BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G37600.1 Length=1494 Score E Sequences producing significant alignments: (Bits) Value Ahg947410 jgi|Araly1|947410|scaffold_703639.1 1954 0.0 Ahg475723 jgi|Araly1|475723|fgenesh2_kg.2__853__AT1G66200.1 1247 0.0 Ahg479266 jgi|Araly1|479266|fgenesh2_kg.3__1967__AT3G17820.1 798 0.0 Ahg488515 jgi|Araly1|488515|fgenesh2_kg.6__1649__AT5G16570.1 754 0.0 > Ahg947410 jgi|Araly1|947410|scaffold_703639.1 Length=1166 Score = 1954 bits (1058), Expect = 0.0 Identities = 1130/1165 (97%), Gaps = 4/1165 (0%) Strand=Plus/Plus Query 113 ATCAAAACACGAGACAGATTTGATTCCATTTTTATTACTGTTACTATCATCCAAACCCTT 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCAAAACACGAGACAGATTTGATTCCATTTTTATTACTGTTACTATCATCCAAACCCTT 60 Query 173 GGTATTTGTAGCCATGAGTCTTGTTTCAGATCTCATCAACCTTAACCTCTCAGAC-TCCA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 61 GGTATTTGTAGCCATGAGTCTTGTTTCAGATCTCATCAACCTTAACCTCTCAGACATC-A 119 Query 232 CTGACAAAATCATTGCTGAATACATATGGGTTGGTGGTTCTGGAATGGACATGAGAAGCA 291 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 120 CTGACAAAATCATTGCTGAATACATATGGGTTGGTGGTTCTGGAATGGATATGAGAAGCA 179 Query 292 AAGCCAGGACTCTACCTGGACCAGTGACTGACCCTTCGCAGCTACCAAAGTGGAACTATG 351 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 180 AAGCCAGGACTCTACCTGGACCAGTGACTGACCCTTCTCAGCTACCAAAGTGGAACTATG 239 Query 352 ATGGTTCAAGCACAGGCCAAGCTCCTGGTGAAGACAGTGAAGTCATCTTATACCCTCAAG 411 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 ATGGTTCAAGCACTGGTCAAGCTCCTGGTGAAGACAGTGAAGTCATCTTATACCCTCAAG 299 Query 412 CCATATTCAAGGATCCTTTCCGTAGAGGAAACAACATTCTTGTCATGTGCGATGCGTACA 471 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 300 CCATATTCAAGGATCCTTTCCGTAGAGGAAACAACATTCTTGTCATGTGTGATGCTTACA 359 Query 472 CTCCCGCGGGTGAACCAATCCCGACTAACAAAAGACACGCTGCGGCTAAGGTCTTTAGCA 531 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 360 CTCCCGCGGGTGAACCAATCCCGACAAACAAAAGACACGCTGCGGCTAAGGTCTTTAGCC 419 Query 532 ACCCTGATGTTGCAGCTGAAGTGCCATGGTATGGTATTGAGCAAGAATACACTTTACTCC 591 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 420 ACCCTGATGTTGCAGCTGAAGTGCCATGGTATGGTATTGAGCAAGAGTACACTTTACTTC 479 Query 592 AGAAAGATGTGAAGTGGCCTGTTGGTTGGCCTATTGGTGGTTATCCCGGCCCTCAGGGAC 651 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 480 AGAAAGATGTGAAGTGGCCAGTTGGTTGGCCTATTGGCGGTTATCCCGGCCCTCAGGGAC 539 Query 