BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G41120.1 Length=2218 Score E Sequences producing significant alignments: (Bits) Value Ahg493863 jgi|Araly1|493863|fgenesh2_kg.7__3296__AT5G41120.1 3273 0.0 Ahg493862 jgi|Araly1|493862|fgenesh2_kg.7__3295__AT5G41130.1 2252 0.0 Ahg484460 jgi|Araly1|484460|fgenesh2_kg.5__452__AT3G26840.1 625 5e-178 > Ahg493863 jgi|Araly1|493863|fgenesh2_kg.7__3296__AT5G41120.1 Length=2179 Score = 3273 bits (1772), Expect = 0.0 Identities = 2020/2139 (94%), Gaps = 20/2139 (1%) Strand=Plus/Plus Query 71 TCACTGATGGAACCTCTCCCACCTTCTTCTCCTCAGCTTCGACAAAG-GCTTATAATCTC 129 |||||||||||| |||||| | | |||||||||||||||||| ||| |||| ||||||| Sbjct 53 TCACTGATGGAATCTCTCCTA-C--CTTCTCCTCAGCTTCGAC-AAGAGCTTCTAATCTC 108 Query 130 CATTTTCT-CTACTCGAATTCAACCCAACGACTTACGAATCC-GAAATTCGGAATCGGCG 187 |||||| | || || |||||||||||||||||||||| | || |||||| ||||||| | Sbjct 109 CATTTT-TGCTTCTGGAATTCAACCCAACGACTTACG-AGCCGGAAATTTGGAATCGATG 166 Query 188 GGAAGTTGAAGGTGACGGTGAATCCGTATTCGTATACAGAGGAAGTACGGCCTGAGGAAC 247 ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 167 TGAAGTTGAAGGCGACGGTGAATCCGTATTCGTATACGGAGGAAGTACGGCCTGAGGAAC 226 Query 248 GGAAGAGTTTGACGGATTTTTTAACGGAAGCTGGAGATTTCGTTA-ATTCAGACGGCGGA 306 ||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||| Sbjct 227 GGAAGAGTTTGACGGATTTTTTAGTGGAAGCTGGAGATTTCGTTAGA-TCAGACGGCGGA 285 Query 307 GATGGTGGTCCGCCACGGTGGTTCTCACCGTTGGAATGTGGCGCACGTGCTCCTGAATCT 366 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 286 GATGGTGGTCCGCCACGGTGGTTCTCACCGTTGGAATGTGGCGCACGTGCTCCTGGATCT 345 Query 367 CCTCTTCTTCTCTACTTACCTGGGATCGATGGAACTGGATTAGGGCTCATTCGCCAGCAT 426 |||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||| Sbjct 346 CCTCTTCTTCTCTACTTACCTGGGATTGATGGTACTGGATTAGGGCTCATTCGTCAACAT 405 Query 427 AAGAGGCTTGGAGAGATATTTGACATATGGTGCCTTCACTTTCCAGTAAAAGATCGTACT 486 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 406 AAGAGGCTTGGAGAGATATTTGACATATGGTGCCTTCACTTTCCGGTGAAAGATCGTACT 465 Query 487 CCTGCTCGAGATATTGGGAAGCTCATTGAGAAGACAGTTAGGTCAGAGCACTACCGTTTC 546 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 466 CCTGCTCGAGATCTTGTGAAGCTCATTGAGAAGACAGTTAGGTCAGAGCACTACCATTTC 525 Query 547 CCAAATAGACCCATTTATATAGTTGGAGAATCTATTGGAGCTTCTCTTGCTCTGGATGTT 606 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 526 CCAAATAGACCAATATATATAGTTGGAGAATCTATTGGAGCTTCTCTTGCTCTAGATGTT 585 Query 607 GCAGCCAGTAACCCTGACATTGATCTTGTCTTGATTCTGGCTAATCCAGTCACACGTTTT 666 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 