BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G42240.1
Length=1761
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494806 jgi|Araly1|494806|fgenesh2_kg.8__622__AT5G42240.1 2447 0.0
Ahg494807 jgi|Araly1|494807|fgenesh2_kg.8__623__AT5G42230.1 1328 0.0
Ahg331179 jgi|Araly1|331179|fgenesh1_pm.C_scaffold_8000522 1279 0.0
Ahg497456 jgi|Araly1|497456|fgenesh2_kg.482__1__AT5G42230.1 784 0.0
Ahg913585 jgi|Araly1|913585|Al_scaffold_0001_3839 782 0.0
Ahg906053 jgi|Araly1|906053|Al_scaffold_0003_3181 769 0.0
> Ahg494806 jgi|Araly1|494806|fgenesh2_kg.8__622__AT5G42240.1
Length=1686
Score = 2447 bits (1325), Expect = 0.0
Identities = 1578/1700 (93%), Gaps = 18/1700 (1%)
Strand=Plus/Plus
Query 66 AAAGCTGTAGAAGATGGCGAGTGTGTCGT-GGCGGGCTGTGGCTGTAGCTATGGTGGTGG 124
||||| |||||||||||| ||||| | || || || |||||||||| |||||||||||||
Sbjct 1 AAAGCCGTAGAAGATGGCCAGTGTATTGTCGG-GGACTGTGGCTGTCGCTATGGTGGTGG 59
Query 125 TGTTGCTGTCATTGCAGTGGTTTGCAAAAGGGTACCCGGAAGAAGATTTGGTGGTGAGGC 184
||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct 60 TGTTGCTGTCAATGCAGTGGTTTGCAGATGGGTACCCAGAAGAAGATTTGGTGGTGAGGC 119
Query 185 TGCCAGGTCAACCAACTGTTGGGTTCAAACAATACGCAGGTTATGTCGATGTCGATGTGA 244
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 120 TGCCAGGTCAACCAACTGTTGGGTTCAGACAATACTCAGGTTATGTCGATGTCGATGTGA 179
Query 245 AAGCTGGTCGGAGTCTGTTCTATTACTATGTGGAGGCTGTGAAACAACCTGACTCAAAGC 304
|||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| |
Sbjct 180 AAGCTGGTCGGAGTCTGTTCTATTACTACGTGGAGGCTGTGAAACAACCAGACACAAAAC 239
Query 305 CATTGACCCTTTGGCTCAATGGAGGTCCAGGTTGTTCTTCAATTGGTGGAGGAGCTTTCA 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CATTGACCCTTTGGCTCAATGGAGGTCCAGGTTGTTCTTCAATTGGTGGAGGAGCTTTCA 299
Query 365 CTGAGTTGGGTCCATTTTACCCCACTGGCGATGGCCGTGGCCTTCGTGTTAACTCCATGT 424
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 300 CTGAGTTGGGTCCATTTTACCCCACTGGCGATGGCCGTGGCCTTCGCGTTAACTCCTTGT 359
Query 425 CTTGGAACAAAGCGTCGCACCTGCTTTTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTT 484
||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct 360 CTTGGAACAAAGCCTCGAACTTGCTTTTTGTGGAGTCACCGGCTGGAGTAGGATGGTCTT 419
Query 485 ACTCTAATAAAAGCTCTGATTACAACACCGGGGATAAGTCTACTGCAA-ACGATATGCTT 543
|||| || |||| ||||||||||||||||||| || ||||||| | | ||||||||
Sbjct 420 ACTCCAACCGAAGCACTGATTACAACACCGGGGACAAAACTACTGCTAGA-GATATGCTC 478
Query 544 GTGTTCTTGTTGAGATGGTTTGAGAAGTTCCCAAAGTTGAAGTCTCGGGATCTCTTTCTT 603
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 479 GTGTTCTTGTTGAGATGGTTTGACAAGTTCCCAAAGTTGAAGTCTCGGGACCTCTTTCTT 538
Query 604 ACTGGCGAAAGCTATGCAGGACATTACATACCTCAACTGGCTGATGCGATTCTCAGCTAC 663
||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||
Sbjct 539 ACTGGCGAAAGCTATGCTGGACATTACATACCGCAATTGGCTGATGCGATTCTCAGCTAC 598
Query 664 AATTCACACTCAAGTGGATTCAAATTCAACATCAAAGGCGTTGCTATTGGGAATCCACTT 723
||| ||||||| |||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 599 AATGCACACTCCAGTGGATTCAAATTCAACATTAAAGGCGTTGCAATCGGGAATCCACTA 658
Query 724 CTGAAGCTTGACAGAGACAGTCCAGCTACCTACGAGTTCTTCTGGTCGCATGGCATGATC 783
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 659 CTGAAACTTGACAGAGACAGTCCAGCTACGTACGAGTTCTTCTGGTCGCATGGGATGATT 718
Query 784 TCTGATGAACTAAAACTCACAATCACGAGTCAATGTGACTTTGATGATTACACATTTGCT 843
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 719 TCTGATGAACTCAAACTCACAATCACGAGCCAATGTGACTTTGATGATTACACATTTGCC 778
Query 844 AGCCCCCATAACGTAAGCACGGCCTGCAATGAAGCTATTAGTGAAACTGAAAACATTATC 903
|||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||
Sbjct 779 AGCCCCCATAACGTAAGCACGGCCTGCAATGATGCTATTAGTGAAACCGGAAACATCATC 838
Query 904 ACTGAGTATGTCAACAACTATGATGTTCTCCTCGATGTATGTTATCCGTCTATCGTCCAG 963
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 839 AGTGAGTATGTCAACAACTATGATGTTCTCCTCGACGTATGTTATCCGTCTATCGTCCAG 898
Query 964 CAAGAGCTGAGGCTCAAGAAAATGGCTACTAAAATGAGCATGGGAGTGGATGTGTGTATG 1023
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 899 CAAGAGCTGAGGCTCAAGAAAATGGCTACTAAACTGAGCTTGGGAGTGGATGTGTGTATG 958
