BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G38680.1
Length=1074
Score E
Sequences producing significant alignments: (Bits) Value
Ahg330600 jgi|Araly1|330600|fgenesh1_pm.C_scaffold_7002827 1170 0.0
Ahg928670 jgi|Araly1|928670|scaffold_301127.1 375 3e-103
Ahg929436 jgi|Araly1|929436|scaffold_301893.1 231 6e-60
Ahg330601 jgi|Araly1|330601|fgenesh1_pm.C_scaffold_7002828 219 5e-56
Ahg338371 jgi|Araly1|338371|fgenesh1_pg.C_scaffold_2000470 159 3e-38
Ahg484253 jgi|Araly1|484253|fgenesh2_kg.5__245__AT2G03460.1 147 2e-34
> Ahg330600 jgi|Araly1|330600|fgenesh1_pm.C_scaffold_7002827
Length=1083
Score = 1170 bits (633), Expect = 0.0
Identities = 954/1101 (87%), Gaps = 53/1101 (5%)
Strand=Plus/Plus
Query 1 ATGTCGTCCCCGGAAAAGTTTTCGCCAGCGCCGGAATCGAACTCAAATCCGTCACTTCCC 60
|||||||| ||||||||| | ||||| ||||||||||||||| |||||||||||||||||
Sbjct 1 ATGTCGTCTCCGGAAAAGCTGTCGCCGGCGCCGGAATCGAACCCAAATCCGTCACTTCCC 60
Query 61 GATGCTTTGATAATAAGCTGCATCGCACGAGTCTCAAGATTGTATTATCCGATTCTCTCC 120
||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 61 GATGCGTTGCTAATAAGCTGTATCGCACGAGTCTCAAGATTGTATTATCCGACTCTCTCC 120
Query 121 TTTGTCTCCAAGAGCTTTCGATCTCTCCTAGCTTCACCGGAGCTTTACAAGGAACGGTCA 180
|||||||||| |||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 121 CTTGTCTCCAAAAGCTTTCGATCTCTCCTAGCTTCACCGGAGCTTTACAAGGCCCGATTA 180
Query 181 CTCTTGAACCGCACCGAGGGTTGTCTATATGTATGCTTATA-CTTAAATCCTTTTGAGAG 239
|||||| ||||||||||| ||||||| |||||||||||| | | ||| ||||| |||||
Sbjct 181 CTCTTGGACCGCACCGAGAGTTGTCTCTATGTATGCTTAAAGC-TAAGTCCTTCTGAGAA 239
Query 240 CCCTAGCTGGTTTACTCTCTGCTTGAAACCTGATCAAGCCCTATCTTCTGAAACAAGTAA 299
|||||||||||| ||||||||| ||||||| ||| || ||||| ||| ||| ||||||||
Sbjct 240 CCCTAGCTGGTTCACTCTCTGCCTGAAACCCGATGAAACCCTAACTTATGACACAAGTAA 299
Query 300 TAAGAAGAAGTCAAGTGGGTATGTTTTGGCTACAGTATCAATTCCACATCCTCGTCTTGT 359
|||||| |||||||||| ||||||||||||| ||| ||||||||||| ||| || |||
Sbjct 300 TAAGAAAAAGTCAAGTGACTATGTTTTGGCTAAAGTCCCAATTCCACATTCTCCTCCTGT 359
Query 360 GCAACGTTCCAGTCTCGTGGCGGTTGGTTCT-A-A--T-----A-T--C-----TA-C-A 400
| || |||| |||||||||| |||||||||| | | | | | | || | |
Sbjct 360 GAAAAGTTCGAGTCTCGTGGTGGTTGGTTCTAATATCTACAACATTGGCTGTAATATCTA 419
Query 401 -A-CATTGGCAGATCCATATCACCTTACTCTAGTGTCTCGATTTTTGATTGCCGGTCTCA 458
| |||||||||||||| |||||||||||||| || || ||||||||||||||||||||