586 GCAGCCAGTAACCCTGATATTGATCTTGTCTTGATTCTGGCTAATCCAGTCACACGTTTC 645 Query 667 ACCAACTTAATGTTGCAACCTGTATTGGCCCTACTGGAAATTTTGCCTGACGGAGTTCCC 726 | |||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 646 AACAACTTCATGTTGCAACCTTTATTGGGCCTACTGGAAATTTTGCCTGACGAAGTTCCC 705 Query 727 GGCTTGATAACAGAGAATTTTGGGTTTTACCAAGAAATGTTCGAGACTATGCTCAATGAA 786 ||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||| Sbjct 706 AGCTTGATAACAGAGAATTTCGTGTTTAACCAAGAGATGTTCGAGACTATGCTCAATGAA 765 Query 787 AATGATGCCGCGCAGATGGGTAGAGGGCTATTAGGAGACTTCTTTGCAACTTCATCTAAT 846 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 ACTGATGCCGCGCAGATGGGTAGAGGGCTATTAGGAGACTTCTTTGCAACTTCATCTAAT 825 Query 847 CTGCCTACTCTGATTAGAATCTTTCCCAAGGACACACTTCTATGGAAGCTTCAATTGCTT 906 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 CTGCCTACTCTGATTAGAATCTTTCCCAAGGACACACTTCTATGGAAGCTTCAATTGCTA 885 Query 907 AAGTCTGCTTCAGCGTCTGCTAATTCTCAGATGGACACAGTCAACGCCCAAACACTGATA 966 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 886 AAGTCTGCATCAGCGTCTGTTAATTCTCAGATGGACACAGTCAACGCCCAAACACTGATA 945 Query 967 CTTCTGAGTGGACGTGATCAATGGTTAATGAACAAGGAAGACATTGAAAGACTCCGTGGT 1026 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 946 CTTCTGAGTGGACGTGATCAATGGTTAATGAACAAGGAAGACATTGAAAGACTCCGTGGT 1005 Query 1027 GCATTGCCAAGATGTGAAGTTCGTGAGCTTGAGAATAATGGACAGTTCCTCTTCTTGGAG 1086 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 1006 GCATTGCCAAGATGTGAAGTTCGTGAGCTTGAGCATAATGGACCGTTCCTCTTCTTGGAG 1065 Query 1087 GATGGAGTAGATCTGGTGAGTATCATCAAGCGTGCGTATTATTATCGCCGTGGGAAGTCA 1146 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| Sbjct 1066 GATGGAGTAGATCTGGTGACTATCATCAAGCGTGCCTATTATTATCGCCGTGGGATGTCA 1125 Query 1147 CTTGATTACATTTCGGATTACATTCTGCCTACCCCATTTGAGTTTAAAGAGTATGAAGAA 1206 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 1126 CTTGATTACATTTCGGATTACATTTTGCCTACCCCATTTGAGTTCAAAGAGTATGAAGAA 1185 Query 1207 TCACAAAGATTGCTAACTGCTGTTACCTCCCCAGTCTTTCTTTCAACTCTAAAGAATGGT 1266 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1186 TCACAAAGATTGCTAACTGCTGTTACCTCCCCAGTCTTTCTCTCAACTCTAAACAATGGT 1245 Query 1267 GCAGTGGTAAGATCGCTTGCAGGAATACCTTCAGAGGGACCGGTTCTGTATGTTGGCAAT 1326 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1246 GCAGTAGTAAGATCACTTGCAGGAATACCTTCAGAGGGACCGGTTCTGTATGTTGGCAAT 1305 Query 1327 CACATGTTGCTTGGTATGGAGTTGCATGCAATAGCACTTCATTTTTTGAAAGAAAGGAAC 1386 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1306 CACATGTTGCTTGGTATGGAGTTGCATGCAATAGCACTTCATTTCTTGAAAGAAAGGAAC 