Query 1024 ACCTATGAAAGACGGTTCTACTTTAATCTTCCAGAGGTACAAAAGGCGCTTCATGCGAAC 1083
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 959 ACCTATGAAAGACGGTTCTACTTTAACCTTCCAGAGGTACAAAAGGCGCTTCATGCGAAC 1018
Query 1084 CGTACTCATCTGCCTTATTCATGGTCAATGTGCAGCGG-CGTGTTAAACTACTCTGATAT 1142
|||||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |
Sbjct 1019 CGTACTCATCTGCCTTATGAATGGTCAATGTGCAGCGGTCA-GTTGAACTACTCTGACAC 1077
Query 1143 CGATGGGAACATCGACATGCTTCCGATTCTGAAGAGAATTATACTGAACAAAACTCCTAT 1202
||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1078 CGATGCGAATATCGACATGCTTCCGATTCTGAAGAGAATTATACAGAACAAAACTCCTGT 1137
Query 1203 TTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATTCGGGGGTTCAAGAACTCTCGT 1262
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1138 TTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATTCGTCGGTTCAAGAACTCTCGT 1197
Query 1263 AAGAGAACTTGCTCAAGATCTCAACTTCAAGACAACAGTTCCCTATGGAGCCTGGTTCCA 1322
||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 1198 AAGAGAACTTGCTCACGATCTCAACTTCGAGACCACAGTTCCCTACGGAGCCTGGTTCCA 1257
Query 1323 CAAAAGCCAGGTTGGAGGCTGGGCCATAGAGTATGGAAAACTACTGACGTTTGCAACGGT 1382
|||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 1258 CAAAAGTCAGGTTGGAGGCTGGGCCATTGAATACGGAAAACTACTGACGTTTGCAACGGT 1317
Query 1383 GAGAGGAGCGGCTCATATGGTACCGTATGCACAGCCCTCACGAGCTCTACATTTGTTCAG 1442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1318 GAGAGGAGCGGCTCATATGGTACCATATGCACAGCCCTCACGAGCTCTACATTTGTTCAG 1377
Query 1443 TAGCTTTGTAAGTGGCCGGAGATTACCCAACAACACACATTCTTCTACTGATGAATGAAA 1502
||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1378 TAGCTTTGTGAGTGGCCGGAGATTGCCCAACAACACACATTCTTCTACTGATGATTGAAA 1437
Query 1503 GAGCAGAGGTATATCTTTTGTAAGAAAAATGTAGTTTTTGTATTTAATTGATCTGTCTCA 1562
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1438 AAGCAGAGGTATATCTTTTGTAAGAAAAATGTAGTTT--GTATTTAATTTATCTGTCTCA 1495
Query 1563 GGCCTTAGATTAGTAGAGATAGAAACATGTAAAAGTTTGTGTTGTGGTTTGGTTGGATCT 1622
|||||||||| | ||| | | ||||||| |||||||||| |||||||||||||||
Sbjct 1496 GGCCTTAGAT--G-AGA-A-A----CATGTAAGGGTTTGTGTTGCGGTTTGGTTGGATCT 1546
Query 1623 TCAAGTGTAGTTTGTTTTAGTTATCTCAAACGTTGACAACAATTCTCTTTAGTTAATTAA 1682
||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |
Sbjct 1547 TCAAGTGTAGTTTGTTTTAGTTATCACAAACATTAACAACAATTCTCTTTAGATAATTTA 1606
Query 1683 TCTTAGTTATTGAATTAGTATTAACAATTATTGTATCACCATATTAttttttttA-CAAA 1741
||| ||| |||||| ||||| |||||| ||| |||||||||| || |||||||| |||
Sbjct 1607 TCTGAGTCATTGAACTAGTAACAACAATAATTTTATCACCATAATAATTTTTTTAACAAC 1666
Query 1742 TTTTGTCTATATGTTTTAGC 1761
||||||| ||||||||||||
Sbjct 1667 TTTTGTCAATATGTTTTAGC 1686
> Ahg494807 jgi|Araly1|494807|fgenesh2_kg.8__623__AT5G42230.1
Length=1458
Score = 1328 bits (719), Expect = 0.0
Identities = 1210/1446 (84%), Gaps = 38/1446 (3%)
Strand=Plus/Plus
Query 79 ATGGCGAG-TGTGTCGTGGCGGGCTGTGGCTGTAGCT-ATGGTGGTGGTGTTGCTGTCAT 136
|||||| | |||||||| || ||||| ||| | | |||| |||||| || || | |
Sbjct 1 ATGGCG-GCTGTGTCGTTACGCAATGTGGTTGT-GGTGATGGCAGTGGTGCTGGTGAC-T 57
Query 137 -TGCA-GTGGTTTGCAAAAGGGTACCCGGAAGAAGATTTGGTGGTGAGGCTGCCAGGTCA 194
|||| || ||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||
Sbjct 58 GTGCAGGT-GTTTGCACAAGGGTATCCGGAAGCAGATTTGGTTGTGAGGCTTCCAGGTCA 116
Query 195 ACCAACTGTTGGGTTCAAACAATACGCAGGTTATGTCGATGTCGATGTGAAAGCTGGTCG 254
|| || |||| ||||| ||| ||||| || || || ||| |||| |||| ||||| ||
Sbjct 117 ACTAAAGGTTGCGTTCAGACAGTACGCCGGGTACGTTGATCTCGACATGAATGCTGGGCG 176
Query 255 GAGTCTGTTCTATTACTAT-GTGGAGGCTGTGA-AACAACCTGACTCAAAGCCATTGACC 312
|| || ||||| |||| | |||||||||| | |||| |||||| |||| || | | |
Sbjct 177 TAGCCTTTTCTACTACT-TCGTGGAGGCTG-AAGAACACCCTGACACAAAACCGCT-AAC 233
Query 313 CTT-TGGCTCAATGGAGGTCCAGGTTGTTCTTCA-ATTGGTGGAGGAGCTTTCACTGAGT 370
||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 234 CTTGTGGCTCAATGGAGGTCCAGGTTGTTCTTCAGGTT-GTGGAGGAGCTTTCACTGAGC 292
Query 371 TGGGTCCATTTTACCCCACTGGCGATGGCCGTGGCCTTCGTGTTAACTCCATGTCTTGGA 430
| ||||||||||||||||| ||||||||| |||| ||||| |||||||||||||| ||||