Sbjct 420 CAGCATTGGCAGATCCAGATCACCTTACTCTAACGTTTCTATTTTTGATTGCCGGTCTCA 479
Query 459 CACGTGGCGCGAGGCTCCAAGCTTGCCAGTGGAGCTAGTTGAAGTTTCTGCTGGCGTCCT 518
||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
Sbjct 480 CACATGGCGCGAGGCTCCAAGCTTGCCAGTGGAGCTATTTGCAGTTTCTGCTGGCGTCGT 539
Query 519 TGACGGAAAGATATATGTAGCCGGAAGTTGCAAAGATGGA-GATTCTCT-TAACTTGAAG 576
||| ||||||||||||||| || |||| ||||||||| || |||||| | ||||||||||
Sbjct 540 TGATGGAAAGATATATGTAACCAGAAGCTGCAAAGAT-GACGATTCT-TATAACTTGAAG 597
Query 577 AACACTTTCGAGGTGTTCGACACAAAAACACAAGTTTGGGATCATGTACCTATCCCTTAC 636
||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct 598 AACACTTTCGAGGTGTTCGACACAAAAACACAAGTTTGGGATCATGTGCCAAGCCCTTAC 657
Query 637 AACGAAACAAAACACAACAT-TTACTCCAAAAGCTTATGTATTGACGAAAAGTGGTATGT 695
| | |||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||
Sbjct 658 AGCCAAACAAAACACAAC-TCTTACTCCAAAAGCCTATGTATTGACGAAAAGTGGTACGT 716
Query 696 AGGGG-CTAAGAGAAAGGTGGTTTCTTACAATCCCAAGAAAGGTATATGGGACCTTGTTG 754
|| | |||| |||||||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct 717 -GGTGACTAAAAGAAAGGTGGTTGCTTACAATCCCAAGAAAGGTAAATGGGACCATGTTG 775
Query 755 AATCAGAGATGTGTAGTTATAAGTCTTCATATGATTATTGTGAGATAGAGAACGTTTTGT 814
||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct 776 AATCAGAGATGTGTAGTTACAAGTCTTCATATGGTTATTGTGTGATAGAGAACGTTTTGT 835
Query 815 ACTCTGTCGAAAAAACATGGCGTGGCACTGTTTTCAGATGGTATGACACTGAGCTAGGAC 874
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 836 ACTCTGTGGAAAAAACATGGCGTGGCACTGATTTCAGATGGTATGACACTGAGCTAAGAC 895
Query 875 GGTGGAGAAA-GTTGGAGGGTTTG-A-A-TATGCCTTATAGTGGGACTGGTGACAGAGGC 930
||||||||| || | |||||||| | | |||| ||||| ||||| || | |
Sbjct 896 AGTGGAGAAAAGT-GAAGGGTTTGGAGAATATGACTTATGGTGGGTCT----A-A----- 944
Query 931 GGTAAGAAGATGATTTGGTGTGCGGTGATTACGCTTGAAAGGCGCAAAAAT-AGTGGAAT 989
||||| || | |||||||| ||||||||||||||||||||||||||| | || |||
Sbjct 945 --TAAGA---TGCTCTGGTGTGCAGTGATTACGCTTGAAAGGCGCAAAAATCA-TGAAAT 998
Query 990 TTGGGGAAACGTTGAGTGGTTTGCTCATGTGCTTACAGTTCCTAAAACATTTGTTTTCCA 1049
||||||||| || |||||||||| ||||||||| ||||| |||| ||||| |||||| |
Sbjct 999 TTGGGGAAAAGTCGAGTGGTTTGATCATGTGCTAACAGTCCCTATAACATGTGTTTTAGA 1058
Query 1050 AAAGTTTCTTGCTGCTACTGT 1070
|||| |||||| |||||||||
Sbjct 1059 AAAGGTTCTTGTTGCTACTGT 1079
> Ahg928670 jgi|Araly1|928670|scaffold_301127.1
Length=1230
