT 896 Query 979 TGCTACCGCCAACACAATATCCGGTATATGTGCGGGAGCAAGACAAGTCGAAGTGACGAT 1038 ||||||||| |||||||| | | | ||||||| |||| |||||| ||||||| || || Sbjct 897 TGCTACCGCAAACACAATCGCTGCTGTATGTGCCGGAGTGAGACAATTCGAAGTAACAAT 956 Query 1039 CAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAAGAGGTCGTGATGGCTTTGAA 1098 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957 CAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAAGAGGTCGTGATGGCTTTGAA 1016 Query 1099 ATGTCGAGGAGAATCTCTGATGGATGGTGTTTACACAAAAATAGACTCACGCCAAATTAT 1158 ||||||||||| || ||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct 1017 ATGTCGAGGAGCATATCTTATGGATGGTGTTTACACAAGAATAGACACACGCCAAATTAT 1076 Query 1159 GGCTACAAGCAAGATGGTTCAAGAGCATACCGGCATGTATGTTCAACCACATAAGCCAAT 1218 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1077 GGCTACTAGCAAGATGGTTCAAGAGCATACCGGCTTGTATGTTCAACCACATAAGCCAAT 1136 Query 1219 AGTTGGAGACAACTGTTTTGTTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAA 1278 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1137 AGTTGGAGACAACTGTTTTGTTCATGAAAGCGGCATTCACCAGGATGGAATATTAAAAAA 1196 Query 1279 TCGAAGTACATATGAGATCTTATCACCAGAAGATGTTGGGATCGTAAAATCTG-AAAATT 1337 |||||||||||||||||| |||||||||||||||||||| ||||||||||| | |||||| Sbjct 1197 TCGAAGTACATATGAGATTTTATCACCAGAAGATGTTGGAATCGTAAAATC-GCAAAATT 1255 Query 1338 CTGGCATTGTTCTTGGAAAGCTTAGCGGACGTCATGCTGTAAAAGACCGGCTTAAAGAGT 1397 | ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||| Sbjct 1256 CAGGCATTGTTCTTGGAAAGCTTAGTGGACGTCATGCTATAAAAGACAGGCTTAAAGAGT 1315 Query 1398 TGGGATATGAAATC-AGTGATGAGAAATTCAACGACATCTTCTCACGATACAGAGAATTA 1456 |||||||||||||| | |||||||||||||||||| ||||||||||||| |||||| ||| Sbjct 1316 TGGGATATGAAATCGA-TGATGAGAAATTCAACGAAATCTTCTCACGATTCAGAGATTTA 1374 Query 1457 ACGAAGGACAAAAAGAGAATCACAGACGCTGATCTGAAGGCATTAGTGGTGAACGGTGCT 1516 || | | | || | | || |||||||||||||||||||||||||||||||||| | Sbjct 1375 ACCA-GTA------GA-ATT-ACCGACGCTGATCTGAAGGCATTAGTGGTGAACGGTGAT 1425 Query 1517 GAAATCTCATCAGAAAAATTAAACAGTAAAGGAATTAACGACCTTATGTCAAGCCCTCAG 1576 |||||| ||||||| |||| ||||||||||||||||||| ||||||||||||| ||||| Sbjct 1426 GAAATCACATCAGAGAAATCAAACAGTAAAGGAATTAACAACCTTATGTCAAGTCCTCAT 1485 Query 1577 ATTTCCGCTGTTGTATAA 1594 |||||| ||||||||||| Sbjct 1486 ATTTCCTCTGTTGTATAA 1503 > Ahg941819 jgi|Araly1|941819|scaffold_602363.1 Length=1573 Score = 1513 bits (819), Expect = 0.0 Identities = 1257/1467 (86%), Gaps = 35/1467 (2%) Strand=Plus/Plus Query 55 TCTTT-TCTCTCCTACTTTCTCTATAGTAATGGCTTCGTTACTTCTCACATCGT-CGAGT 112 ||||| | |||||||| | ||| ||||| |||||||| | |||||| ||||| | || || Sbjct 1 TCTTTCTTTCTCCTACATACTCCATAGTTATGGCTTCATCACTTCTGACATCTTCCG-GT 