Sbjct 293 TAGGTCCATTTTACCCCACAGGCGATGGCGGTGGTCTTCGCGTTAACTCCATGTCGTGGA 352
Query 431 ACAAAGCGTCGCACCTGCTTTTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTTACTCTA 490
||||||| ||| ||||||| |||||||||||||| | |||||| |||||||||||||| |
Sbjct 353 ACAAAGCATCGAACCTGCTGTTTGTGGAGTCACCGGTTGGAGTTGGATGGTCTTACTCCA 412
Query 491 ATAAAAGCTCTGATTACAACACCGGGGATAAGTCTACTGCAAACGATATGCTTGTGTTCT 550
| ||||||||||||||||||||| || ||||||||||| | ||||||||| |||||||
Sbjct 413 ACCGAAGCTCTGATTACAACACCGGTGACAAGTCTACTGCCAGCGATATGCTCGTGTTCT 472
Query 551 TGTTGAGATGGTTTGAGAAGTTCCCAAAGTTGAAGTCTCGGGATC-TCTTTCTTACTGGC 609
||||| ||||||| || ||||||||| |||| |||||||| || | ||||||| |||||
Sbjct 473 TGTTGGGATGGTTCGACAAGTTCCCAGAGTTCAAGTCTCGCGA-CTTCTTTCTCACTGGT 531
Query 610 GAAAGCTATGCAGGACATTACATACCTCAACTGGCTGATGCGATTCTCAGCTACAATTCA 669
|||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct 532 GAAAACTATGCAGGACATTACATACCGCAATTGGCTGATGCGATACTCAGCTACAATTCA 591
Query 670 CACTCAAGTGGATTCAAATTCAACATCAAAGGCGTTGCTATTGGGAATCCACTTCTGAAG 729
| ||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct 592 CGCTCAAGTGGGTTCAAATTCAACATCAAAGGCATTGCAATTGGGAATCCATTTCTGAAG 651
Query 730 CTTGACAGAGACAGTCC-AGCTACCTACGAGTTCTTCTGGTCGCATGGCATGATCTCTGA 788
|||||||||||| |||| |||| | | |||||||||||||||||| || |||||||||||
Sbjct 652 CTTGACAGAGAC-GTCCGAGCTGCATTCGAGTTCTTCTGGTCGCACGGGATGATCTCTGA 710
Query 789 TGAACTAAAACTCACAATCACGAGTCAATGTGACTTTGAT-GATTACACAT-T-TGCTAG 845
|||| | || |||||||| |||||| |||||| || | |||||||||| | | ||
Sbjct 711 TGAAGTGGGACACACAATCATGAGTCAGTGTGAC-TTCTTGGATTACACATATAT-ATA- 767
Query 846 CCCCCATAACGTAAGCACGGCCTGCAATGAAGCTATTAGTGAAACTGAAAACATTATCAC 905
||| |||||| |||| || ||||| || ||||| ||||| | | ||||| || ||
Sbjct 768 CCCGCATAACCTAAGTGTTGCATGCAACGACGCTATCCGTGAAGCCGGAAACAGCATTAC 827
Query 906 TGAGTATGTCAACAACTATGATGTTCTCCTCGATGTATGTTATCCGTCTATCGTCCAGCA 965
|||||||||||||||||||||| ||||||| || | || || || || || |||| | |
Sbjct 828 TGAGTATGTCAACAACTATGATTTTCTCCTGGACATTTGCTACCCCTCGATTGTCCTGAA 887
Query 966 AGAGCTGAGGCTCAAGAAAATGGCTACTAAA-ATGAGCATGGGAGTGGATGTGTGTATGA 1024
||| || ||||| ||| ||||||| || ||| |||||||||||||| ||||| |||||||
Sbjct 888 AGAACTTAGGCTTAAGCAAATGGCCAC-AAAGATGAGCATGGGAGTTGATGTCTGTATGA 946
Query 1025 CCTATGAAAGACGGTTCTACTTTAATCTTCCAGAGGTACAAAAGGCGCTTCATGCGAACC 1084
|||| ||||||| ||| || |||||||| ||||||||||| | |||||||||||||||||
Sbjct 947 CCTACGAAAGACAGTTATATTTTAATCTCCCAGAGGTACAGATGGCGCTTCATGCGAACC 1006
Query 1085 GTACTCATCTGCCTTATTCATGGTCAATGTGCAGCGGCGTGTTAAACTACTCTGATATCG 1144
| ||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||
Sbjct 1007 GCACTCATCTGCCATATTCATGGTCAATGTGCAGCAACCTGTTAAACTACTCTGGCATCG 1066
Query 1145 ATGGGAACATCGACATGCTTCCGATTCTGAAGAGAATTATACTGAACAAAACTCCTATTT 1204
||| |||||| |||||||||||| |||||||||| |||||| |||||||| |||| |||
Sbjct 1067 ATGCAAACATCAACATGCTTCCGACTCTGAAGAGAGTTATACAGAACAAAATTCCTGTTT 1126
Query 1205 GGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATT-CGGGGGTTCAAGAACTCTCGTA 1263
||||||||||||||||||||||||||||||||||||| | ||| || ||||| |||||
Sbjct 1127 GGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATTTCTGGGAA-CACGAACTGTCGTA 1185
Query 1264 AGAGAACTTGCTCAA-GATCTCAACTTCAAGACAACAGTTCCCTATGGAGCCTGGTTCCA 1322
|||||||| || ||| |||||||| |||||||| |||||||| ||||||| ||||||||
Sbjct 1186 AGAGAACTCGC-CAACGATCTCAATTTCAAGACGACAGTTCCATATGGAGTGTGGTTCCA 1244
Query 1323 CAAAAGCCAGGTTGGAGGCTGGGCCATAGAGTATGGAAA-ACTACTGACGTTTGCAACGG 1381
|||||| ||||||||||| |||||||| ||||||||||| | |||| || |||||||| |
Sbjct 1245 CAAAAGACAGGTTGGAGGTTGGGCCATCGAGTATGGAAACA-TACTCACTTTTGCAACAG 1303
Query 1382 TGAGAGGAGCGGCTCATATGGTACCGTATGCACAGCCCTCACGAGCTCTACATTTGTTCA 1441
||||||||||||||||| ||| || | | |||||||||| |||||| ||| | ||||
Sbjct 1304 TGAGAGGAGCGGCTCATGCGGTGGCGAACACGCAGCCCTCACAAGCTCTGCATCTATTCA 1363
Query 1442 GTAGCTTTGTAAGTGGCCGGAGATTACCCAACAACACACAT-TCTTCTACTG-ATGAATG 1499
| | |||| | |||||| ||||| |||||||| ||| || | ||| || |||| ||
Sbjct 1364 GCACCTTTCTTCGTGGCCATAGATTGCCCAACAAGACAGATATAG-CTA-TGCATGATTG 1421
Query 1500 AAAGAG 1505
||||||
Sbjct 1422 AAAGAG 1427