Score = 375 bits (203), Expect = 3e-103
Identities = 618/810 (76%), Gaps = 61/810 (8%)
Strand=Plus/Plus
Query 44 CAAATCCGTCACTTCCCGATGCTTTGATAATAAGC-TGCATCGCACGAGTCTCAAGATTG 102
|||||||||||||||| |||| |||| || | || | ||||||||| |||||||| |||
Sbjct 106 CAAATCCGTCACTTCCGGATGATTTGGTATTGCGCAT-CATCGCACGCGTCTCAAGGTTG 164
Query 103 TATTATCCGATTCTCTC-CTTTGTCTCCAAGAGCTTTCGATCTCTCCTAGCTTCACCGGA 161
|| ||||| | |||||| | |||| |||||||| ||||||||||||||||||||||||||
Sbjct 165 TACTATCCAACTCTCTCAC-TTGTTTCCAAGAGGTTTCGATCTCTCCTAGCTTCACCGGA 223
Query 162 GCTTTACAAGGA-ACGGTCACTCTTGAACCGCACCGAGGGTTGTCTATATGTATGCTTAT 220
||||||||||| | |||| |||| | || ||| ||| ||||||| ||||| ||||||
Sbjct 224 GCTTTACAAGGCCA-GGTCGCTCTCGGGCCACACTGAGAGTTGTCTCTATGTGTGCTTAC 282
Query 221 ACTTAAATCCTT-TTGAGAGCCCTAGCTGGTTTACTCTCTGCTTGAAACCTGATCAAGCC 279
| | |||| || | | ||||||| || |||||| ||| || |||||| ||
Sbjct 283 AGTGCTGTCCTGGTT-AT--C----GCTGGTTCACCCTCTGCCGGAAGCCAGATCAAACC 335
Query 280 CTATCTTCTGAAACAAGTAATAAGAAGAAGTCAAGTGGGTATGTTTTGGCTACAGTATCA 339
||||| | | || | ||| ||||||||||||||| ||||||||||| |||||| |
Sbjct 336 CTATCCAATTACACCACTAA---GAAGAAGTCAAGTGGATATGTTTTGGCAACAGTACCG 392
Query 340 ATTCCACA-TCCTCGTCTTGTGCAACGTTCC-AGTCTCGTGGCGGTTGGTTCTAATATCT 397
||||| || | || | | | | || | |||||||||||||||||||||||||| |
Sbjct 393 ATTCC-CAGTTTTCAAAAAGGG-AGCTTTTCGAGTCTCGTGGCGGTTGGTTCTAATATTT 450
Query 398 ACAACATTGGCAGATCCA--TATCAC---C-TTACTCTAGTGTCTCGATTTTTGATTGCC 451
| |||||||| |||||| || ||| | || || ||| ||||||||||| |||||||
Sbjct 451 ATAACATTGGGGGATCCAACTACCACGGGCCTTCCTATAGCGTCTCGATTTTGGATTGCC 510
Query 452 GGTCTCACACGTGGCGCGAGGCTCCAAGCTTGCCAGTGGAGCTAGT-TGAAGTTTCTGCT 510
||||||| |||||||| ||||||||||| |||| ||||| | | | || ||||||||
Sbjct 511 GGTCTCATACGTGGCGTGAGGCTCCAAGATTGCGTGTGGAACAACTGTGTC-TTTCTGCT 569
Query 511 GGCGTCCTTGA-CGGAAAGATATATGTAGCCGGAAGTTGCAAAGATGGAGATTCTC-TTA 568
| |||||||| || ||||||||||||||| ||| | | ||| ||| | ||||| ||
Sbjct 570 AGTGTCCTTGATCG-AAAGATATATGTAGCAGGATGCTACAACGATAGTGATTCAAATT- 627
Query 569 ACTT-GAAGAACA-CTTTCGAGGTGTTCGACACAAAAACACAAGTTTGGGAT-CATGTA- 624
||| ||||||| ||| |||||||||||||||||||||||| |||||||| | || |
Sbjct 628 -CTTTGAAGAACTTCTTG-GAGGTGTTCGACACAAAAACACAAATTTGGGATAC-TG-AG 683
Query 625 CCTATCCCTTACAACGAAACAAAACACAACATT-T--ACTCCAAAAGCT-TATGTATTGA 680
|| ||| ||| || || | || | ||||| || | ||||||||||| | ||||||||