1365 Query 1387 ATTCTATTGCGAGGACTGGCACATCCATTGATGTTTACCaaaaaaaCTGGCTCAAAACTC 1446 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1366 ATTCTGTTGCGAGGACTGGCACATCCATTGATGTTTACCAAAAAATTTGGCTCAAAACTC 1425 Query 1447 CCTGACATGCAGCTGTACGACTTATTTAGGATTATAGGCGCAGTTCCCGTCTCGGGAATG 1506 ||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1426 CCTGATATGCAGTTGTACGACTTATTTAGGATAATAGGCGCAGTTCCTGTCTCGGGAATG 1485 Query 1507 AATTTCTACAAACTACTTCGTTCAAAGGCTCACGTGGCTTTGTACCCTGGGGGTGTTCGT 1566 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1486 AATTTTTACAAACTACTTCGTTCAAAGGCTCACGTGGCTTTGTACCCTGGAGGTGTTCGT 1545 Query 1567 GAAGCTTTGCACAGAAAGGGTGAAGAATACAAGTTATTTTGGCCAGAACATTCGGAGTTT 1626 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1546 GAAGCTTTGCATAGAAAGGGTGAAGAATACAAGTTGTTTTGGCCAGAACATTCGGAGTTT 1605 Query 1627 GTAAGGATAGCATCTAAATTTGGAGCAAAAATCATTCCTTTTGGAGTTGTTGGAGAAGAT 1686 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 1606 GTAAGGATAGCATCTAAATTTGGAGCAAAAATCATTCCTTTTGGAGCTGTTGGTGAAGAT 1665 Query 1687 GATCTTTGTGAAATGGTTTTAGATTATGATGATCAAATGAAGATCCCTTTCTTGAAGAAT 1746 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1666 GATCTCTGTGAAATGGTTTTAGATTACAATGATCAAATGAAGATCCCTTTCTTGAAGAAT 1725 Query 1747 CTTATAGAAGAGATAACACAAGACTCTGTTAACTTGAGGAACGATGAAGAAGGCGAATTG 1806 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1726 CTTATTGAAGAGATAACACAAGACTCCGTTAACTTGAGGAACGATGAAGAAGGCGAATTG 1785 Query 1807 GGAAAACAAGATTTACATCTACCTGGAATAGTTCCAAAGATCCCGGGACGGTTTTACGCA 1866 |||||||||||||| ||| | |||||||||||||| ||||| |||||||||||||||| | Sbjct 1786 GGAAAACAAGATTTGCATGTGCCTGGAATAGTTCCCAAGATTCCGGGACGGTTTTACGTA 1845 Query 1867 TACTTTGGGAAACCAATAGACACAGAAGGTAGAGAGAAAGAGCTAAACAATAAAGAGAAA 1926 |||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| Sbjct 1846 TACTTTGGGAAACCAATAGAAACAGAAGGTAGAGGGAAAGAGCTAAATAATAAAGAGAAA 1905 Query 1927 GCTCATGAGGTTTACTTGCAGGTCAAGTCTGAGGTAGAAAGATGTATGAACTATTTGAAA 1986 |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| ||| Sbjct 1906 GCTCATGAGGTTTACTTGGAGGTCAAGTCTGAGGTTGAAAGATGTATGACCTATTT-AAA 1964 Query 1987 -ATCAAAAGAGAAACTGATCCTTACAGAAACATTTTGCCGAGGTCCCTCTATTACCTCAC 2045 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1965 GATGAAAAGAGAAACTGATCCTTACAGAAACATTTTGCCGAGGTCGCTCTATTACCTCTC 2024 Query 2046 TCATGGTTTCTCTTCCCAAATCCCAACCTTCGATCTCCGAAATCATTAAATTTAGTTACT 2105 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2025 TCACGGTTTCTCTTCCCAAATCCCAACCTTTGATCTCCGAAATCATTAAATTTAGTTACT 2084 Query 2106 -GTGTTGT-AGCTCTATCT-ACAAGATATCTTATTTAACTGTGGTGATTAAACACGTAGA 2162 | || | | |||| || ||| |||| |||||||||||||| |||||||||||||| | Sbjct 2085 AGA-TTCTTAT-TCTA-CTTACAGGATACCTTATTTAACTGTG-TGATTAAACACGTAAA 2140 Query 2163 TTTGGGTGTGTTATTGTAAAAAATGGTTGGTATATATAA 2201 ||||||| |||||||||||| ||| |||||||||||||| Sbjct 2141 TTTGGGTATGTTATTGTAAACAATCGTTGGTATATATAA 2179 > Ahg493862 jgi|Araly1|493862|fgenesh2_kg.7__3295__AT5G41130.1 Length=2226 Score = 2252 bits (1219), Expect = 0.0 Identities = 1712/1949 (88%), Gaps = 37/1949 (2%) Strand=Plus/Plus Query 183 CGGCGGGAAGTTGAAGGTGACGGTGAATCCGTATTCGTATACAGAGGAAGTACGGCCTGA 242 ||| |||||| ||| || |||||||||||||||| |||| || |||| | | ||| || Sbjct 172 CGGAGGGAAGGTGACGGCGACGGTGAATCCGTATACGTACACGGAGGCGGCGCAGCCAGA 231 Query 243 GGAACGGAAGAGTTTGACGGATTTTTTAACGGAAGCTGGAGATTTCGTTA-ATTCAGACG 301 || ||||||||||||||||||||||| ||||||| |||||||| ||| | || |||| Sbjct 232 AGAGCGGAAGAGTTTGACGGATTTTTTTGTGGAAGCTAGAGATTTCTTTAGA-TCCGACG 290 Query 302 GCGGAGATGGTGGTCCGCCACGGTGGTTCTCACCGTTGGAATGTGGCGCACGTGCTCCTG 361 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| | Sbjct 291 GCGGAGATGGTGGTCCGCCTCGGTGGTTCTCTCCGTTGGAATGTGGCGCACGTTCTCCAG 350 Query 362 AATCTCCTCTTCTTCTCTACTTACCTGGGATCGATGGAACTGGATTAGGGCTCATTCGCC 421 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 351 AATCTCCTCTTCTTCTCTACTTACCTGGGATCGATGGTACTGGATTAGGGCTCATTCGTC 410 Query 422 AGCATAAGAGGCTTGGAGAGATATTTGACATATGGTGCCTTCACTTTCCAGTAAAAGATC 481 ||||||| | ||||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 411 AGCATAAAAAGCTTGGAGAGATATTTGACATATGGTGCCTTCATTTTCCAGTCACTGATC 470 Query 482 GTACTCCTGCTCGAGATATTGGGAAGCTCATTGAGAAG-ACAGTTAGGTCAGAGCACTAC 540 |||| |||||||||||| ||| ||||||||||||| || ||||||||||||||| ||| | Sbjct 471 GTACCCCTGCTCGAGATCTTGTGAAGCTCATTGAG-AGAACAGTTAGGTCAGAGTACTTC 529 Query 541 CGTTTCCCAAATAGACCCATTTATATAGTTGGAGAATCTATTGGAGCTTCTCTTGCTCTG 600 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 530 CGTTTACCAAATAGACCCATTTATATAGTTGGAGAATCTATTGGAGCTTCTCTTGCTCTA 589 Query 601 GATGTTGCAGCCAGTAACCCTGACATTGATCTTGTCTTGATTCTGGCTAATCCAGTCACA 660 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 590 GATGTTGCAGCCAGTAACCCTGACATCGATCTTGTCTTGATTCTGGCTAATCCAGTCACA 649 Query 661 CGTTTTACCAACTTAATGTTGCAACCTGTATTGGCCCTACTGGAAATTTTGCCTGACGGA 720 ||||| | |||||| |||||||||||| ||| || ||||||||||||||||| ||| || Sbjct 650 CGTTTCAACAACTTCATGTTGCAACCTTTATCGGGTCTACTGGAAATTTTGCCAGACAGA 709 Query 721 GTTCCCGGCTT-GATAACAGAGAATTTT-GGGTT--------TTA-CC-----AAGAAAT 764 |||||| |||| | | || |||||| || || ||| || || ||| Sbjct 710 GTTCCCAGCTTCCTTGA-GGAAAATTTTCGGTTTGAACAAGGTTATCCGTTTGCAGCAAT 768 Query 765 GTTCGAGACTATGCTCAATGAAAATGATGCCGCGCAGATGGGTAGAGGGCTATTAGGAGA 824 ||||||||||||||| ||||||| ||||||||| ||||||||| | |||||||||||||| Sbjct 769 GTTCGAGACTATGCTGAATGAAACTGATGCCGCACAGATGGGTGGTGGGCTATTAGGAGA 828 Query 825 CTTCTTTGCAACTTCA-TCTAATCTGCCTACTCTGATTAGAATCTTTCCCAAGGACACAC 883 | |||||||||||||| | ||| ||||| |||||| ||| |||||||| |||||||||| Sbjct 829 CATCTTTGCAACTTCAGT-TAACCTGCCGACTCTGGCTAGGATCTTTCCAAAGGACACAC 887 Query 884 TTCTATGGAAGCTTCAATTGCTTAAGTCTGCTTCAGCGTCTGCTAATTCTCAGATGGACA 943 | ||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||| ||| Sbjct 888 TGCTATGGAAGCTTCAACTGCTTAAGTCTGCTTCAGCATCTGCTAAGTCTCACATGCACA 947 Query 944 CAGTCAACGCCCAAACACTGATACTTCTGAGTGGACGTGATCAATGGTTAATGAACAAGG 1003 ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct 948 CAGTCAAAGCCCAAACACTAATACTTTTGAGTGGACGTGATCAATGGTTACTGAACAAGG 1007 Query 1004 AAGACATTGAAAGACTCCGTGGTGCATTGCC-AAGATGTGAAGTTCGTGAGCTT-GAGAA 1061 |||||||||||||||||| | || ||||||| || |||||||| ||| || || ||||| Sbjct 1008 AAGACATTGAAAGACTCCATAGTACATTGCCGAA-TTGTGAAGTCCGTAAG-TTCGAGAA 1065 Query 1062 TAATGGACAG-TTCCTCTTCTTGGAGGAT-GGAGTAGATCTGGTGAGTATCATCAAGCGT 1119 | | |||||| || || || ||||||||| ||| |||||||||||| |||||||||| || Sbjct 1066 TTACGGACAGCTT-CTATTTTTGGAGGATGGGA-TAGATCTGGTGACTATCATCAAGTGT 1123 Query 1120 GCGTATTATTATCGCCGTGGGAAGTCACTTGATTACATTTCGGATTACATTCTGCCTACC 1179 | ||||||||||||||||| ||||| ||||||||| |||| |||| ||||||||||||| Sbjct 1124 ACTTATTATTATCGCCGTGGAAAGTCGCTTGATTACGTTTCTGATTTCATTCTGCCTACC 1183 Query 1180 CCATTTGAGTTTAAAGAGTATGAAGAATCACAAAGATTGCTAACTGCTGTTACCTCCCCA 1239 ||||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1184 CCATTTGAGCTCAAAGAGTATGAAGAATCACAAAGATTGCTAACTGTTATTACCTCCCCA 1243 Query 1240 GTCTTTCTTTCAACTCTAAAGAATGGTGCAGTGGTAAGATCGCTTGCAGGAATACCTTCA 1299 |||||||| ||||||||| | || ||| |||| |||||||| ||||| |||||||||||| Sbjct 1244 GTCTTTCTCTCAACTCTAGACAACGGTACAGTAGTAAGATCACTTGCGGGAATACCTTCA 1303 Query 1300 GAGGGACCGGTTCTGTATGTTGGCAATCACATGTTGCTTGGTATGGAGTTGCATGCAATA 1359 |||||||||||||| |||||||||||||||||||||||||||| || |||| | || | Sbjct 1304 GAGGGACCGGTTCTCTATGTTGGCAATCACATGTTGCTTGGTACCGAATTGCGTCCAGCA 1363 Query 1360 GCACTTCATTTTTTGAAAGAAAGGAACATTCTATTGCGAGGACTGGCACATCCATTGATG 1419 ||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct 1364 GCAATTCATTTCTTGAAAGAGAGGAACATTCTTTTGCGAGGACTGGCACATCCAGTGATG 1423 Query 1420 TTTACCaaaaaaaCTGGCTCAAAACTCCCTGACATGCAGCTGTACGACTTATTTAGGATT 