> Ahg331179 jgi|Araly1|331179|fgenesh1_pm.C_scaffold_8000522
Length=1419
Score = 1279 bits (692), Expect = 0.0
Identities = 1132/1345 (84%), Gaps = 28/1345 (2%)
Strand=Plus/Plus
Query 145 TTTGCAAAAGGGTACCCGGAAGAAGATTTGGTGGTGAGGCTGCCAGGTCAACCAACTGTT 204
|||||| | |||||||| |||| |||||| || |||| ||||||||| |||||||| ||
Sbjct 64 TTTGCAGATGGGTACCCAGAAGCAGATTTTGTTGTGAAGCTGCCAGGGCAACCAACGGTA 123
Query 205 GGGTTCAAACAATACGCAGGTTATGTCGATGTCGATGTGAAAGCTGGTCGGAGTCTGTTC 264
||||| ||| ||||| || ||||| ||| |||| | | ||| |||||||| ||
Sbjct 124 ACGTTCAGACAGTACGCCGGGTATGTTGATATCGACAAGGTTGTTGGGCGGAGTCTTTTT 183
Query 265 TATTACTAT-GTGGAGGCTGTGAAACAACCTGACTCAAAGCCATTGACCCTT-TGGCTCA 322
|| |||| | |||||||||| |||| |||||| |||| || || | | || |||||||
Sbjct 184 TACTACT-TCGTGGAGGCTGAAAAACGTCCTGACACAAAACCGTT-AACATTGTGGCTCA 241
Query 323 ATGGAGGTCCAGGTTGTTCTTCAATTGGTGGAGGAGCTTTCACTGAGTTGGGTCCATTTT 382
|||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||
Sbjct 242 ATGGAGGTCCAGGTTGTTCTTCTGTTGGTGGAGGAGCTTTCACTGAGCTAGGTCCATTTT 301
Query 383 ACCCCACTGGCGATGGCCGTGGCCTTCGTGTTAACTCCATGTCTTGGAACAAAGCGTCGC 442
||||||| ||||||||||||||||| || ||||||||||||| ||||||||||| |||
Sbjct 302 ACCCCACAGGCGATGGCCGTGGCCTCCGCATTAACTCCATGTCGTGGAACAAAGCATCGA 361
Query 443 ACCTGCTTTTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTTACTCTAATAAAAGCTCTG 502
||||||| |||||||| ||||| |||||||| |||||||| ||||| || |||||||||
Sbjct 362 ACCTGCTATTTGTGGACTCACCGGCTGGAGTTGGATGGTCATACTCCAACCAAAGCTCTG 421
Query 503 ATTACAACACCGGGGATAAGTCTACTGCAAACGATATGCTTGTGTTCTTGTTGAGATGGT 562
|||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||
Sbjct 422 ATTACAACACCGGGGACGAGTCTGCTGCCAGTGATATGCTTGTGTTCTTGTTGAGATGGT 481
Query 563 TTGAGAAGTTCCC-AAAGTTGAAGTCTCGGGATCTCTTTCTTACTGGCGAAAGCTATGCA 621
| || |||||||| || ||||||||||| || |||||||| || ||||||||||||||
Sbjct 482 TCGATAAGTTCCCGGAA-TTGAAGTCTCGCGACCTCTTTCTCACAGGCGAAAGCTATGCT 540
Query 622 GGACATTACATACCTCAACTGGCTGATGCGATTCTCAGCTACAATTCACACTCAAGTGGA 681
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 541 GGACATTACATACCTCAACTGGCTGATGCGATTCTCAGCTACAATTCACACTCGAGCGGG 600
Query 682 TTCAAATTCAACATCAAAGGCGTTGCTATTGGGAATCCACTTCTGAAGCTTGACAGAGAC 741
||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||
Sbjct 601 TTCAAATTCAACATCAAAGGCATTGCGATTGGGAATCCACTTCTTAAGCTTGACAGGGAC 660
Query 742 AGTCCAGCTACCTACGAGTTCTTCTGGTCGCATGGCATGATCTCTGATGA-ACTAAAACT 800
| ||||||| |||||||||||||||||||||||||||||||||||| | | | ||
Sbjct 661 ATTCCAGCTGTATACGAGTTCTTCTGGTCGCATGGCATGATCTCTGAT-ATAGTGGGACG 719
Query 801 CACAATCACGAGTCAATGTGACTT-TGATGATTACACATTTGC-TAGCCCCCATAACGTA 858
|||||||| ||||||||||||||| | | ||||||| | ||| || ||| ||||||| |
Sbjct 720 CACAATCAGGAGTCAATGTGACTTCTCAC-ATTACACGTATGCGTA-CCCACATAACGCA 777
Query 859 AGC-ACGGCCTGCAATGAAGCTATTAGTGAAACTGAAAACATTATCACTGAGTATGTCAA 917
|| | | | ||||| || |||| | |||| | | || | | |||||||| ||||||||
Sbjct 778 AGTGATG-CTTGCAACGACGCTACCACTGAAGCGGGAATCGTCATCACTGAATATGTCAA 836
Query 918 CAACTATGATGTTCTCCTCGATGTATGTTATCCGTCTATCGTCC-AGCAAGAGCTGAGGC 976
||||| |||||||||||| || | || || ||||| || |||| | ||||| || ||||
Sbjct 837 CAACTTTGATGTTCTCCTTGACATTTGCTACCCGTCAATTGTCCTA-CAAGAACTAAGGC 895
Query 977 TCAAGAAAATGGCTACTAAA-ATGAGCATGGGAGTGGATGTGTGTATGACCTATGAAAGA 1035
||||| ||||||| || ||| |||||||||||||||||||| ||| ||||||| ||||||
Sbjct 896 TCAAGCAAATGGCCAC-AAAGATGAGCATGGGAGTGGATGTCTGTTTGACCTACGAAAGA 954
Query 1036 CGGTTCTACTTTAATCTTCCAGAGGTACAAAAGGCGCTTCATGCGAACCGTACTCATCTG 1095
| ||||||||||||||| ||||||||||| | ||||||||| || ||||| |||||||||
Sbjct 955 CAGTTCTACTTTAATCTCCCAGAGGTACAGATGGCGCTTCACGCAAACCGCACTCATCTG 1014
Query 1096 CCTTATTCATGGTCAATGTGCAGCGGCGTGTTAAACTACTCTGATATCGATGGGAACATC 1155
|||||| |||||| |||||||| | ||||||||||||||| ||||||| |||| |
Sbjct 1015 CCTTATGAATGGTCTTTGTGCAGCAACCTGTTAAACTACTCTGGCATCGATGTAAACACC 1074
Query 1156 GACATGCTTCCGATTCTGAAGAGAATTATACTGAACAAAACTCCTATTTGGATCTTCAGT 1215
||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct 1075 AACATGCTTCCGCCTCTGAAGAGAATTATACAGAACAAAATTCCGGTTTGGATCTTCAGT 1134
