BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G24870.1
Length=2086
Score E
Sequences producing significant alignments: (Bits) Value
Ahg489350 jgi|Araly1|489350|fgenesh2_kg.6__2484__AT5G24870.1 2817 0.0
Ahg487900 jgi|Araly1|487900|fgenesh2_kg.6__1034__AT5G10650.2 531 1e-149
> Ahg489350 jgi|Araly1|489350|fgenesh2_kg.6__2484__AT5G24870.1
Length=2055
Score = 2817 bits (1525), Expect = 0.0
Identities = 1901/2073 (92%), Gaps = 63/2073 (3%)
Strand=Plus/Plus
Query 33 CTCAACGAAACCCAAAATCAACGGCTCAGATCATTCCGACTTCTGTTTCGCCTTTGCTAC 92
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 27 CTCAACGAAACCCAAAATCAACGGATCAGATCACTCCGACTTCTGTTTCGCCTTTGCTAC 86
Query 93 GCCActtcttcttcttcttctCCGGTTTTAAATTAAAACCTCTCACAAAATTATTCGGAA 152
|||| ||||||||||||||||| || |||||||||| |||||||||||||| |
Sbjct 87 GCCA---CTTCTTCTTCTTCTCCGATTATAAATTAAAATCTCTCACAAAATTA--C---- 137
Query 153 TATTATttcttct-tcttcttcttcttcttcttcatcatcgcatctctctcacttcacgt 211
|| ||| | | | ||||||||||||||| || ||||||||||||||||||| |||||
Sbjct 138 TA--ATTCCGAATAT-TTCTTCTTCTTCTTCCTCTTCATCGCATCTCTCTCACTCCACGT 194
Query 212 tttcttcGGTGAAGAGATAGCCGCCGGAAAAAGTTATCATCTCCGGAAATTTC-GCTCTT 270
|||||||||||||||||||||| |||| ||||||||||||| ||||||||||| | | ||
Sbjct 195 TTTCTTCGGTGAAGAGATAGCCTCCGGGAAAAGTTATCATCGCCGGAAATTTCAGAT-TT 253
Query 271 TCTTTAC-GTGTTTGAGGGTGTGTTTTATGTATGGATGGATTTAAGGGTAAAAGAACATC 329
| || | |||| | ||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 254 AC-TTGCAGTGTATAAGGGTGTGTGTTATGTATGGATGGATTGAAGGGTAAAAGAACATT 312
Query 330 TAGACCGATTATGCCA-CGGAAAGCAAGTGGTCTTGTGTTACATGAGAATATGAAGAAGA 388
||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 313 TAGACCGATTATG-CAGCGGAAAGCGAGTGGTCTTGTTTTACATGAGAATATGAAGAAGA 371
Query 389 AAGATGATAAGAGTGTTGTCCCTATCTGCAGTAGAATTGGTTGCAGTTCCAGGGTTAGTT 448
|||||||||||||| |||| |||||||||||| | |||||||| ||||| ||| ||||||
Sbjct 372 AAGATGATAAGAGTCTTGTTCCTATCTGCAGTCGGATTGGTTGTAGTTCTAGGATTAGTT 431
Query 449 CCACTAAGGGAGATTTGATTGATCATAAAGCAAAAGCTACTGTGTCTTCGTTTCGATCTC 508
| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 432 CTACTAAGGGAGCTTTGATTGATCACAAAGCAAAATCTACTGTGTCTTCGTTTCGATCT- 490
Query 509 CTTT-GAGTGGAAAGGAAACCGTTGGTAGTTCATCTCGAAGTATGAGTGGATTTGGTGGT 567
||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 491 TTTTCAAATGGAAAGGAATCCGTTGGGAGTTCATCTCGAAGTATGAGTGGATTTGGTGGT 550
Query 568 ACAAAAAAGGCTTCCAAGGTT-ATTGGTAGGAGACAACTCTCTTCTCTTTTGGACATGGA 626
||||||||||||||||| ||| || |||||||||||||||| ||||||||||| |||||
Sbjct 551 ACAAAAAAGGCTTCCAAAGTTGGTT-GTAGGAGACAACTCTCGTCTCTTTTGGATATGGA 609
Query 627 TTCTTCAGAGAGCAGCAGTGTTAATGAAGACTCACCCACAAGTGAGCGT-TCCCTTCCTC 685
|||||||||||| ||||||||||||||||| |||||||| ||||||||| | |||||| |
Sbjct 610 TTCTTCAGAGAGTAGCAGTGTTAATGAAGAGTCACCCACGAGTGAGCGTGT-CCTTCCAC 668