1479 ||| |||||||| |||||||||||||||||| ||||| ||| ||||| | ||||||| Sbjct 1424 TTTGCCAAAAAATTTGGCTCAAAACTCCCTGATATGCATATGTTCGACTCAGTTAGGATG 1483 Query 1480 ATAGGCGCAGTTCCCGTCTCGGGA-ATGAATTTCTACAAACTACTTCGTTCAAAGGCTCA 1538 |||||||||||||| ||||| | || |||||||| |||||||| |||||||||||||| Sbjct 1484 ATAGGCGCAGTTCCGGTCTC-AAATATCAATTTCTATAAACTACTACGTTCAAAGGCTCA 1542 Query 1539 CGTGGCTTTGTACCCTGGGGGTGTTCGTGAAGCTTTGCACAGAAAGGGTGAAGAATACAA 1598 |||| |||||| ||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 1543 TGTGGTTTTGTATCCTGGAGGTGTTCGTGAAGCTTTGCACAGAAAGGGTGAAGTATACAA 1602 Query 1599 GTTATTTTGGCCAGAACATTCGGAGTTTGTAAGGATAGCATCTAAATTTGGAGCAAAAAT 1658 ||| ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| Sbjct 1603 GTTGTTTTGGCCAGAACATTCAGAGTTTGTAAGGACCGCATCTAAATTTGGAACAAAAAT 1662 Query 1659 CATTCCTTTTGGAGTTGTTGGAGAAGATGATCTTTGTGAAATGGTTTTAGATTATGATGA 1718 |||||||||||| |||||||| ||||||||||| |||||| |||| || ||||| |||| Sbjct 1663 CATTCCTTTTGGTGTTGTTGGTGAAGATGATCTCTGTGAAGTGGTCTTCGATTACAATGA 1722 Query 1719 TCAAATGAAGATCCCTTTCTTGAAGAATCTTATAGAAGAGATAACACAAGACTCT-GTTA 1777 ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| || Sbjct 1723 TCAAATGAAGATCCCTTTCCTGAAGAATCTTATAAAAGAGTTAACACAAGACTCTACTT- 1781 Query 1778 ACTTGAGGAACGATGAAGAAGGCGAATTGGGAAAACAAGATTTACATCTACCTGGAATAG 1837 |||||||||||| ||||||||| ||| | || || |||| ||| ||| | ||||||||| Sbjct 1782 ACTTGAGGAACGGTGAAGAAGGAGAAGTAGGCAACCAAGCTTTGCATATGCCTGGAATAA 1841 Query 1838 TTCCAAAGATCCCGGGACGGTTTTACGCATACTTTGGGAAACCAATAGACACAGAAGGTA 1897 |||| |||||||||||||||||||||| ||||||||| | ||||||||| |||||||||| Sbjct 1842 TTCCCAAGATCCCGGGACGGTTTTACGTATACTTTGGTAGACCAATAGAAACAGAAGGTA 1901 Query 1898 GAGAGAAAGAGCTAAACAATAAAGAGAAAGCTCATGAGGTTTACTTGCAGGTCAAGTCTG 1957 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1902 GAGAGAAAGAGCTAAATGATAAAGAGAAAGCTCATGAGGTTTACTTGCAGGTCAAGTCTG 1961 Query 1958 AGGTAGAAAGATGTATGAACTATTTGAAAATCAAAAGAGAAACTGATCCTTACAGAAACA 2017 |||| |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||| Sbjct 1962 AGGTTGAAAGATGTATGAATTATTTGAAGATCAAAAGAGAAGGTGATCCTTATAGAAACA 2021 Query 2018 TTTT-GCCGAGGTCCCTCTATTACCTCACTCATGGTTTCTCTTCCCAAATCCCAACCTTC 2076 |||| || ||||||||||||| ||||| | |||||||| ||||| ||| ||||||| || Sbjct 2022 TTTTAGC-GAGGTCCCTCTATCACCTCTCACATGGTTTGTCTTCGCAAGTCCCAACGTTT 2080 Query 2077 GATCTCCGAAATCATTAAATTTAGTTACT 2105 || ||||||||||| ||| ||| | |||| Sbjct 2081 GACCTCCGAAATCAATAATTTTTGATACT 2109 > Ahg484460 jgi|Araly1|484460|fgenesh2_kg.5__452__AT3G26840.1 Length=2258 Score = 625 bits (338), Expect = 5e-178 Identities = 1022/1337 (76%), Gaps = 107/1337 (8%) Strand=Plus/Plus Query 798 GCAGATGGGTAGAGGGCTATTAGGAGACT-TCTTTGCAACTTCATCTAATCTGCCTACTC 856 ||| |||||| ||||| | || |||| | || |||| |||| ||||||| ||||||| Sbjct 818 GCAAATGGGTGGAGGGATGCTAAGAGA-TCTCCTTGCTGTTTCAGCTAATCTTCCTACTC 876 Query 857 TGATTAGAATCTTTCCC-AAGGACACACTTCTATGGAAGCTTCAATTGCTTAAGTCTGCT 915 | | ||| || ||||| ||||||||||| || |||||||| || |||| ||||||||| Sbjct 877 TTAGTAGGAT-GTTCCCTAAGGACACACTGCTTTGGAAGCTGGAAATGCTAAAGTCTGCT 935 Query 916 -TCAGCGTCTGCT-AATTCTCAGATGGACACAGTCA-ACGCCCAAACACTGATACTTCTG 972 | || |||| | |||||||| || || |||||| | || ||||||| ||||||||| Sbjct 936 AT-TGCTTCTG-TGAATTCTCACATATACTCAGTCAGA-GCGGAAACACTCATACTTCTG 992 Query 973 AGTGGACGTGATCAATGGTTAATGAACAAGGAAGACATTGAAAGACTCCGTGGTGCA--T 1030 |||||||| ||||||||| | ||||||||||||||||||| ||| | | | | ||| | Sbjct 993 AGTGGACGCGATCAATGGCTGCTGAACAAGGAAGACATTGACAGA-TAC-TCGCGCACGT 1050 Query 1031 TGCCAAGATGTGA-AGTTCGTGAGCTTGA-GAATAATGGACAG-TTCCTCTTCTTGGAGG 1087 |||||| |||| | || ||| |||| || | | ||||||||| |||| ||| ||||||| Sbjct 1051 TGCCAAAATGT-ATTGTCCGTAAGCTCGATG-ACAATGGACAGTTTCCCCTT-TTGGAGG 1107 Query 1088 ATGGAGTAGATCTGG-TGAGTATCATCAAGCGTGCGTATTATTATCGCCGTGGGAAGTCA 1146 | || |||||||||| | | |||||| ||| || | | || |||||||||||||||||| Sbjct 1108 ACGGCGTAGATCTGGCT-ACTATCATTAAGTGTACTTGTTTTTATCGCCGTGGGAAGTCT 1166 Query 1147 CTTGATTACATTTCGGATTACATTCTGCCTACCCCATTTGAGTTTAAAGAGTATGAAGA- 1205 | ||| ||||| ||||||| ||| ||||||| |||||||| ||||| | | || | Sbjct 1167 CACGATCACATTACGGATTATATTATGCCTACTACATTTGAG-TTAAA-ACAACAAATAG 1224 Query 1206 ATC-A-CAAAGATTGCTAACT-GCTGTTACCTCCCCAGTCTTTCTT-TCAACTCTA-AAG 1260 | | | || |||| |||| | | || ||| ||||| || | || ||||||||| ||| Sbjct 1225 A-CGACCACCGATTACTAA-TGGATGGTACTTCCCCTGT-AATGTTGTCAACTCTAGAAG 1281 Query 1261 AATGGTGCAGTGGTAA-GATCGCTTGCAGGAATACCTTCAGAGGGACCGGTTCTGTATGT 1319 | || |||| |||| || | || | |||| |||||||||||||||||||||||||||| Sbjct 1282 -ACGGCACAGTTGTAAGGAGC-CTAGAAGGATTACCTTCAGAGGGACCGGTTCTGTATGT 1339 Query 1320 TGGCAATCACATGTTGCTTGGTATG-GAGTT-GCATGCAATAGC-A-CTTCATTTTTTGA 1375 |||| |||||||| | |||| || ||||| || | |||| | | || || | ||| Sbjct 1340 TGGCTATCACATGATA-TTGGGATTTGAGTTAGC-TCCAAT-GTTAACT-CAACTCATGA 1395 Query 1376 AAGAAAGGAACATTCTAT-TGCGAGGACTGGCACATCC-ATTGATGTTTACCaaaaaaaC 1433 |||| |||||||||| | |||| || |||||||||| || ||| |||| | || | Sbjct 1396 AAGAGAGGAACATTC-ACCTGCGGGGTTTGGCACATCCGAT-GATATTTA--AGAAT--C 1449 Query 1434 TGGCTCAAAACTCCCT-G---ACATGCAGCTGTACGACTTATTTAGGATTA-TAGGCGCA 