Query 1216 GGAGATCAAGATTCTGTAGTTCCATT-CGGGGGTTCAAGAACTCTCGTA-AGAGAACTTG 1273
|||||||||||||| ||||||||||| | || |||||||| ||||| | |||||| |
Sbjct 1135 GGAGATCAAGATTCGGTAGTTCCATTTCTTGGAA-CAAGAACTGTCGTACA-AGAACTCG 1192
Query 1274 CTCAA-GATCTCAACTTCAAGACAACAGTTCCCTATGGAGCCTGGTTCCACAAAAGCCAG 1332
| | | |||||||| |||||||| |||||||| ||||||| |||||||| ||||| |||
Sbjct 1193 C-CGACGATCTCAATTTCAAGACGACAGTTCCATATGGAGTGTGGTTCCATAAAAGACAG 1251
Query 1333 GTTGGAGGCTGGGCCATAGAGTATGGAAAACTACTGACGTTTGCAACGGTGAGAGGAGCG 1392
||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 1252 GTTGGAGGCTGGGCCATCGAGTATGGAAACCTACTCACGTTTGCAACAGTGAGAGGAGCG 1311
Query 1393 GCTCATATGGTACCGTATGCA--CAGCCCTCACGAGCTCTACATTTGTTCAGTAGCTTTG 1450
|||||| ||| |||| || |||||||| |||||||| ||| ||||||| | |||||
Sbjct 1312 GCTCATGCGGTGGCGTA--CAAGCAGCCCTCTCGAGCTCTGCATCTGTTCAGCACCTTTG 1369
Query 1451 TAAGTGGCCGGAGATTACCCAACAA 1475
| |||| | |||||| || |||||
Sbjct 1370 TGCGTGGACAGAGATTGCCTAACAA 1394
> Ahg497456 jgi|Araly1|497456|fgenesh2_kg.482__1__AT5G42230.1
Length=1390
Score = 784 bits (424), Expect = 0.0
Identities = 717/858 (84%), Gaps = 21/858 (2%)
Strand=Plus/Plus
Query 657 CAGCTACAATTCACACTCAAGTGGATTCAAATTCAACATCAAAGGCGTTGCTATTGGGAA 716
|||||||||||||| |||||| || ||| ||||||||||||||||| |||| ||||||||
Sbjct 517 CAGCTACAATTCACGCTCAAGGGGGTTC-AATTCAACATCAAAGGCATTGCAATTGGGAA 575
Query 717 TCCACTTCTGAAGCTTGACAGAGACAGTCC-AGCTACCTACGAGTTCTTCTGGTCGCATG 775
|||| |||||||||||||||||||| |||| |||| | | |||||||||||||||||| |
Sbjct 576 TCCATTTCTGAAGCTTGACAGAGAC-GTCCGAGCTGCATTCGAGTTCTTCTGGTCGCACG 634
Query 776 GCATGATCTCTGATGAACTAAAACTCACAATCACGAGTCAATGTGACTTTGAT-GATTAC 834
| ||||||||||||||| | || |||||||| |||||| |||||| || | ||||||
Sbjct 635 GGATGATCTCTGATGAAGTGGGACACACAATCATGAGTCAGTGTGAC-TTCTTGGATTAC 693
Query 835 ACAT-T-TGCTAGCCCCCATAACGTAAGCACGGCCTGCAATGAAGCTATTAGTGAAACTG 892
|||| | | || ||| |||||| |||| || ||||| || ||||| ||||| | |
Sbjct 694 ACATATAT-ATA-CCCGCATAACCTAAGTGTTGCATGCAACGACGCTATCCGTGAAGCCG 751
Query 893 AAAACATTATCACTGAGTATGTCAACAACTATGATGTTCTCCTCGATGTATGTTATCCGT 952
||||| || |||||||||||||||||||||||| ||||||| || | || || || |
Sbjct 752 GAAACAGCATTACTGAGTATGTCAACAACTATGATTTTCTCCTGGACATTTGCTACCCCT 811
Query 953 CTATCGTCCAGCAAGAGCTGAGGCTCAAGAAAATGGCTACTAAA-ATGAGCATGGGAGTG 1011
| || |||| | |||| || ||||| ||| ||||||| || ||| ||||||||||||||
Sbjct 812 CGATTGTCCTGAAAGAACTTAGGCTTAAGCAAATGGCCAC-AAAGATGAGCATGGGAGTT 870
Query 1012 GATGTGTGTATGACCTATGAAAGACGGTTCTACTTTAATCTTCCAGAGGTACAAAAGGCG 1071
||||| ||||||||||| ||||||| ||| || |||||||| ||||||||||| | ||||
Sbjct 871 GATGTCTGTATGACCTACGAAAGACAGTTATATTTTAATCTCCCAGAGGTACAGATGGCG 930
Query 1072 CTTCATGCGAACCGTACTCATCTGCCTTATTCATGGTCAATGTGCAGCGGCGTGTTAAAC 1131
|||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||
Sbjct 931 CTTCATGCGAACCGCACTCATCTGCCATATTCATGGTCAATGTGCAGCAACCTGTTAAAC 990
Query 1132 TACTCTGATATCGATGGGAACATCGACATGCTTCCGATTCTGAAGAGAATTATACTGAAC 1191
||||||| ||||||| |||||| |||||||||||| |||||||||| |||||| ||||
Sbjct 991 TACTCTGGCATCGATGCAAACATCAACATGCTTCCGACTCTGAAGAGAGTTATACAGAAC 1050
Query 1192 AAAACTCCTATTTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATT-CGGGGGTTC 1250
|||| |||| |||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct 1051 AAAATTCCTGTTTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCATTTCTGGGAA-C 1109
Query 1251 AAGAACTCTCGTAAGAGAACTTGCTCAA-GATCTCAACTTCAAGACAACAGTTCCCTATG 1309
| ||||| ||||||||||||| || ||| |||||||| |||||||| |||||||| ||||
Sbjct 1110 ACGAACTGTCGTAAGAGAACTCGC-CAACGATCTCAATTTCAAGACGACAGTTCCATATG 1168
Query 1310 GAGCCTGGTTCCACAAAAGCCAGGTTGGAGGCTGGGCCATAGAGTATGGAAA-ACTACTG 1368
||| |||||||||||||| |||||||||||||||||||| || |||||||| | ||||
Sbjct 1169 GAGTGTGGTTCCACAAAAGACAGGTTGGAGGCTGGGCCATCGATTATGGAAACA-TACTC 1227
Query 1369 ACGTTTGCAACGGTGAGAGGAGCGGCTCATATGGTACCGTATGCACAGCCCTCACGAGCT 1428
|| |||||||| |||||||||||||||||| ||| || | | |||||||||||||||
Sbjct 1228 ACTTTTGCAACAGTGAGAGGAGCGGCTCATGCGGTGGCGAACACGCAGCCCTCACGAGCT 1287
Query 1429 CTACATTTGTTCAGTAGCTTTGTAAGTGGCCGGAGATTACCCAACAACACACAT-TCTTC 1487