652 CGTACTATTGCGGTATTGGAGCAGACAAATCTTTTGGCAGAGATGTTGTTGATTCTCACT 711 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 540 CGTACTATTGCGGTATTGGAGCAGACAAATCTTTTGGGAGAGATGTTGTTGATTCTCACT 599 Query 712 ACAAGGCCTGCTTATACGCTGGGATCAACATTAGTGGCATCAATGGAGAAGTCATGCCGG 771 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 600 ACAAGGCCTGCTTATACGCTGGTATCAACATTAGTGGTATCAATGGAGAAGTCATGCCGG 659 Query 772 GTCAGTGGGAGTTCCAGGTCGGTCCAGCTGTTGGTATCTCGGCTGCTGATGAAATTTGGG 831 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 660 GTCAGTGGGAGTTCCAGGTCGGTCCAGCTGTTGGTATCTCGGCCGCTGATGAAATTTGGG 719 Query 832 TCGCTCGTTACATTTTGGAGAGGATCACAGAGATTGCTGGTGTAGTGGTATCTTTTGACC 891 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 720 TCGCTCGTTACATTTTGGAGAGGATCACAGAGATTGCTGGTGTGGTGGTATCTTTCGACC 779 Query 892 CGAAACCGATTCCCGGTGACTGGAACGGTGCTGGTGCTCACTGCAACTACAGTACCAAGT 951 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 780 CGAAACCGATTCCTGGTGACTGGAATGGTGCTGGTGCTCACTGCAACTACAGTACCAAGT 839 Query 952 CAATGAGGGAAGAAGGCGGTTACGAGATCATCAAGAAAGCAATCGATAAATTGGGACTGA 1011 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| Sbjct 840 CAATGAGGGAAGAAGGGGGTTACGAGATTATCAAGAAGGCAATCGATAAATTGGGACTGA 899 Query 1012 GACACAAAGAACACATTGCTGCTTACGGTGAAGGCAATGAGCGTCGTCTCACAGGACACC 1071 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 900 GACACAAAGAACACATTGCGGCTTACGGTGAAGGCAATGAGCGTCGTCTCACTGGACACC 959 Query 1072 ACGAGACTGCTGACATCAACACTTTCCTTTGGGGTGTTGCGAACCGTGGAGCATCGATCC 1131 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 ATGAGACTGCTGACATCAACACTTTCCTTTGGGGTGTTGCGAACCGTGGAGCATCGATCC 1019 Query 1132 GAGTAGGACGTGATACGGAGAAAGAAGGGAAAGGATACTTTGAGGACAGGAGGCCAGCTT 1191 | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 GTGTAGGACGTGACACCGAGAAAGAAGGGAAAGGATACTTTGAGGACAGGAGGCCAGCTT 1079 Query 1192 CGAACATGGATCCTTACATTGTCACTTCCATGATTGCAGAGACTACAATCCTCTGGAATC 1251 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1080 CGAACATGGACCCTTACATTGTCACTTCCATGATTGCAGAGACCACAATCCTCTGGAATC 1139 Query 1252 CTTGATGATCATCAGATCAAGAAAA 1276 ||||||||||| |||||||||||| Sbjct 1140 CTTGATGATCA--AGATCAAGAAAA 1162 > Ahg475723 jgi|Araly1|475723|fgenesh2_kg.2__853__AT1G66200.1 Length=1429 Score = 1247 bits (675), Expect = 0.0 Identities = 950/1085 (88%), Gaps = 10/1085 (1%) Strand=Plus/Plus Query 177 TTTGTAGCCATGAGTCTTGTTTCAGATCTCATCAACCTTAACCTCTCAGACTCCACTGAC 