1488 | |||| |||| | | ||| | || ||| ||| || || | ||| | || | | Sbjct 1450 T---TCAAGACTCGTTAGTCGACACGAAGATGTTTGACAAATATAAG-TTAATGGGTGGA 1505 Query 1489 GTTCCCGTCTCGGGAATG-AATTTCTACAAACTACTTCGTTCAAAGGCTCACGTGGCTTT 1547 ||||| ||||| | | ||| ||||||||||||||||| |||| |||||||| |||| Sbjct 1506 GTTCCAGTCTCCC-AGTTCAATATCTACAAACTACTTCGTGAAAAGTCTCACGTG-CTTT 1563 Query 1548 -GTACCCTGGGGGTGTTCGTGAAGCTTTGCACAGAAAGGGTGAAGAATACAAGTTATTTT 1606 ||||||||| ||||| |||||||||||||| ||||||||||||||||||||| | |||| Sbjct 1564 TGTACCCTGGAGGTGTCCGTGAAGCTTTGCATAGAAAGGGTGAAGAATACAAGCTGTTTT 1623 Query 1607 GGCCAGAAC-ATTCGGAGTTTGTAAG-GATAGCATCTAAATTTGGAGCAAAAATCATTCC 1664 ||||||||| || | ||||||||||| | | ||||||||||||||||| |||||| |||| Sbjct 1624 GGCCAGAACGAT-CTGAGTTTGTAAGAGTT-GCATCTAAATTTGGAGCGAAAATCGTTCC 1681 Query 1665 TTTTGGAGTTGTTGGAGAAGATGATCTT-TGTGAAATGGTTTTAGATTATGATGATCAAA 1723 ||| || |||||||||||||| || | | || ||||| || |||||| ||||||||| Sbjct 1682 TTTCGGTGTTGTTGGAGAAGACGA-CATCTGCGAAATTGTCCTAGATTCCAATGATCAAA 1740 Query 1724 TGAAG-ATCCCTTTCTTGAAGAATCTTA-TAGAAGAGATAACACAAG-ACTCTGTTAACT 1780 ||| |||||| || | ||| || ||| | ||| || ||| ||| || ||| ||| Sbjct 1741 -GAAACATCCCTATCCTAAAGGAT-TTAATGGAAAAGGCAACT-AAGGACGCTGGGAACA 1797 Query 1781 TGAGG-AA--CGATGAAGAAGGCGAATTGGGAAAACAAGATTTAC-ATCTACCTGGAATA 1836 | ||| || ||| || || | |||||||||||| ||||||| | || | || ||| | Sbjct 1798 TAAGGGAAGGCGACGA-GA-G-CGAATTGGGAAACCAAGATTG-CTATTTCCCAGGACTG 1853 Query 1837 GTTCCAAAGATCCCGGGACGGTTTTACGCAT-ACTTTGGGAAACCAATAGACACAGAAGG 1895 || || ||||| ||||| ||||| ||| || ||||||| ||||||||||| |||| ||| Sbjct 1854 GTACCTAAGATTCCGGGGCGGTTCTACT-ATTACTTTGGAAAACCAATAGAAACAGCAGG 1912 Query 1896 TAGAG-AGAAAGAGCT-AAACAATAAAGAGAAAG-CTCATGAGGTTTACTTGCAGGTCAA 1952 || || |||||||||| ||| | ||||| |||| | || ||| |||||||||| || || Sbjct 1913 TA-AGGAGAAAGAGCTGAAAGAC-AAAGA-AAAGGCACAAGAGCTTTACTTGCAAGTAAA 1969 Query 1953 GTCTGAGGTAGAA-AGATGTAT-GAACTATTTGAAAA-TCAAAAGAGAAACTGATCCTTA 2009 ||||||||| ||| | ||| || | |||||| |||| | |||||||| | ||||||||| Sbjct 1970 GTCTGAGGTCGAACA-ATGCATTGC-CTATTT-AAAAGTAAAAAGAGAGAGTGATCCTTA 2026 Query 2010 CAGAAACATT-TTGCCGAGG-TCCCTCTATTA--CCTCACTCATGGTTTCTCTTCCCAAA 2065 |||| || || ||||| ||| | | ||| | |||||| |||||| ||||| ||| Sbjct 2027 CAGACAC-TTGTTGCCAAGGATGT-TGTATCAAGCCTCAC--ATGGTTGGTCTTCTGAAA 2082 Query 2066 TCCCAACCTTCGATCTC 2082 | ||||| || |||||| Sbjct 2083 TTCCAACGTTTGATCTC 2099 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83493817040 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5