|| ||| | ||||| | |||| | |||||| ||||| |||||||| ||| || | |
Sbjct 1288 CTGCATCTATTCAGCACCTTTCTTCGTGGCCATAGATTGCCCAACAAGACAGATATAG-C 1346
Query 1488 TACTG-ATGAATGAAAGA 1504
|| || |||| |||||||
Sbjct 1347 TA-TGCATGATTGAAAGA 1363
Score = 350 bits (189), Expect = 3e-95
Identities = 440/554 (79%), Gaps = 45/554 (8%)
Strand=Plus/Plus
Query 79 ATGGCGAG-TGTGTCGTGGCGGGCTGTGGCTGTAGCT-ATGGTGGTGGTGTTGCTGTCAT 136
|||||| | |||||||| || ||||| ||| | | |||| |||||| || || | |
Sbjct 1 ATGGCG-GCTGTGTCGTTACGCAATGTGGTTGT-GGTGATGGCAGTGGTGCTGGTGAC-T 57
Query 137 -TGCA-GTGGTTTGCAAAAGGGTACCCGGAAGAAGATTTGGTGGTGAGGCTGCCAGGTCA 194
|||| || ||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||
Sbjct 58 GTGCAGGT-GTTTGCACAAGGGTATCCGGAAGCAGATTTGGTTGTGAGGCTTCCAGGTCA 116
Query 195 ACCAACTGTTGGGTTCAAACAATACGCAGGTTATGTCGATGTCGATGTGAAAGCTGGTCG 254
|| || |||| ||||| ||| ||||| || || || ||| |||| |||| ||||| ||
Sbjct 117 ACTAAAGGTTGCGTTCAGACAGTACGCCGGGTACGTTGATCTCGACATGAATGCTGGGCG 176
Query 255 GAGTCTGTTCTATTACTAT-GTGGAGGCTGTGA-AACAACCTGACTCAAAGCCATTGACC 312
|| || ||||| |||| | |||||||||| | |||| |||||| |||| || | | |
Sbjct 177 TAGCCTTTTCTACTACT-TCGTGGAGGCTG-AAGAACACCCTGACACAAAACCGCT-AAC 233
Query 313 CTT-TGGCTCAATGGAGGTCCAGGTTGTTCTTCAA-TTGGTGGAGGAGCTTTCACTGAGT 370
||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 234 CTTGTGGCTCAATGGAGGTCCAGGTTGTTCTTCAGGTTG-TGGAGGAGCTTTCACTGAGC 292
Query 371 TGGGTCCATTTTACCCCACTGGCGATGGCCGTGGCCTTCGTGTTAACTCCATGTCTTGGA 430
| ||||||||||||||||| ||||||||| |||| ||||| | | || | | |
Sbjct 293 TAGGTCCATTTTACCCCACAGGCGATGGCGGTGGTCTTCG------C-C-AT--C--G-A 339
Query 431 ACAAAGCGTCGCACCTGCTTTTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTTACTCTA 490
|| | | || || ||| ||||||| ||| | |||||| |||||||||||||| |
Sbjct 340 AC----C-T-GC---TG-TTT--GTGGAGTGACCGGTTGGAGTTGGATGGTCTTACTCCA 387
Query 491 A-TAAAAGCTCTGATTACAACACCGGGGATAAGTCTACTGCAAACGATATGCTTGTGTTC 549
| | || ||||||||||||||||||| || ||||||||||| | ||||||||| ||||||
Sbjct 388 ACTGAA-GCTCTGATTACAACACCGGTGACAAGTCTACTGCCAGCGATATGCTCGTGTTC 446
Query 550 TTGTTGAGATGGTTTGAGAAGTTCCCAAAGTTGAAGTCTCGGGATCT-CTTTCTTACTGG 608
|||||| ||||||| || ||||||||| |||| |||||||| || || |||||| |||||
Sbjct 447 TTGTTGGGATGGTTCGACAAGTTCCCAGAGTTCAAGTCTCGCGA-CTTCTTTCTCACTGG 505
Query 609 CGAAAGCTATGCAG 622
|||| ||||||||
Sbjct 506 TGAAAACTATGCAG 519
> Ahg913585 jgi|Araly1|913585|Al_scaffold_0001_3839
Length=1440
Score = 782 bits (423), Expect = 0.0
Identities = 1009/1288 (78%), Gaps = 55/1288 (4%)
Strand=Plus/Plus
Query 208 TTCAAACAATACGCAGGTTATGTCGATGTCGATGTGAAAGCTGGTCGGAGTCTGTTCTAT 267
|||| ||||| ||| |||||||||||| ||||||| ||||||||||||||||| || |||
Sbjct 145 TTCAGACAATTCGCGGGTTATGTCGATATCGATGTCAAAGCTGGTCGGAGTCTCTTTTAT 204
Query 268 TACTAT-GTGGAGGCTGTGAAACAACCTGACTC-AAAGCCATTGACCCTTTGGCTCAATG 325
|||| | || || || | ||| ||||| |||| ||| || || ||||||||||||||||
Sbjct 205 TACT-TCGTCGAAGCCGAGAAGCAACCCCACTCTAAA-CCTTTAACCCTTTGGCTCAATG 262
Query 326 GAGGTCCAGGTTGTTCTTCAATTGGTGGAGGAGCTTTCACTGAGTTGGGTCCATTTTACC 385
|||| ||||| |||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct 263 GAGGACCAGGCTGTTCTTCCATAGGAGGAGGAGCTTTTACAGAGTTGGGTCCATTTTACC 322
Query 386 CCACT-GGCGATGGCCGTGGCCTTCGTGTTAACT-CCATGTCTTGGAACAAAGCGTCGCA 443
||| | || |||| |||||||| || || | ||| |||||||||||||| || |
Sbjct 323 CCA-TCGGAAATGGTCGTGGCCTCCG-CAGAAATCCCAAATCTTGGAACAAAGCCTCAAA 380
Query 444 CCTGCTT-TTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTTACTCTAATAAAAGC-TCT 501
|| || |||||||| ||||| |||||||||||||||||||| || |||| || | |||
Sbjct 381 TCT-ATTGTTTGTGGATTCACCGGCTGGAGTAGGATGGTCTTATTCGAATACAA-CTTCT 438
Query 502 GATTACAACACCGGGGAT-AAGTCTACTGCAAACGATATGCTTGTGTTCTTGTTGAGATG 560
||||||| ||| || ||| || || ||||| || |||||||| |||||| |||| |||||
Sbjct 439 GATTACACCACTGGCGATGAA-TCCACTGCCAAGGATATGCTGGTGTTCATGTTAAGATG 497
Query 561 GTTTGAGAAGTTCCCA-AAGTTGAAGTCTCGGGATCTCTTTCTTACTGGCGAAAGCTATG 619
||| || || || ||| || || ||| |||| | |||||||| |||||||||||||||
Sbjct 498 GTTAGAAAAATTTCCACAA-TTCAAGACTCGAAACCTCTTTCTCGCTGGCGAAAGCTATG 556