236 |||| | ||||||||||| || ||||||| | |||||| ||||||||||| || ||| Sbjct 91 TTTGCAACCATGAGTCTTCTTGCAGATCTTGTTAACCTTGACCTCTCAGACAACAGTGA- 149 Query 237 AAA-ATCATTGCTGAATACATATGGGTTGGTGGTTCTGGAATGGACATGAGAAGCAAAGC 295 ||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 150 AAAGATCATCGCTGAATACATATGGGTTGGTGGTTCTGGTATAGACATGAGAAGCAAAGC 209 Query 296 CAGGACTCTACCTGGACCAGTGACTGACCCTTCGCAGCTACC-AAAGTGGAACTATGATG 354 |||||||||| | || || ||||| || || ||| | || || ||| ||||||||||||| Sbjct 210 CAGGACTCTATCAGGTCCTGTGACCGATCCATCGAAACTTCCGAAA-TGGAACTATGATG 268 Query 355 GTTCAAGCACAGGCCAAGCTCCTGGTGAAGACAGTGAAGTCATCTTATACCCTCAAGCCA 414 |||||||||| || |||||||||||| |||| |||||||| ||||||||||||||||| | Sbjct 269 GTTCAAGCACTGGTCAAGCTCCTGGTAAAGATAGTGAAGTGATCTTATACCCTCAAGCGA 328 Query 415 TATTCAAGGATCCTTTCCGTAGAGGAAACAACATTCTTGTCATGTGCGATGCGTACACTC 474 | ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||| Sbjct 329 TTTTCAAAGATCCGTTCCGTAGAGGCAACAACATTCTTGTTATGTGTGATGCTTACACTC 388 Query 475 CCGCGGGTGAACCAATCCCGACTAACAAAAGACACGCTGCGGCTAAGGTCTTTAGC-AAC 533 | ||||| || |||||||| || ||||| |||| ||||| ||| || ||||| || ||| Sbjct 389 CTGCGGGCGAGCCAATCCCTACGAACAAGCGACATGCTGCAGCTGAGATCTTT-GCTAAC 447 Query 534 CCTGATGTTGCAGCTGAAGTGCCATGGTATGGTATTGAGCAAGAATACACTTTACTCCAG 593 |||| ||||| ||||||||||||||||||||| || || |||||||||||||| | ||| Sbjct 448 CCTGCTGTTGTAGCTGAAGTGCCATGGTATGGAATCGAACAAGAATACACTTTGTTGCAG 507 Query 594 AAAGATGTGAAGTGGCCTGTTGGTTGGCCTATTGGTGGTTATCCC-GGCCCTCAGGGACC 652 || |||||||| |||||| |||| ||||| |||||||| || ||| |||||||||||||| Sbjct 508 AAGGATGTGAACTGGCCTCTTGGATGGCCCATTGGTGGCTA-CCCTGGCCCTCAGGGACC 566 Query 653 GTACTATTGCGGTATTGGAGCAGACAAATCTTTTGGCAGAGATGTTGTTGATTCTCACTA 712 ||||| ||| |||||||||| |||||||||||||| ||||| |||||||| ||||||| Sbjct 567 ATACTACTGCAGTATTGGAGCTGACAAATCTTTTGGAAGAGACATTGTTGATGCTCACTA 626 Query 713 CAAGGCCTGCTTATACGCTGGGATCAACATTAGTGGCATCAATGGAGAAGTCATGCCGGG 772 |||||| || || || ||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 627 CAAGGCTTGTTTGTATGCTGGAATCAACATCAGTGGGATCAATGGAGAAGTCATGCCGGG 686 Query 773 TCAGTGGGAGTTCCAGGTCGGTCCAGCTGTTGGTATCTCGGCTGCTGATGAAATTTGGGT 832 ||||||||||||||| ||||| ||| | || |||||||| ||| |||||||| | ||| | Sbjct 687 TCAGTGGGAGTTCCAAGTCGGCCCATCGGTCGGTATCTCAGCTTCTGATGAAGTGTGGAT 746 Query 833 CGCTCGTTACATTTTGGAGAGGATCACAGAGATTGCTGGTGTAGTGGTATCTTTTGACCC 892 