BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G42270.1 Length=2480 Score E Sequences producing significant alignments: (Bits) Value Ahg494803 jgi|Araly1|494803|fgenesh2_kg.8__619__AT5G42270.1 3465 0.0 Ahg923463 jgi|Araly1|923463|scaffold_104744.1 1718 0.0 > Ahg494803 jgi|Araly1|494803|fgenesh2_kg.8__619__AT5G42270.1 Length=2326 Score = 3465 bits (1876), Expect = 0.0 Identities = 2163/2297 (94%), Gaps = 37/2297 (2%) Strand=Plus/Plus Query 1 GTAGACGAACCTGAAGCAATCACTCAAACTCAAGACTTCTCTTTAATCCTCCTCCCAAAA 60 |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct 1 GTAGACGAACCTCAAGCAATCACTCAAACTCATGACTTCTCTTTAATCCTCCTCCAAAAA 60 Query 61 A--TC----T-CAGAGAATCCTCCTTC-AATTCCAATTCAAAGCTCCTTCCTTTTTTCAC 112 | || | ||||||| |||||||| |||| |||||||||| ||||||| |||||||| Sbjct 61 ATCTCAATTTGCAGAGAAACCTCCTTCAAATT-CAATTCAAAGATCCTTCC-TTTTTCAC 118 Query 113 ATCTCTCTTCTTCAAATTCAATCATCATAAAAATCGAATCTTTATTCTTCAGAGAGCTTC 172 | || |||||| ||||| ||| | ||| | || ||||||||||||||||| Sbjct 119 --CACT-TTCTTC---TTCAA-AATC-T---AAT----T-TTGATTCTTCAGAGAGCTTC 162 Query 173 AATGGCGACCACATCATCAAACCCATTACTACTTTCTTCAAATTTCCTCGGTTCTCAAAT 232 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 163 AATGGCGACCACATCTTCAAACCCATTACTACTTTCTTCAAATTTCCTCGGTTCTCAAAT 222 Query 233 TATAATCTCAGCTCCAACACCAAAAACCACCACAAAGTCTCTTCCTTTCTCAGTAATCTC 292 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 223 CATAATCTCAGCTCCAACACCAAAAACCACCACAAAGTCTCTTCCTTTCTCAGTCATCTC 282 Query 293 TCGAAAAAGATACCAAATTTCTCAATCGGAGAAGCTAATGAAATCGTTACCATCACAAGC 352 ||||| ||||| | | ||||||||||||||||||||||| || ||||||||||| Sbjct 283 TCGAAGAAGAT-----A---C-CAATCGGAGAAGCTAATGAAATCTTTGCCATCACAAGC 333 Query 353 TGCGTTAGCAGCTCTGTTGTTCTCATCTTCATCTCCACAAGCTTTAGCAGTTAACGAACC 412 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 334 TGCGTTAGCGGCTCTGTTGTTCTCATCTTCGTCTCCACAAGCTTTAGCGGTTAACGAACC 393 Query 413 AGTTCAACCACCAGCACCAACCATTACTGCTGAAGCTCAATCACCAAATCTGTCGACTTT 472 ||||| || ||||| || |||||||||| ||||||||| ||||||||||||||||| || Sbjct 394 GGTTCAGCCGCCAGCTCCGACCATTACTGTTGAAGCTCAGTCACCAAATCTGTCGACGTT 453 Query 473 TGGTCAAAACGTTTTGATGACAGCACCGAATCCACAAGCTCAATCATCAGATCTTCCTGA 532 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 454 TGGTCAGAACGTTTTGATGACAGCACCGAATCCACAAGCTCAATCATCGGATCTTCCTGA 513 Query 533 TGGAACACAATGGCGATACAGTGAGTTTCTAAATGCTGTGAAGAAAGGTAAAGTTGAGAG 592 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 TGGAACACAGTGGCGATACAGTGAGTTTCTAAATGCTGTGAAGAAAGGTAAAGTTGAGAG 