Query 620 CAGGACATTACATACCTCAACTGGCTGATGCGATTC-TCAGCTACAATTC-AC-A--CTC 674
||||||| |||||||||||| | ||||||| ||| | | | ||||| | || | | |
Sbjct 557 CAGGACACTACATACCTCAATTAGCTGATGTGATACTTGA-ATACAA-CCAACAACGCAC 614
Query 675 AAGTGGATTCAAATTCAA-CATCAAAGGCG-TTGCTATTGGGAATCCACTTCTGAAGCTT 732
|| ||||||| ||||| | ||||||| | |||| || |||||||||||| ||||||||
Sbjct 615 AAACAGATTCAAGTTCAATC-TCAAAGG-GATTGCAATCGGGAATCCACTTTTGAAGCTT 672
Query 733 GACAGAGACAGTCCAGCTACCTACGAGTTCTTCTGGTCGCATGGCATGATCTCTGATGAA 792
||| | || | |||||| | || |||||||||||||| || || ||||| |||||||||
Sbjct 673 GACCGCGATATTCCAGCGATGTATGAGTTCTTCTGGTCACACGGGATGATATCTGATGAA 732
Query 793 CTAAAACTCACAATCACGAGTCAATGTGACTTTGATGATTACACATTTGCTA-GCCCCCA 851
|| ||||| || | || ||||| |||||||| |||||| |||| | | | | ||
Sbjct 733 CTTGGCCTCACTATTATGAACCAATGCGACTTTGAAGATTACTCATTCAC-AGGTTCGCA 791
Query 852 TAACGTAAGCACGGCCTGC-AATGAAGCTATTAGTGAAACTGAAAACATTATCACTGAGT 910
||| |||||| | ||| || | || | ||| || | | || ||| |||||| | |
Sbjct 792 CAACATAAGCAAATCTTGCGAA-GCCGCGGTGAGTCAAGCCGGAACCATCATCACTCAAT 850
Query 911 ATGTCAACAACTATGATGTTCTCCTCGATGTATGTTATCCGTCTATCGTCCAGCAAGAGC 970
||||||| |||| || | || |||||| | || || || || || || |||||||||
Sbjct 851 ATGTCAATTACTACGACATCCTTCTCGATATCTGCTACCCCTCCCTCTTCGAGCAAGAGC 910
Query 971 TGAGGCTCAAGAAAATGGCTACTAAA-ATGAG-CATGGGAGTGGATGTGTGTATGACCTA 1028
| |||||||||||||||| ||| ||| ||||| |||| ||||| ||||| |||| ||
Sbjct 911 TCAGGCTCAAGAAAATGGGTAC-AAAGATGAGTTTTGGG-GTGGACGTGTGCATGAGTTA 968
Query 1029 TGAAAGA-CGGTTCTACTTTAA-TCTTCCAGAGGTACAAAAGGCGCTTCATGCGAACCGT 1086
|| |||| | || || ||||| |||||| ||||| |||||||| || ||||| || ||
Sbjct 969 TG-AAGAGCAATTGTA-TTTAACTCTTCCTGAGGTTCAAAAGGCTCTCCATGCTAATCGA 1026
Query 1087 ACTCATCTGCCTTATTC-ATGGTCAATGTGCAGCGGCGTGTT-AAACTACTCTGATATC- 1143
||||| ||||| || || |||||| ||||| ||| || | || ||| ||| | | | |
Sbjct 1027 ACTCAACTGCCATA-TCAATGGTCTATGTGTAGCAGCCTCTTGAAA-TACAATTACA-CT 1083
Query 1144 GATGGGAACATCGACATGCTTCCGATTCTGAAGAGAAT--TATACTGAACAAAACTCC-T 1200
|| ||||||| | | |||||||| ||||| ||||| || | || || | ||| ||| |
Sbjct 1084 GACGGGAACACCAATATGCTTCCAATTCTTAAGAGGATCGT-TA-AGAGC-AAAGTCCAT 1140
Query 1201 ATTTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCA-TTCGGGGGTTCAAGAACTCT 1259
||||| |||||||||| ||| ||||||||||| ||||| ||| || ||||| ||| |
Sbjct 1141 GTTTGGGTCTTCAGTGGGGATGAAGATTCTGTAATTCCACTTC-TTGGATCAAGGACTTT 1199
Query 1260 CGTAAGAGAACTTGCTCAAGATCTCAACTTCAAGACAACAGTTCCCTATGGAGCCTGGTT 1319
|||| ||||||||| | |||||||||||||| || ||||||||||||||||| |||||
Sbjct 1200 GGTAAAAGAACTTGCAGATGATCTCAACTTCAATACCACAGTTCCCTATGGAGCTTGGTT 1259
Query 1320 CCACAAAAGCCAGGTTGGAGGCTGGGCCATAGAGTATGGAAAACTACTGACGTTTGCAAC 1379
||||| | |||||||| || |||| ||||||||||| || ||| |||| || |||||
Sbjct 1260 TGACAAAGGACAGGTTGGCGGATGGGTAATAGAGTATGGGAATCTAGTGACATTCGCAAC 1319
Query 1380 GGTGAGAGGAGCGGCTCATATGGTACCGTA-TGCACAGCCCTCACGAGCTCTACATTTGT 1438
|||||||||||||||||||||||| || || | | ||||| ||||||||| | |||||||
Sbjct 1320 GGTGAGAGGAGCGGCTCATATGGTGCCTTACT-CGCAGCCTTCACGAGCTTTGCATTTGT 1378
Query 1439 TCAGTAGCTTTGTAAGTGGCCGGAGATT 1466
||| |||||||| ||||||||||||
Sbjct 1379 TCACCAGCTTTGTGCTTGGCCGGAGATT 1406
> Ahg906053 jgi|Araly1|906053|Al_scaffold_0003_3181
Length=1356
Score = 769 bits (416), Expect = 0.0
Identities = 714/854 (84%), Gaps = 36/854 (4%)
Strand=Plus/Plus
Query 143 GGTTTGCAAAAGGGTACCCGGAAGAAGATTTGGTGGTGAGGCTGCCAGGTCAACC-AACT 201
||||||| |||| || |||||||||||| |||||||||||||||| |||||||| ||
Sbjct 89 GGTTTGCTGAAGGTTATCCGGAAGAAGATATGGTGGTGAGGCTGCCTGGTCAACCGAA-G 147
Query 202 GTTGGGTTCAAACAATACGCAGGTTATGTCGATGTCGA-T-GTGA-AAGCTGGTCGGAGT 258
|| ||||||| ||||| ||| || ||||||||||| || | | || || |||||| |||
Sbjct 148 GTCGGGTTCAGACAATTCGCTGGATATGTCGATGTGGACTCG-GAGAA--TGGTCGTAGT 204
Query 259 CTGTTCTATTACTATGTGGAGGCTGTGAAACAACCTGACTCAAAGCCATTGACCCTTTGG 318
|| || || |||||||| |||||||| ||| |||||||| | ||||| || |||||||||
Sbjct 205 CTTTTTTACTACTATGTTGAGGCTGTAAAAGAACCTGACACTAAGCCCTTAACCCTTTGG 264
Query 319 CTCAATGGAGGTCCAGGTTGTTCTTCAATTGGTGGAGGAGCTTTCACTGAGTTGGGTCCA 378