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 747 CGCTCGTTACATTTTGGAGAGGATCACAGAGATTGCTGGTGTGGTTGTATCTTTTGACCC 806 Query 893 GAAACCGATTCCC-GGTGACTGGAACGGTGCTGGTGCTCACTGCAACTACAGTACCAAGT 951 |||||||| |||| ||||| |||||||| |||||||||||| |||||||||||| || | Sbjct 807 GAAACCGA-TCCCGGGTGATTGGAACGGAGCTGGTGCTCACACCAACTACAGTACTAAAT 865 Query 952 CAATGAGGGAAGAAGGCGGTTACGAGATCATCAAGAAAGCAATCGATAAATTGGGACTGA 1011 | |||||||||||||| || |||||||| |||||||| || || || || | ||||| | Sbjct 866 CGATGAGGGAAGAAGGAGGATACGAGATAATCAAGAAGGCGATTGAGAAGCTCGGACTAA 925 Query 1012 GACACAAAGAACACATTGCTGCTTACGGTGAAGGCAATGAGCGTCGTCTCACAGGACACC 1071 ||||||| ||||||||| | |||||||||||||| || ||||| |||||||| ||||||| Sbjct 926 GACACAAGGAACACATTTCCGCTTACGGTGAAGGAAACGAGCGCCGTCTCACGGGACACC 985 Query 1072 ACGAGACTGCTGACATCAACACTTTCCTTTGGGGTGTTGCGAACCGTGGAGCATCGATCC 1131 | || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 ATGAAACCGCTGACATCAACACTTTCCTTTGGGGTGTTGCGAACCGTGGAGCATCGATCC 1045 Query 1132 GAGTAGGACGTGATACGGAGAAAGAAGGGAAAGGATACTTTGAGGACAGGAGGCCAGCTT 1191 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1046 GAGTAGGACGCGATACCGAGAAAGAAGGGAAAGGATACTTTGAGGATAGGAGGCCAGCTT 1105 Query 1192 CGAACATGGATCCTTACATTGTCACTTCCATGATTGCAGAGACTACAATCCTCTGGAATC 1251 | |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| | Sbjct 1106 CAAACATGGACCCTTACATTGTTACTTCCATGATTGCAGAGACTACACTCCTCTGGAAAC 1165 Query 1252 CTTGA 1256 ||||| Sbjct 1166 CTTGA 1170 > Ahg479266 jgi|Araly1|479266|fgenesh2_kg.3__1967__AT3G17820.1 Length=1270 Score = 798 bits (432), Expect = 0.0 Identities = 862/1067 (81%), Gaps = 40/1067 (4%) Strand=Plus/Plus Query 198 TCAGATCTCATCAACCTTAACCTCTCAGACTCCACTGACAAAATCATTGCTGAATACATA 257 ||||||||| | ||||| |||||||| ||| |||| || |||||||| || ||||||||| Sbjct 94 TCAGATCTCGTTAACCTCAACCTCTCCGACGCCACCGAAAAAATCATCGCCGAATACATA 153 Query 258 TGGGTTGGTGGTTCTGGAATGGACATGAGAAGCAAAGCCAGGACTCTACCTGGACCAGTG 317 ||| | ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 154 TGGATCGGTGGATCTGGAATGGACATCAGAAGCAAAGCCAGGACACTACCAGGACCAGTC 213 Query 318 ACTGACCCTTCGCAGC-TACCAAAGTGGAACTATGATGGTTCAAGCACAGGCCAAGCT-C 375 ||||| || || ||| | ||||| |||||||| || || || ||||| || || ||| | Sbjct 214 ACTGATCCATCAAAGCTTCCCAAA-TGGAACTACGACGGATCCAGCACCGGTCAGGCTGC 272 Query 376 CTGGTGAAGACAGTGAAGTCA-TCTTATACCCTCAAGCCATATTCAAGGATCCTTTCCGT 434 | || |||||||||||||||| || |||||||||| || |||||||||||||| ||| | Sbjct 