Sbjct 684 CCCATCGCTTGCAGCGGGAGAATAGACAACTTTCTTTACTCCAAAAGCACT-TGTATTGA 742
Query 681 CGAAAAGTGGTATGTAGGGG-CT-AAGAGAAAGGTGGT--TT-CTTACAATCCCAAGAAA 735
|| ||||| | || || | || || ||| ||| ||| || ||||| || ||||||||
Sbjct 743 CGGAAAGTTCCACGT-GGTGACTGAA-AGAGAGGGGGTGATTGCTTACGATTCCAAGAAA 800
Query 736 GGTATATGGGACCTTGT-TGAATCAGAGATGTGTAGTTATA--AGTC-TTCATATGATTA 791
|||| ||||||| | || | || || | |||| |||| | | |||| || ||
Sbjct 801 GGTAGATGGGACAG-GACTGGA-CAAAGTT-TGTA-TTATCTTATTTATTCAAATTCTTT 856
Query 792 TTGTGAGATAGAGAACGTTTTGTACTCTGT 821
||| ||||||||||| |||||||||| |||
Sbjct 857 TTGCGAGATAGAGAATGTTTTGTACTTTGT 886
> Ahg929436 jgi|Araly1|929436|scaffold_301893.1
Length=979
Score = 231 bits (125), Expect = 6e-60
Identities = 371/483 (77%), Gaps = 44/483 (9%)
Strand=Plus/Plus
Query 294 AAGTAATAAGAAGAAGTCAAGTGGGTATGTTTTGGCTACAGTATCAATTCCAC-ATCCTC 352
||| || ||||||||||||||||||||||||||||||| ||| ||||||| | || |||
Sbjct 27 AAG-AAGAAGAAGAAGTCAAGTGGGTATGTTTTGGCTAGAGTCCCAATTCC-CGATTCTC 84
Query 353 GTCT-TGTGCAACGTTC-CAG-TCTCGTGGCGGTTGGTTCTAATATCTACAACATTGGCA 409
| | |||||| | ||| | | ||| || ||||||||||||||||||||||||||||||
Sbjct 85 CT-TGTGTGCA-C-TTCTCGGGTCTTGTAGCGGTTGGTTCTAATATCTACAACATTGGC- 140
Query 410 GA-TCCATA--TCA--C-CT-TACTCTAGTGTCTC-GATTTTTGATTGCCGGTCTCACAC 461
|| |||||| | | || | ||| || ||||| | || | |||||||||||||||||
Sbjct 141 GAATCCATAAATTTTTCGCTCTCCTCGAGCGTCTCTG-TTCTGGATTGCCGGTCTCACAC 199
Query 462 GTGGCGCGAGGCTCCAAGCTTGCCAGTGGAGCTAGTTGAAGTTTCTGCTGGCGTCCTTGA 521
|||||||||||||||||||||||| ||| ||||| || | | |||||| ||||| ||||
Sbjct 200 GTGGCGCGAGGCTCCAAGCTTGCCGGTGAAGCTAATTTCACTCTCTGCTAGCGTCTTTGA 259
Query 522 CGGAAAGATATATGT---AG---CCGGAAGTTGC-A-AA-GATGGA-GATTCTCT-TAAC 570
||||||||||||| || ||| | | | | || |||| | ||| | |||
Sbjct 260 TAGAAAGATATATGTCGCAGGGGCCGCAGGGCGGTACAACGATGTCCG-TTC-CGATAAT 317
Query 571 TTGAAGAACACTTTCGAGGTGTTCGACACAAAAACACAAGTTTGGGATCATGTA-CCTAT 629
||||||| | | || || ||||||||||||||||||||| |||||||| || | || ||
Sbjct 318 TTGAAGACCTCGTTGGAAGTGTTCGACACAAAAACACAAACTTGGGATCCTG-AGCCCAT 376
Query 630 CCCTTACAACGAAACAAAACACAACATTTACTC-CAAAAGCTTATGTATTGACGAAAAGT 688
||||| || || | |||| ||| | |||| | || |||| |||| ||||||| |||||
Sbjct 377 CCCTTGCAGTGAGATAAAAGACAGC-TTTAATTGCAGAAGCATATGGATTGACGGAAAGT 435
Query 689 GGTATGTAGGGG-CTAAGAGAA-AGGTGGTTT-CTTACAA-TCCCAAGAAAGGTATATGG 744