||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||||
Sbjct 265 CTCAATGGAGGTCCAGGTTGTTCTTCAGTTGGTGGAGGAGATTTCACTAAGTTAGGTCCA 324
Query 379 TTTTACCCCACTGGCGATGGCCGTGGCCTTCGTGTT-AACTCCATGTCTTGGAACAAAGC 437
||||||||||| || |||||||||||||| || || |||||||||||||||||||||||
Sbjct 325 TTTTACCCCACGGGTGATGGCCGTGGCCTCCGC-TTGAACTCCATGTCTTGGAACAAAGC 383
Query 438 GTCGCACCTGCTTTTTGTGGAGTCACCTGCTGGAGTAGGATGGTCTTACTCTAATAAAAG 497
||| ||||||| |||||||||||||| || | |||||||||||| |||||||| | |||
Sbjct 384 CTCGAACCTGCTATTTGTGGAGTCACCAGCCGTAGTAGGATGGTCATACTCTAACAGAAG 443
Query 498 CTCTGATTACAACACCGGGGATAAGTCTACTGCAAACGATATGCTTGTGTTCTTGTTGAG 557
|||| |||| ||||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct 444 CTCTAATTATAACACCGGGGACAAGTCTACTGCCAATGATATGCTTGTGTTCTTATTGAG 503
Query 558 ATGGTTTGAGAAGTTCCCAA-AGTTGAAGTCTCGGGATCTCTTTCTTACTGGCGAAAGCT 616
|||||| | ||||||| || ||||||||||||| || |||||||| |||||||||||||
Sbjct 504 ATGGTTCAACAAGTTCC-AAGAGTTGAAGTCTCGCGACCTCTTTCTCACTGGCGAAAGCT 562
Query 617 ATGCAGGACATTACATACCTCAACTGGCTGATGCGATTCTCAGCTACAATTCACACTCAA 676
| ||||| || |||||||||||||||||||||| ||| |||||||||||||||| |||||
Sbjct 563 ACGCAGGGCACTACATACCTCAACTGGCTGATGTGATACTCAGCTACAATTCACGCTCAA 622
Query 677 GTGGATTCAAATTCAACATCAAAGGCGTTGCTATTGGGAATCCACTTCTGAAGCTTGACA 736
||| |||||||| ||| |||||||| |||| ||||| ||||||||||||||||||||||
Sbjct 623 ATGGGTTCAAATTTAACGTCAAAGGCATTGCAATTGGCAATCCACTTCTGAAGCTTGACA 682
Query 737 GAGACAGTC-CAGCTACCTACGAGTTCTTCTGGTCGCATGGCATGATCTCTGATGAACTA 795
| || || ||||| | ||||||| ||||||||||||||| ||||||||||||||| ||
Sbjct 683 GGGAT-GTTGCAGCTGCATACGAGTACTTCTGGTCGCATGGGATGATCTCTGATGAAGTA 741
Query 796 AAACTCACAATCACGAGTCAATGTGACTTTGATGATTACACATTTGCTAGCCCCCATAAC 855
| ||||||||||| || ||||||||||||| || || | | | | || |
Sbjct 742 AGACTCACAATCATGAACCAATGTGACTTTGCCAATC-CAAA---GA-A-C----ATGA- 790
Query 856 GTAA-GCACGGCCTGCAATGAAGCTATTAGT-GAAACTGAAAACATTATCACTGAGTATG 913
|||| || | | || || |||| || || || || | | |||||||||||
Sbjct 791 GTAATGCTTGTA-TACA-TG---CTATC-GTTGA--CTCAAG-CGTCCTCACTGAGTATA 841
Query 914 TCAACAACTATGATGTTCTCCTCGATGTATGTTATCCGTCTATCGTCCAGCAAGAGCTGA 973
|||| | |||| |||||||||| ||||||||||| || ||||| ||||||||||||||||
Sbjct 842 TCAATAGCTATCATGTTCTCCTTGATGTATGTTACCCTTCTATTGTCCAGCAAGAGCTGA 901
Query 974 GGCTCAAGAAAATG 987
||||||||||||||
Sbjct 902 GGCTCAAGAAAATG 915
Score = 425 bits (230), Expect = 4e-118
Identities = 354/413 (86%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 1069 GCGCTTCATGCGAACCGTACTCATCTGCCTTATTCA-TGGTCAATGTGCAGC-GGCGTGT 1126
|||||||| || ||||| |||| || ||||| | | ||| | ||||||||| || ||
Sbjct 919 GCGCTTCACGCAAACCGCACTCGCCTACCTTA-TGAGTGGACTATGTGCAGCAACCG-GT 976
Query 1127 TAAACTACTCTGATATCGATGGGA-ACATCGACATGCTTCCGATTCTGAAGAGAATTATA 1185
|||||||| || |||||| ||| |||||||||||||||||||||| ||||||||||||
Sbjct 977 TAAACTACAGTGGCATCGAT-GGATACATCGACATGCTTCCGATTCTTAAGAGAATTATA 1035
Query 1186 CTGAACAAAACTCCTATTTGGATCTTCAGTGGAGATCAAGATTCTGTAGTTCCA-TTCGG 1244
| |||| |||||||| ||||||||||||||||||| |||||||||||| ||||| |||
Sbjct 1036 CAGAACCAAACTCCTGTTTGGATCTTCAGTGGAGACCAAGATTCTGTAATTCCACTTC-A 1094
Query 1245 GGGTTCAAGAACTCTCGTAAGAGAACTTGCTCAAGATCTCAACTTCAAGACAACAGTTCC 1304
|||||||||| | |||| ||||||||||||| ||||||||||||||||| || |||||
Sbjct 1095 AAGTTCAAGAACACGCGTACGAGAACTTGCTCAGGATCTCAACTTCAAGACCACTGTTCC 1154
Query 1305 CTATGGAGCCTGGTTCCACAAAAG-CCAGGTTGGAGGCTGGGCCATAGAGTATGGAAAAC 1363
||||||||||||||||||| |||| |||||||| ||||||| || ||||||||| || |
Sbjct 1155 CTATGGAGCCTGGTTCCAC-AAAGAACAGGTTGGTGGCTGGGTCACAGAGTATGGGAATC 1213
Query 1364 TACTGACGTTTGCAACGGTGAGAGGAGCGGCTCATATGGTA-CCGTATGCACAGCCCTCA 1422
||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 1214 TACTGACCTTTGCAACGGTGAGAGGAGCGGCTCATATGGTGGCC-TATGCGGAGCCCTCA 1272
Query 1423 CGAGCTCTACATTTGTTCAGTAGCTTTGTAAGTGGCCGGAGATTACCCAACAA 1475
|||||||| || ||||||||| |||||| | |||||||||||| ||||||||
Sbjct 1273 CGAGCTCTGCACATGTTCAGTACCTTTGTGACTGGCCGGAGATTGCCCAACAA 1325
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66086575075
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5