59 Query 113 ATGAT--A-ACCACTAGCTGTCGCTCCATGGTTCTCCGGTCAGGGTTACCC-ATCGGATC 168 ||||| | ||||| | | || | || ||||| |||||||| ||||||| || ||| Sbjct 60 ATGATCCATACCAC-CGGT-TC-CACCGTGGTTGGCCGGTCAGTGTTACCCTTTC-AATC 115 Query 169 TTCTTTTCCCTCTCTTCGCCTGACCCGTCCATACGACAAGGCGAC-TCTGTTCGTCTCAT 227 ||| | | ||||||||| || |||| ||||||| | ||| || | | | ||| |||||| Sbjct 116 TTCCCTGCACTCTCTTCGTCTCACCCATCCATACAAGAAGCCGGCATAT-TTCATCTCAT 174 Query 228 GTTGCTCCGCTG-AGTCCAAAAA-GGTGGCAACTAGTGCTACTGATCTCAAACCTATCAT 285 ||||||| ||| | |||||||| || |||||||| |||||||||||||||||| | | Sbjct 175 GTTGCTCTTCTGTA-TCCAAAAATGG-GGCAACTAATGCTACTGATCTCAAACCCGTTGT 232 Query 286 GGAACGGAGGCCGGAGTACATTCCGAACAAGCTTCCCC-ACAAGAACTATGTGCGTGTAT 344 ||||||| ||||||||||||| || ||||||| ||||| |||| |||||||||||||||| Sbjct 233 GGAACGGTGGCCGGAGTACATACCAAACAAGC-TCCCCGACAACAACTATGTGCGTGTAT 291 Query 345 TAGACACGACGCTTCGTGACGGTGAACAATCTCCCGGTGCAGCACTTACTCCACCGCAGA 404 | |||||||| || ||||| ||||||||| ||||||||| | | |||||||| ||||||| Sbjct 292 TCGACACGACACTCCGTGATGGTGAACAAGCTCCCGGTGGATCCCTTACTCCGCCGCAGA 351 Query 405 AGTTAGAGATTGCCAGGCAGCTAGCTAAACTCCGAGTAGACATCATGGAAGTTGGTTTTC 464 || ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 352 AGCTAGAGATTGCCCGGCAGCTTGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTC 411 Query 465 CGGTG-TCGTCTGAGGAAGAATTCGAAGCTATTAAAACCATCGCCAAGACCGTGGGGAAC 523 ||| | || ||||| ||||| || ||| | ||||||| ||||| |||||||||||||| Sbjct 412 CGG-GATCATCTGAAGAAGAGTTAGAAACCGTTAAAACTATCGCTAAGACCGTGGGGAAT 470 Query 524 GAGGTGGATGAGGAAACCGGTTACGTTCCTGTGATATGCGGCATTGCACGATGCAAAAAG 583 ||||||||||||||||| |||||||| || || ||||||| ||| |||||| ||||| | Sbjct 471 GAGGTGGATGAGGAAACAGGTTACGTCCCCGTAATATGCGCCATCGCACGAAGCAAACAT 530 Query 584 AGAGACATCGAGGCAACTTGGGAGGCACTGAAGTATGCGAAGAGGCCGAGGGTAATGC-T 642 |||||||| ||||| |||||||||| | ||||| ||||||||||| ||| || | | | Sbjct 531 AGAGACATTGAGGCGGCTTGGGAGGCGGTAAAGTACGCGAAGAGGCCAAGGATACT-CAT 589 Query 643 ATTCACATCTACTAGTGAAATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGT 702 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 590 ATTCACATCTACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAGGT 649 Query 703 GATCGAGATGGCCGTGAACAGTGTTAAG-TACGCTAAAAGCTTGGGCTTCAAAGACATCC 761 ||| ||||||||||||| ||| | | | | ||||||||||||||||||||||||||||| Sbjct 650 GATTGAGATGGCCGTGAGTAGTATCAGGCT-CGCTAAAAGCTTGGGCTTCAAAGACATCC 708 Query 762 AATTTGGGTGCGAAGATGGCGGCAGGACGGAGAAAGATTTTATATGTAAGATTCTAGGAG 821 |||||||||||||||||||||||||| |||| || || || |||| ||||||||||||| Sbjct 709 AATTTGGGTGCGAAGATGGCGGCAGGTCGGACAAGGAGTTCCTATGCAAGATTCTAGGAG 768 Query 822 