|||| || | || | | || | || ||| ||||||| ||| ||| |||||| ||||
Sbjct 436 TCCATGT-GGCGACTCACA-AAGATTTG-TTTGCTTACAAATCC-AAGGAAGGTAGATGG 491
Query 745 GAC 747
|||
Sbjct 492 GAC 494
> Ahg330601 jgi|Araly1|330601|fgenesh1_pm.C_scaffold_7002828
Length=879
Score = 219 bits (118), Expect = 5e-56
Identities = 163/185 (88%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 29 CGCCGGAATCGAACTCAAATCCGTCACTTCCCGATGCTTTGATAATAAGCTGCATCGCAC 88
||||| | |||||| | ||||||||||||||||||| ||||||| | |||||| ||||||
Sbjct 5 CGCCGCAGTCGAACCCGAATCCGTCACTTCCCGATGATTTGATATTGAGCTGCGTCGCAC 64
Query 89 GAGTCTCAAGATTGTATTATCCGATTCTCTCCTTTGTCTCCAAGAGCTTTCGATCTCTCC 148
| ||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||
Sbjct 65 GGGTCTCAAAATTGTATTATCCGACTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCC 124
Query 149 TAGCTTCACCGGAGCTTTACAAGGAACGG-TCACTCTTGAACCGCACCGAGGGTTGTCTA 207
|||||||||| ||| |||||||| | | | ||||||||| ||||||||||| |||||||
Sbjct 125 TAGCTTCACCAGAGATTTACAAG-ACCCGATCACTCTTGGACCGCACCGAGAGTTGTCTC 183
Query 208 TATGT 212
|||||
Sbjct 184 TATGT 188
> Ahg338371 jgi|Araly1|338371|fgenesh1_pg.C_scaffold_2000470
Length=1086
Score = 159 bits (86), Expect = 3e-38
Identities = 352/473 (74%), Gaps = 47/473 (10%)
Strand=Plus/Plus
Query 52 TCACTTCCCGATGCTTTGATAATAAGCT-GCATCGCACGAGTCTCAAGATTGTATTATCC 110
|||||||| || | ||||||| | || | | | || || ||||| ||||||||||||||
Sbjct 67 TCACTTCCAGAAGATTTGATAGTGAG-TATCTTAGCCCGTGTCTCGAGATTGTATTATCC 125
Query 111 GATTCTCTCCTTTGTCTCCAAGAGCTTTCGATCTCTCC-TAGCTTCACCGGAGCTTTA-C 168
| ||||||||| ||||||||| |||| || || |||| || |||||||||||||||| |
Sbjct 126 AACTCTCTCCTTAGTCTCCAAGCGCTTCCGCTCGCTCCTTA-CTTCACCGGAGCTTTACC 184
Query 169 AAGGA-ACGGTCACTCTTGA-ACCGCACCGAGGGTTGTCTATATGTATGCTTA-TACTTA 225
|| | |||||||| || | || | ||| || ||| |||||||||||| | ||
Sbjct 185 AA--ACCCGGTCACTATT-AGGTCGTAGCGATAATTTTCTCTATGTATGCTTACGA-TTC 240
Query 226 AATCCTTTTGA--G-AGCCCTAGCTGGTTTACT-CTCTGCT-TGAAACCTGATCAAGCCC 280
|| | ||| | | |||| ||||||| | | || || | || ||| ||||| ||
Sbjct 241 TCTCGTACTGACCGAATCCCTCGCTGGTTCA-TGCTGTG-TCGGAGACCAAATCAAATCC 298
Query 281 T-ATC--T---TCTGA-AACAAGTAATAAGAAGAAGTCAAGTGGGTATGTTTTGGCTACA 333
| | | | || | || ||| || |||||||||||||| |||||||||||||| |||
Sbjct 299 TAACCAGTGACACTAAGAAGAAG-AAGAAGAAGAAGTCAAGCGGGTATGTTTTGGCAACA 357
Query 334 GTATCAATTCCA-CATCCTCGTCTTGTGCAAC-GTTCCA-GTCTCGTGGCGGTTGGTTCT 390