273 C-GGAGAAGACAGTGAAGTCATTC-TATACCCTCAGGCGATATTCAAGGATCCATTCAGG 330 Query 435 AGAGGAAACAACATTCTTGTCATGTGCGATGCGTACACTCCCGCGGGTGAACCAATCCCG 494 | ||| |||||||| || || ||||| ||||| ||||| || || ||||| ||||| || Sbjct 331 AAAGGCAACAACATCCTGGTGATGTGTGATGCTTACACACCAGCTGGTGATCCAATTCCA 390 Query 495 ACTAACAAAAGACAC-GCTGCGGCTAAGGTCTTTAGCAACCCTGATGTTGCAGCTGAAGT 553 || ||||| || ||| | || |||||| |||| ||| |||| | ||||| |||| | Sbjct 391 ACCAACAAGAGGCACAAC-GCTGCTAAGATCTTCAGCCACCCCAACGTTGCCTCTGAGGA 449 Query 554 GCCATGGTATGGTATTGAGCAAGAATACACTTT-ACTCCAGAAA-GATGTGAAGTGGCCT 611 ||| |||||||| |||||||||||||||||||| | | || ||| || ||||| ||||| Sbjct 450 GCCTTGGTATGGAATTGAGCAAGAATACACTTTGA-TGCA-AAAGGACGTGAACTGGCCA 507 Query 612 GTTGGTTGGCCTATTGGTGGTTATCCC-GGCCCTCAGGGACCGTACTATTGCGGTATTGG 670 ||||||||||| ||||||||| |||| |||||||||||||| ||||| || ||| | || Sbjct 508 ATTGGTTGGCCTGTTGGTGGTT-TCCCTGGCCCTCAGGGACCTTACTACTGTGGTGTGGG 566 Query 671 AGCAGACAAATCTTTTGG-CAGAGATGTTGTTGATTCTCACTACAAGGCCTGCT-TATAC 728 ||| |||||| | |||| | | || |||| ||| | |||||||| ||||| | | ||| Sbjct 567 AGCTGACAAAGCCATTGGTC-GTGACATTGTGGATGCACACTACAAAGCCTG-TATTTAC 624 Query 729 GCTGGGATCAACATTAGTGGCATCAATGGAGAAGTCATGCCGGGTCAGTGGGAGTTCCAG 788 || || || |||| ||| ||||||||||||||||||| || |||||||||||||| Sbjct 625 GCCGGTATTGGCATTTCTGGTGTCAATGGAGAAGTCATGCCTGGCCAGTGGGAGTTCCAA 684 Query 789 GTCGGTCCAGCTGTTGGTATCTCG-GCTGCTGATGAAATTTGGGTCGCTCGTTACATTTT 847 ||||| || | || ||||| | | |||| |||| || | ||||| ||||| ||| || | Sbjct 685 GTCGGCCCTGTTGAGGGTAT-TGGTGCTGGTGATCAAGTCTGGGTTGCTCGATACCTTCT 743 Query 848 GGAGAGGATCACAGAGAT-TGCTGGTGT-AGTGGT-ATCTTTTGACCCGAAACCGATTCC 904 ||||||||||| ||||| | ||||||| | | || | | || ||||| ||||| | ||| Sbjct 744 CGAGAGGATCACTGAGATCT-CTGGTGTAAAT-GTCAGC-TTCGACCCAAAACC-AGTCC 799 Query 905 C-GGTGACTGGAACGGTGCTGGTGCTCACTGCAACTACAGTACCAAGTCAATGAGGGAA- 962 | ||||| |||||||| ||||| |||||||||||||||||||| ||| |||||| |||| Sbjct 800 CGGGTGATTGGAACGGAGCTGGAGCTCACTGCAACTACAGTACTAAGACAATGA-GGAAC 858 Query 963 GAAGGCGG-TTACG-AGATCATCAAGAAAGCAATCGATAA-ATTGGGACTGAGACACAAA 1019 || || || ||| | || | ||||||||||| || | || || | |||| ||||||| Sbjct 859 GATGGAGGATTA-GAAG-TGATCAAGAAAGCGATAGGGAAGCTTCAG-CTGAAACACAAA 915 Query 1020 GAACACATTGCTGCTTACGGTGAAGGCAATGAGCGTCGTCTCACAGGACACCACGAGACT 1079 ||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||| || Sbjct 916 