573 Query 593 AGTGAAGTTTAGTAAAGATGGTTCTGTTCTTCAGTTAACAGCTGTTGATAATCGTCGTGC 652 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 574 AGTGAAATTTAGTAAAGATGGTTCTGTTCTTCAGCTAACAGCTGTTGATAATCGTCGTGC 633 Query 653 TACTGTTATTGTTCCTAATGATCCTGATTTGATTGATATCTTGGCGATGAATGGTGTTGA 712 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 634 TACTGTTATTGTTCCTAATGATCCGGATTTGATTGATATCTTGGCGATGAATGGTGTCGA 693 Query 713 TATATCTGTTTCTGAAGGAGAAGGTGGAAATGGGTTGTTTGATTTCATTGGTAATTTGCT 772 |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 694 TATATCGGTTTCGGAAGGAGAATCTGGAAATGGGTTGTTTGATTTCATTGGTAATTTGCT 753 Query 773 TTTTCCTTTGTTGGCTTTTGGAGGGTTGTTTTATCTCTTTAGAGGAGGTCAAGGAGGTGC 832 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 754 TTTTCCTTTGTTGGCTTTTGGAGGGTTGTTTTATCTCTTTAGGGGAGGTCAGGGAGGTGC 813 Query 833 TGGTGGTCCTGGAGGTTTAGGAGGTCCTATGGATTTCGGAAGATCGAAATCGAAGTTTCA 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 814 TGGTGGTCCTGGAGGTTTAGGAGGTCCTATGGATTTCGGAAGATCGAAATCGAAGTTTCA 873 Query 893 GGAAGTGCCTGAAACCGGTGTGACATTTGGTGATGTTGCTGGAGCTGATCAAGCTAAGCT 952 ||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||| Sbjct 874 GGAAGTGCCGGAAACTGGGGTGACGTTTGGTGATGTTGCTGGAGCTGATCAAGCTAAGCT 933 Query 953 TGAGTTACAAGAAGTTGTTGATTTCTTGAAGAATCCTGATAAGTATACTGCGTTAGGTGC 1012 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 934 TGAGTTACAAGAAGTTGTTGATTTCTTGAAGAATCCTGATAAGTATACTGCTTTAGGTGC 993 Query 1013 TAAGATTCCTAAAGGTTGTTTGTTGGTTGGTCCACCGGGTACGGGGAAGACGCTTTTGGC 1072 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 TAAGATTCCTAAAGGGTGTTTGTTGGTTGGTCCACCGGGTACGGGGAAGACGCTTTTGGC 1053 Query 1073 TAGAGCTGTGGCTGGAGAAGCTGGAGTGCCGTTCTTTTCGTGTGCTGCTTCGGAGTTTGT 1132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1054 TAGAGCTGTGGCTGGAGAAGCAGGAGTGCCGTTCTTTTCGTGTGCTGCTTCGGAGTTTGT 1113 Query 1133 TGAGCTTTTTGTTGGTGTGGGTGCTTCTAGAGTTAGGGATTTATTTGAGAAGGCGAAATC 1192 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1114 GGAGCTTTTTGTTGGTGTGGGTGCTTCTAGAGTTAGGGATTTGTTTGAGAAGGCGAAATC 1173 Query 1193 GAAAGCTCCTTGTATTGTGTTTATTGATGAGATTGATGCTGTTGGTAGACAAAGAGGAGC 1252 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1174 GAAAGCTCCTTGTATTGTGTTTATTGATGAGATTGATGCTGTGGGTAGGCAAAGAGGAGC 1233 Query 1253 TGGGATGGGTGGTGGAAATGATGAGAGGGAACAGACTATTAATCAGCTTTTGACTGAGAT 1312 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1234 TGGGATGGGTGGTGGAAATGATGAGAGAGAACAGACGATTAATCAGCTTTTGACTGAGAT 1293 Query 1313 