Query 686 GTGGAAAGACAAAAGAAAGCACTATTAGTGTTCATTCTGAAAGTAGTGTCTCTGGAGAAG 745
|||||||||| ||||||||||||| | | | | | | | ||||||||||||||
Sbjct 669 GTGGAAAGACCAAAGAAAGCACTA-T-G-G-----T-T---A--A-TGTCTCTGGAGAAG 713
Query 746 TTGTGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGTAGAAGCATTCATCAGAGACCTG 805
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 714 TTGTGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGCAGAAGCATTCATCAGAGACCTG 773
Query 806 ATTTGGTCTCCCGAGATGCTCGTGTGAGTAATAGTGAGCAAAATGCAAGAGCTAGTGTGA 865
||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||
Sbjct 774 ATTTGGTCTCCCGAGATGCACGTATGGGTAATAGTGAGCAAAATGCAAGAGCTAGTGTGA 833
Query 866 ACAAGAATGGATTAAGAGACTTGAGGAACAAATCTGGTTCTGATGTTCTTCCATCTAATT 925
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 834 ACAAGAATGGATTGAGAGACTTGAGGAGCAAATCTGGTTCTGATGTTCTTCCATCTAATT 893
Query 926 CAACTCCGACAAGAAAAAGTAACATCTTTAGAAAGAAAACCTCTGATGGTGAGAGCAGCT 985
||| ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||
Sbjct 894 CAAATCCGACAAGAAAAAGTAACATATTTAGAAAGAAAAACTCTGATGGAGAGAGCAGCT 953
Query 986 CTTCGAGTAGAGGGAATAAGACGGAAGGATCAGTGGTTGGGGGAAAGAATATT-AGTTCC 1044
|||||| |||||||||||||||||||||||||||| ||||||||| |||| || ||||||
Sbjct 954 CTTCGAATAGAGGGAATAAGACGGAAGGATCAGTGTTTGGGGGAAGGAAT-TTAAGTTCC 1012
Query 1045 CCTCAGGGGAATGGCATCACCATGTCTGAACCTAGGAGGAACAGAAACT-TACCAAGTGT 1103
|||||||| |||||||||||||| |||||| |||| ||||||||||| | ||||||||||
Sbjct 1013 CCTCAGGGCAATGGCATCACCATATCTGAATCTAGAAGGAACAGAAA-TATACCAAGTGT 1071
Query 1104 TAGGGACAACAGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTTATTATGGTAGAAC 1163
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1072 TAGGGACAACAGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTAATTATGGTAGAAC 1131
Query 1164 AGGACGTGCTGGAGCGGTTGCAACACTACAAGCACCTCGGCCTCCAACA-AGAGCTGATC 1222
|||||||||||||||||||||||| |||||||| ||||||||| ||||| | ||||||||
Sbjct 1132 AGGACGTGCTGGAGCGGTTGCAACTCTACAAGCGCCTCGGCCTGCAACACA-AGCTGATC 1190
Query 1223 TCAATCCTTCTAGATCGGCAGAAGCTTCGCGTAGTCCTTTAAATAGTTACAGTAGGCCAA 1282
| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1191 TTAATCCTTCTAGATCTGCAGAAGTTTCGCGTAGTCCTTTAAATAGTTACAGTAGGCCAC 1250
Query 1283 TCAGTAGTAATGGCAGGTTACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGCCGGCC 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 TCAGTAGTAATGGCAGGTTACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGCCGGCC 1310
Query 1343 TTTCTCGCTCTTTGATGAACCGTGATACTTTCAGACGGTATAACATGAATGGAGTTGCAG 1402
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1311 TTTCTCGCTCTTTGATGAACCGTGATGGTTTCAGACGGTATAACATGAATGGAGTTGCAG 1370
Query 1403 AGGTATTGTTGGCCCTGGAAAGGATTGAGCAAGACGAAGAGCTTACATACGAGCAATTGG 1462
||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1371 AGGTATTGTTGGCACTGGAAAGGATTGAACAAGACGCAGAGCTTACATACGAGCAATTGG 1430