| ||||| || ||| ||| || || || || ||| || ||||||||||||||||||||
Sbjct 358 ATCCCAATT-CACCATTCTCCTCCTGCGC-ACGGTT-CAGGTCTCGTGGCGGTTGGTTCT 414
Query 391 AATATCTACAACATTGGCAG-ATCCATATCACC-TTA-C--TC-T-AG-TGTCT-CGATT 441
||||||||||||||||| || |||||| | || || | || | | || || | ||
Sbjct 415 AATATCTACAACATTGG-AGGATCCATCT-ACGATTCGCCCTCATCAAATG-CTTCAATC 471
Query 442 TTTGATTGCCGGTCTCACACGTGGCGCGAGGCTCCAAGCTTGCCA-GTGGAGC 493
| |||||| |||||||||| |||| | | ||||||||| ||| | |||||||
Sbjct 472 CTAGATTGCTGGTCTCACACATGGCTCAAAGCTCCAAGCATGC-ATGTGGAGC 523
> Ahg484253 jgi|Araly1|484253|fgenesh2_kg.5__245__AT2G03460.1
Length=897
Score = 147 bits (79), Expect = 2e-34
Identities = 313/420 (75%), Gaps = 39/420 (9%)
Strand=Plus/Plus
Query 422 CTTACTCTAGTGTCTCGATTTTTGATTGCCGGTCTCACACGTGGCGCGAGGCTCCAAGCT 481
||| ||| || |||||| || | ||||| |||||||||||||||||||||||||||||||
Sbjct 96 CTTCCTCAAGCGTCTCGGTTCTGGATTGTCGGTCTCACACGTGGCGCGAGGCTCCAAGCT 155
Query 482 TGCCAGTGGAGCTA-GTT-GAAGTTTCTGCTGGCGTCCTTGA-CGGAAAGATATATGTAG 538
||| | || |||| ||| | ||||||||| | ||| |||| || ||||||||| ||||
Sbjct 156 TGCGGGAGGGGCTATGTTCG--GTTTCTGCTAGTGTCATTGATCG-AAAGATATACGTAG 212
Query 539 CCGGAAGTTGCAAAGATGGAGATTCTCTTAACTTGAAGAACACTTTCGAGGTGTTCGACA 598
| ||| ||| || |||||| ||| | |||| |||||| | |||||||||||||||
Sbjct 213 CAGGACGTTCCATAGATGGTGATAAT---AACTCGAAGAATTCGGTCGAGGTGTTCGACA 269
Query 599 CAAAAACACAAGTTTGGGATCATGTA--CCTATCCCTTACAACGAAACAAAACACAACAT 656
| |||| ||| ||||||||| | | || || ||| || ||| ||| || | | |
Sbjct 270 CTGAAACCCAAATTTGGGATCCGG-AGGCC-ATTACTTGCAGCGAGACACAAGGCGATTT 327
Query 657 TTAC---TCCAAAAGCTTATGTATTGAC-GAAAAGTGGT-ATGTAGGGG-CTAA-G---A 706
|||| | ||||| | |||||||||| |||| || | |||| || | || | |
Sbjct 328 TTACGAATGCAAAACCACATGTATTGACAGAAA-GTT-TCATGT-GGTGACTCTCGGTCA 384
Query 707 GAAAG-GT-GGTT-TCTTACAATCCCAAGAAAGGTATATGGGACCTTGTT-GAATCAGAG 762
|||| | |||| | ||||||| |||||||||||| ||||||| ||| || | |
Sbjct 385 AAAAGAGGCGGTTGT-TTACAATTCCAAGAAAGGTAGATGGGACAGGGTTAGACGAAAA- 442
Query 763 AT-G-TGTAGTTATAAGTCTTCATATGATTATTGTGAGATAGAGAACGTTTTGTACTCTG 820
|| | | ||| |||||| |||| | |||||| ||||||||||| |||||||||||||
Sbjct 443 ATAGATC-AGT-ATAAGTTTTCA---GCTTATTGCGAGATAGAGAATGTTTTGTACTCTG 497
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39990939933
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5