GAACACATTGCTGCTTACGGTGAAGGCAACGAGCGTCGTCTCACTGGAAAGCACGAAACC 975 Query 1080 GCTGACATCAACACTTTC-CTTTGGGGTGTTGCGAACCGTGGAGCATC-GATCCGAGTAG 1137 || ||||||||||||||| ||| |||| || || |||||||||||||| | | || | | Sbjct 976 GCAGACATCAACACTTTCTCTT-GGGGAGTCGCAAACCGTGGAGCATCCGTTA-GAATTG 1033 Query 1138 GACGTGATACGGAGAAAGAAGGGAAAGGATACTTTGAGGACAGGAGGCCAGCTTCGAACA 1197 ||||||| || ||||||||||| ||||| ||||| |||||| | ||||||||||| |||| Sbjct 1034 GACGTGACACTGAGAAAGAAGGTAAAGGTTACTTCGAGGACCGAAGGCCAGCTTCTAACA 1093 Query 1198 TGGATCCTTACATTGTCACTTCCATGATTGCAGAGACTACAATCCTC 1244 |||||||||| |||||||||||||||| || || || || |||||| Sbjct 1094 TGGATCCTTATGTTGTCACTTCCATGATCGCTGAAACCACCATCCTC 1140 > Ahg488515 jgi|Araly1|488515|fgenesh2_kg.6__1649__AT5G16570.1 Length=1229 Score = 754 bits (408), Expect = 0.0 Identities = 843/1053 (80%), Gaps = 30/1053 (3%) Strand=Plus/Plus Query 219 CTCTCAGACTCCACTGACAAAATCATTGCTGAATACATATGGGTTGGTGGTTCTGGAATG 278 ||||| || ||||||||| | ||||| || || ||||||||| ||||||| || || || Sbjct 71 CTCTCCGATTCCACTGACCAGATCATCGCCGAGTACATATGGATTGGTGGATCGGGCTTG 130 Query 279 GACATGAGAAGCAAAGCCAGGACTCTACCTGGACCAGTGACTGACCCTTCGCAGCTACC- 337 || |||||||||||||| |||||| | || ||||||||||| || || ||| || |||| Sbjct 131 GATATGAGAAGCAAAGCAAGGACTTTGCCAGGACCAGTGACGGATCCATCGGAGTTACCG 190 Query 338 AAAGTGGAACTATGATGGTTCAAGCACAGGCCAAGCTCCTGGTGAAGACAGTGAAGTCAT 397 ||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct 191 AAA-TGGAACTACGACGGTTCAAGCACCGGCCAAGCTCCCGGTGATGACAGTGAAGTCAT 249 Query 398 CTTATACCCTCAAGCCATATTCAAGGATCCTTTCCGTAGAGGAAACAACATTCTTGTCAT 457 | | ||||||||||| || ||||| || || ||| | ||||| |||||||| ||||| || Sbjct 250 CATCTACCCTCAAGCTATCTTCAAAGACCCCTTCAGAAGAGGCAACAACATCCTTGTGAT 309 Query 458 GTGCGATGCGTACACTCCCGCGGGTGAACCAATCCCGACTAACAAAAGACACGCTGCGGC 517 ||| || || || || || || || || || || ||||| |||||||| || || || || Sbjct 310 GTGTGACGCATATACACCTGCCGGAGAGCCGATTCCGACGAACAAAAGGCATGCGGCCGC 369 Query 518 TAAGGTCTTTAGCAACCCTGA-TGTTGCAGCTGAAGTGCCATGGTATGGTATTGAGCAAG 576 |||| |||||||| ||||| | ||||| || |||| ||||||| || |||||||||| Sbjct 370 TAAGATCTTTAGCGACCCT-AGTGTTGTTGCCGAAGAAACATGGTACGGAATTGAGCAAG 428 Query 577 AATACACTTTACTCCAGAAA-GATGTGAAGTGGCCTGTTGGTTGGCCTATTGGTGGTTAT 635 | |||||||| || || ||| ||| | |||||||| || |||||||| | || |||| | Sbjct 429 AGTACACTTTGCTGCA-AAAGGATATTAAGTGGCCGGTAGGTTGGCCGGTCGGCGGTT-T 486 Query 636 