Query 1463 CTGTTTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAGCATAGAG 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 CTGTTTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAGCATAGAG 1490
Query 1523 ATATGAGGCTTGACATTGACAACATGTCGTATGAGGAACTGTTAGCATTAGAGGAGAAAA 1582
||||||||||||||||||| |||||||||||||||||| | |||||| | || |||||||
Sbjct 1491 ATATGAGGCTTGACATTGATAACATGTCGTATGAGGAATTATTAGCACTGGAAGAGAAAA 1550
Query 1583 TGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCTGAAAAGCCTCAAGTCAAGTA 1642
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1551 TGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCTGAAAAGCCTGAAGTCAAGTA 1610
Query 1643 TTTACCGTCCAAACGATGAATCCGACGACATTTGCCTGAACAAAGATGATGATGTCAAGT 1702
||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 1611 TTTACCGTCCAAATGATGAATCCGGCGACATGTGCCTGAACAAAGATGATGATGTAAAGT 1670
Query 1703 GCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACTTTGCCTTGCCAAC 1762
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1671 GCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGAACTTTGCCTTGCCAAC 1730
Query 1763 ATAAATACCACGTGAGCTGCGCGCAACAATGGCTACGGATGAAGAATTGGTGTCCTATAT 1822
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1731 ATAAATACCACGTGAGCTGCGCGCAACAATGGCTTCGGATGAAGAATTGGTGTCCTATTT 1790
Query 1823 GTAAAACCTCTGCAGAATCTCAGCCACATCCATTTTCATGATGATGGGATT-GCAGAGAC 1881
| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct 1791 GCAAAACCTCTGCAGAATCTCAACCACAGCCATTTTCATGATGATGGGATTTGCAGAGAC 1850
Query 1882 ATTTACCAAAGTGTTTGTGTCT--ACTTCCACTACCTTGCTCTCTATTATTTGTACATAA 1939
|| |||||||||||||| ||| |||||||| || ||||||||| ||||||||||||||
Sbjct 1851 ATC-ACCAAAGTGTTTGTCTCTCTACTTCCACCACATTGCTCTCTTTTATTTGTACATAA 1909
Query 1940 AAGGTTTTCTTTTTTACTTACACACAATTGGGAACAAA-TAGAAAATAAGATCAGGTGGA 1998
||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1910 AAGGTTT-CTTTTTTACTTACACACAATTGGGAATAAAATAGAAAATAAGATCAGGTGGA 1968
Query 1999 CAAATTA-TTGT-TTTCACCTTGTATTG-G-TTCGTAATTTCAAC-AATATTTGGTTTAA 2053
|||||| || | |||||||| |||| | || ||| | ||| ||||||||||||||
Sbjct 1969 CAAATTCCTT-TCTTTCACCT-GTATAAAGATT--TAACAT-AACCAATATTTGGTTTAA 2023
Query 2054 TTCCATATATAGTTTATATACTGTTATTGCACT 2086
|||||||| ||||| ||||||||||||||||||
Sbjct 2024 TTCCATATGTAGTT-ATATACTGTTATTGCACT 2055
> Ahg487900 jgi|Araly1|487900|fgenesh2_kg.6__1034__AT5G10650.2
Length=1965
Score = 531 bits (287), Expect = 1e-149
Identities = 1181/1590 (74%), Gaps = 152/1590 (10%)
Strand=Plus/Plus
Query 341 TGCCACGGAAAGCAAGTGGTCTTGTGTTACATGAGAATATGAAGAAGAAAGATGATAAGA 400
|||| |||||||| | ||||||| | | | ||| |||||||| |||| ||||| |||||
Sbjct 162 TGCCTCGGAAAGCTACTGGTCTTATCCTGCGTGACAATATGAACAAGACAGATGGTAAGA 221
Query 401 GTGTTGTCCCTATCTGCAGTAGAATTGGTTGCAGTTCCAGGGTTAGTTCCACTAAGGGA- 459