AATCGATAAAAGCGGGTGCAACCACGGTG-GGGTTTGCGGACACGGTCGGGATCAACATG 880 || | ||||||||||||| || |||| | | || |||||||| |||||||||||| Sbjct 769 AAGCAATAAAAGCGGGTGTTACGGTGGTGAACG-TCGCAGACACGGTAGGGATCAACATG 827 Query 881 CCGCAAGAAT-TCGGAGAACTCGTGGCCTATGTCATAGAAAACACTCCAGGGGCTGATGA 939 || || |||| | ||||||||||| ||||| ||| || ||||||||| || |||||| Sbjct 828 CCACATGAATAT-GGAGAACTCGTAACCTATCTCAAAGCAAACACTCCTGGAATTGATGA 886 Query 940 TATTGTCTTC-GCCATTCATTGTCATAACGACCTTGGTGTTGCTACCGCCAACACAATAT 998 ||| |||||| | |||||||||| ||||| |||||| ||||||| |||||| |||| Sbjct 887 TATCGTCTTCAG-TGTTCATTGTCACAACGATCTTGGTCTTGCTACTGCCAACTCAATCG 945 Query 999 CCGGTATATGTGCGGGAGCAAGACAAGTCGAAGTGACGATCAACGGAATTGGTGAAAGAA 1058 |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct 946 CCGGTATACGTGCGGGAGCAAGACAAGTGGAAGTAACGATCAACGGAATTGGTGAGAGAA 1005 Query 1059 GTGGGAATGCGCCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATCTCTGA 1118 ||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||| Sbjct 1006 GTGGGAATGCGTCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGCATATGTGA 1065 Query 1119 TGGATGGTGTTTACACAAAAATAGACTCACGCCAAATTATGGCTACAAGCAAGATGGTTC 1178 | ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 1066 TCAATGGTGTTTACACAAGAATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTC 1125 Query 1179 AAGAGCATACCGGCATGTATGTTCAACCACATAAGCCAATAGTTGGAGACAACTGTTTTG 1238 ||||| | |||||| |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1126 AAGAGTACACCGGCTTGTATGTTCAACCACATAAGCCCATAGTTGGAGCCAACTGTTTTG 1185 Query 1239 TTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAATCGAAGTACATATGAGATCT 1298 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1186 TTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAATCGGAGTACATATGAGATCT 1245 Query 1299 TATCACCAGAAGATGTTGGGATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGC 1358 |||||||||||||| ||||| ||||||||||| |||| || ||| ||||||||||||||| Sbjct 1246 TATCACCAGAAGATATTGGGGTCGTAAAATCTCAAAACTCCGGCCTTGTTCTTGGAAAGC 1305 Query 1359 TTAGCGGACGTCATGCTGTAAAAGACCGGCTTAAAGAGTTGGGATATGAAATC-AGTGAT 1417 |||| |||||||||||||| ||||| ||||| || ||||||||||||||| || | |||| Sbjct 1306 TTAGTGGACGTCATGCTGTGAAAGATCGGCTGAACGAGTTGGGATATGAACTCGA-TGAT 1364 Query 1418 GAGAAATTCAACGACATCTTCTCACGATACAGAGAAT-TAACGAAGGACAAAAAGAGAAT 1476 |||||| | |||||| |||||||||| | |||||| | |||| ||| | |||||||| || Sbjct 1365 GAGAAACTGAACGACGTCTTCTCACGGTTCAGAGA-TCTAACCAAGCATAAAAAGAGGAT 1423 Query 1477 CACAGACGCTGATCTGAAGGCATTAGT 1503 ||| || |||||| ||||||| ||||| Sbjct 1424 CACGGATGCTGATATGAAGGCGTTAGT 1450 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67534004385 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5