CCC-GGCCCTCAGGGACCGTACTATTGCGGTA-TTGGAGCAGACAAATCTTTTGGCAGAG 693 ||| || ||||||||||||||||| || || | |||||||||||||| | ||||| |||| Sbjct 487 CCCAGGTCCTCAGGGACCGTACTACTGTGG-AGTTGGAGCAGACAAAGCCTTTGGAAGAG 545 Query 694 ATGTTGTTGATTCTCACTACAAGGCCTG-CTTATACGCTGGGATCAACATTAGTGGCATC 752 | | || |||||||| ||||| || || ||| ||||| || ||| | | ||||| | | Sbjct 546 ACATCGTAGATTCTCATTACAAAGCTTGTCTT-TACGCCGGAATCGATGTCAGTGG-AAC 603 Query 753 -AATGGAGAAGTCATGCCGGGTCAGTGGGAGTTCCAGGTCGGT-CCAGCTGTTGGTATCT 810 || || ||||| ||||| || |||||||||||||| || ||| ||| | ||||| ||| Sbjct 604 TAACGGCGAAGTGATGCCCGGCCAGTGGGAGTTCCAAGTTGGTCCCA-CCGTTGGAATCG 662 Query 811 CGGCTGCTGATGAAATTTGGGTCGCTCGTTACAT-TTTGGAGAGGATCACAGAGATT-GC 868 | || || ||| | | ||||||||||||||||| || ||||||||||||| ||| || Sbjct 663 CTGCCGCAGATCAGGTCTGGGTCGCTCGTTACATCCTT-CAGAGGATCACAGA-ATTGGC 720 Query 869 TGGTGTAGTGGTATCTTTTGACCCGAAACCGATTCCCGGTGACTGGAACGGTGCTGGTGC 928 ||| || || | ||| ||||||| ||||| ||||| || || ||||| ||||| || || Sbjct 721 TGGAGTTGTTCTGTCTCTTGACCCTAAACCAATTCCGGGAGATTGGAATGGTGCAGGGGC 780 Query 929 TCACTGC-AACTACAGTACCAAGTCAATGAGGGAAGAAGGCGGTTACGAGATCATCAAGA 987 ||| | || |||||||| ||||| ||||| ||||| || || |||||| |||| |||| Sbjct 781 ACAC-ACAAATTACAGTACGAAGTCGATGAGAGAAGATGGAGGGTACGAGGTCATAAAGA 839 Query 988 AAGCAATCGATAA-ATTGGGACTGAGACACAAAGAACACATTGCTGCTTACGGTGAAGGC 1046 |||| || || || || ||| || | ||||| ||||||||||||||||| ||||||||| Sbjct 840 AAGCGATAGAGAAGCTT-GGATTGCGTCACAAGGAACACATTGCTGCTTATGGTGAAGGC 898 Query 1047 AATGAGCGTCGTCTCACAGGACACCACGAGACTGCTGACATCAACACTTTCCTT-TGGGG 1105 ||||||||||||||||||||| | || ||||| || || |||||||||||| || ||||| Sbjct 899 AATGAGCGTCGTCTCACAGGAAAACATGAGACCGCCGATATCAACACTTTC-TTATGGGG 957 Query 1106 TGTTGCGAACCGTGGAGCATCGATCCGAGTAGGACGTGATACGGAGAAAGAAGGGAAAGG 1165 ||| || ||||| || |||||||| | || || ||||| || ||||| | || ||||| Sbjct 958 TGTGGCAAACCGAGGGGCATCGATTAGGGTTGGGCGTGACACTGAGAAGGCTGGAAAAGG 1017 Query 1166 ATACTTTGAGGA-CAGGAGGCCAGCTTCGAACATGGATCCTTACATTGTCACTTCCATGA 1224 ||||||||| || | | |||||||||||||||||||||||||||| ||| || ||||||| Sbjct 1018 ATACTTTGAAGATC-GTAGGCCAGCTTCGAACATGGATCCTTACACTGTAACCTCCATGA 1076 Query 1225 TTGCAGAGA-CTACAATCCTCTGGAATCCTTGA 1256 |||| || | | |||||||| ||||| || ||| Sbjct 1077 TTGCTGA-ATCCACAATCCTTTGGAAACCATGA 1108 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55916479660 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5