|| | | ||| ||||||| || ||||||| ||| | | ||| | ||| || ||| ||
Sbjct 222 CTG-T-T-CCTTTCTGCAGCCGAGTTGGTTGTAGTGCAAAGGTAACTTCTACCAAGAGAT 278
Query 460 ----GATTTGAT-T---GATC-ATAAAGCAAAAGCTACTGTGTCTTCGTTTCGATC-TCC 509
|||| | | | || | | || |||||| | || || || || ||| || |||
Sbjct 279 CCCGGATTGGCTCTACGGA-CAACAATTCAAAAGTTGCTCTGCCTCCGGTTCCCTCTTCC 337
Query 510 TTTGAGTGGAAAGGAAACCGTTGGTAGTTCATCTCGAAGT-ATGAGTGGATTTGGTGGTA 568
| | ||||||||||| ||||| ||||||||||||| | || |||||||| | | ||
Sbjct 338 TCACA-TGGAAAGGAAATTGTTGGGAGTTCATCTCGAACTCCTG-GTGGATTT-G-GATA 393
Query 569 C--AAAAAAGGCTTCCAAGGTTATTGGTAGGAGACAA-CTC-TCTTCTCTTTTGGACATG 624
| || |||| | |||| |||| | || ||| || | | || ||| ||| ||||
Sbjct 394 CTTAAGAAAGACAGCCAAAGTTACTCCCAGAAGA-AAGC-CGTCATCTAGTTTAGACACA 451
Query 625 GATTCTTCAGAGAGCAG-C-AGTGTTAATGAAGACT-CACCCACAAGTGAGCGTTCCCTT 681
|| ||||| | || || | ||| || || | || | || | ||| |||| | | |||
Sbjct 452 GAATCTTC-G-GAAAAGACTAGTATTCATTATGA-TCCAGCTGCAACAGAGCCTACACTT 508
Query 682 CCTCGTGGAAAGAC-AAAAGAAAGCACTATTAGTGTTCATTCTGAAAGTAG-TGTCTCTG 739
|| || |||||| ||||| | |||| || | ||||||| || |||| | | ||||||
Sbjct 509 CCACGCCAAAAGACTAAAAG-AGGCACAATCAATGTTCATCCTCAAAG-CGCTTTCTCTG 566
Query 740 GAGAAGT--TG-TGACAGAGGCAGGAAGCTCGAGTAGAGGAACTGGTAGAAGCATTCATC 796
||||||| || ||||| ||||||||||||| ||||||||||| | ||||| | |||||
Sbjct 567 GAGAAGTCGTGTTGACAAAGGCAGGAAGCTCAAGTAGAGGAACCAGCAGAAGTAGTCATC 626
Query 797 AG-AGACCTGATTTGGTCTCCCGAG--A---T-----G--C-TC-G--TGT-GA------ 832
|| || |||| |||| | |||||| | | | | || | | | |
Sbjct 627 AGAAG-TCTGAATTGGGCACCCGAGATACTCTGACGGGTCCTTCTGTTTCTACATCTTCT 685
Query 833 G-TAATAGTGAGCAAAATGCAAGA-GCTAGTGTGAACAAGAATGGATT-AAGAGACTTGA 889
| ||| || ||||| | || |||| || || ||| || |||| |||| | || ||||||
Sbjct 686 GATAACAGCGAGCACACTGTAAGAGGC-GGTTTGAGCAGGAATAGATTGAGGA-ACTTGA 743
Query 890 GGAACAAATCTGGT-TCTGATGTTCTTCCATCTAATTC-AACTC--CGACAAGAAA-AAG 944
|| ||| ||| || ||||||||||||||| |||| || ||||| | |||| ||| ||
Sbjct 744 GGTGCAATTCT-GTGTCTGATGTTCTTCCAACTAACTCAAACTCAGCAACAA-AAATCAG 801
Query 945 TAACATCTTTAGA-AAGAAAACCTCTGATGGTGAGAGCAGCTCTTCGAGTAGAGGGAATA 1003
| | || | | ||||||| ||||||||| ||||||||||| || || | ||| | ||
Sbjct 802 TGTGA-CTAAAAAGAAGAAAAACTCTGATGGAGAGAGCAGCTCCTCTAGCAAAGGCAGTA 860
Query 1004 AGAC----G-GAAGG-ATCAGTGGTTGGGGGAAAGAATATTAGTTCCCCTCAGGGGAATG 1057
|||| | | || | || ||| || | | ||| || || |||| || ||||
Sbjct 861 AGACTTGTGTGTTGGTACCAAAGGTAAGGAGTCA-AAT-TT-CTT---CTCATGGCAATG 914
Query 1058 GCATCACCA-TGTCTGA-ACCTAGGAGGAA-CAGAA-ACTTACCAAGTGTTAGGGACAAC 1113
|||||| || | ||||| | | || || || | ||| | |||||||| ||||||||| |
Sbjct 915 GCATCA-CAGTTTCTGATAAC-AGAAGAAATC-GAATA-GTACCAAGTATTAGGGACAGC 970
Query 1114 AGTGTTGTTTCAAGTAGTACTAGGAGATCAACTGGTTATTA-TGGTAGAACAGGACG-TG 1171
||||||| |||| || || |||||||| ||||||| || ||||||| || || |
Sbjct 971 AGTGTTGGTTCAGGTGGTGGTAGGAGAT---CTGGTTA-TATTGGTAGATCA-GA-GCAA 1024
Query 1172 C-TGGAGCGGTTGCAACACTACAAGC-ACCTCGGCCTCCAACAAGA-G-CTGA-TCT-CA 1225
| |||||| |||||| | || | || | || || | |||| | | || | || ||
Sbjct 1025 CTTGGAGCTGTTGCATC-CT-C-TGCTA-CT---TCT-CGACAA-ATGCCTCACCCTGCA 1075
Query 1226 A-TCCTTCTAGATCGGCAGAAGCTTCGC-GTAGTCCTTT--A--A-ATAGTTACAGTAGG 1278
| || || |||| || | |||| | | || ||| | | |||| |||||||||
Sbjct 1076 ACACCAACT-GATC-CCA-ATCCTTCTCTTTCGTTTTTTCCATCAGATAGATACAGTAGG 1132
Query 1279 CCAATCAGTAGTAATGGCAGGT-TACGTAGCCTGATGATGCCTGGTAGCCCCTCAGAAGC 1337
|||| |||||||| ||| | || ||| ||| | | |||||||||||||||| | |||||
Sbjct 1133 CCAAACAGTAGTACTGG-ACGTGTACATAG-C--ACGATGCCTGGTAGCCCCACGGAAGC 1188
Query 1338 CGGCCTTTCTCGCTCTTTGATGAACCGTGATACTTTCAGACGGTATAACATGAATGG-AG 1396
| || ||| ||||||| ||||||| ||| ||| || | || ||||||||||| |
Sbjct 1189 TGACCCTTCAAACTCTTTGGTGAACCGGGATGGTTTGAGTCACTACAACATGAATGGTA- 1247
Query 1397 TTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAGCAAGACGAAGAGCTTACATACGAGC 1456
|||||||||||||||||||||||||||||||||| || || |||||||||||||| ||||
Sbjct 1248 TTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAACATGATGAAGAGCTTACATATGAGC 1307
Query 1457 AATTGGCTGT-TTTAGAGACCAATCTGTTCTTAAATGGTATGAGCAGCTTCCACGATCAG 1515
|| ||||| | ||| ||||||||||| |||| || ||||||| ||| ||| ||||||||
Sbjct 1308 AACTGGCT-TCTTTGGAGACCAATCTATTCTCAAGTGGTATGTTCAGATTCTACGATCAG 1366
Query 1516 CATAGAGATATGAGGCTTGACATTGACAACATGTCGTATGAGGAACTGTTAGCATTAGAG 1575
|||||||||||||||||||||||||| |||||||| ||||||||||| |||| || | |
Sbjct 1367 CATAGAGATATGAGGCTTGACATTGATAACATGTCATATGAGGAACTACTAGCTTTGGGG 1426
Query 1576 GAGAAAATGGGTACAGTGAGCACTGCTCTAAGCGAAGAAGCGCTTCT-GAAAAGCCTCAA 1634
||||||||||||||||||||||| ||||||||||||||||| | ||| || |||||||||
Sbjct 1427 GAGAAAATGGGTACAGTGAGCACAGCTCTAAGCGAAGAAGCAC-TCTCGAGAAGCCTCAA 1485
Query 1635 GTC-AAGTATTTACCGTC-CAA-AC-GATGAATCCGACGACATTTGC-CTGAACAAAGAT 1689
| | ||| | ||| || || || |||||| ||| ||||| | |||| || ||
Sbjct 1486 G-CAAAGCACTTA---TCAGAAGACAGATGAAACCGGTTCCATTT-CTCTGAGTAAGGAA 1540
Query 1690 GATGATGTCAAGTGCAGCATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACT 1749
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1541 GATGATGTCAAGTGCAGTATTTGCCAGGAAGAGTATGTTGATGGAGATGAAGTAGGGACT 1600
Query 1750 TTGCCTTGCCAACATAAATACCACGTGAGCTGCGCGCAACAATGGCTACGGATGAAGAAT 1809
|||| || ||||||| ||||| |||||||| | ||||||||| | ||||||||||||
Sbjct 1601 ATGCCATGTCAACATATGTACCATGTGAGCTGTGTACAACAATGGTTGCGGATGAAGAAT 1660
Query 1810 TGGTGTCCTATATGTAAAACCTCTGCAGAA 1839
||||| || || || ||||||||||| |||
Sbjct 1661 TGGTGCCCAATCTGCAAAACCTCTGCGGAA 1690
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78465904700
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5