GGATGGGTTTTCTGGTAACTCTGGTGTCATTGTGTTGGCTGCCACTAATAGACCGGATGT 1372 |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct 1294 GGATGGGTTTTCTGGTAATTCTGGTGTCATTGTGTTGGCTGCAACCAATAGACCGGATGT 1353 Query 1373 TCTTGACTCCGCGTTGCTGAGACCTGGTAGATTTGACCGGCAAGTCACAGTGGATAGGCC 1432 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1354 TCTTGACTCCGCATTGCTGAGACCTGGTAGATTTGACCGGCAAGTCACAGTGGATAGGCC 1413 Query 1433 TGATGTAGCCGGAAGAGTTC-AGATCCTTAAGGTGCATTCTAGAGGAAAAGCTATTGGGA 1491 ||||||||| ||||||| || ||||||| |||||||||||||||| || |||||||||| Sbjct 1414 TGATGTAGCTGGAAGAG-TCAAGATCCTGCAGGTGCATTCTAGAGGGAAGGCTATTGGGA 1472 Query 1492 AGGATGTTGATTACGAAAAAGTTGCGAGGAGAACTCCGGGTTTCACTGGTGCTGATTTGC 1551 ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct 1473 AGGATGTGGATTATGAGAAAGTTGCGAGGAGAACTCCGGGTTTCACTGGTGCTGATTTAC 1532 Query 1552 AGAACCTGATGAATGAAGCTGCGATTCTTGCTGCTAGACGTGAGCTTAAGGAGATAAGCA 1611 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1533 AGAACCTGATGAATGAAGCTGCGATTCTTGCGGCTAGACGTGAGCTTAAGGAGATAAGCA 1592 Query 1612 AGGATGAAATATCTGATGCTCTTGAGAGGATCATTGCTGGACCTGAAAAGAAGAACGCTG 1671 ||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||| Sbjct 1593 AGGATGAAATATCCGATGCTCTTGAGAGGATCATTGCTGGACCGGAGAAGAAGAATGCTG 1652 Query 1672 TTGTCTCTGAGGAGAAGAAAAGACTTGTTGCTTACCATGAGGCTGGGCATGCTTTAGTTG 1731 ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1653 TTGTCTCAGAGGAGAAGAAGAGACTTGTTGCTTATCATGAGGCTGGGCATGCTTTAGTTG 1712 Query 1732 GTGCACTTATGCCGGAGTATGATCCAGTGGCCAAGATATCGATTATTCCACGTGGCCAAG 1791 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1713 GTGCACTTATGCCGGAGTACGATCCAGTGGCCAAGATATCGATTATTCCACGTGGTCAAG 1772 Query 1792 CTGGTGGGCTCACCTTTTTCGCTCCTAGCGAAGAGAGGCTAGAGTCCGGATTGTATAGCA 1851 |||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| Sbjct 1773 CTGGTGGGCTCACCTTTTTCGCCCCTAGCGAAGAGAGACTTGAGTCTGGATTGTATAGCA 1832 Query 1852 GAAGCTACCTTGAGAACCAAATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAAGAGGTGA 1911 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1833 GAAGCTACCTTGAGAATCAAATGGCTGTTGCACTTGGTGGAAGGGTTGCAGAAGAGGTGA 1892 Query 1912 TCTTTGGAGACGAGAATGTGACAACCGGAGCATCAAATGATTTCATGCAAGTGTCGCGGG 1971 ||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| || | Sbjct 1893 TCTTTGGTGACGAGAATGTAACAACCGGAGCATCAAACGATTTCATGCAGGTGTCACGAG 1952 Query 1972 TGGCTCGCCAAATGGTTGAGAGATTCGGGTTCAGCAAAAAGATTGGACAAGTTGCAGTTG 2031 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1953 TGGCTCGCCAAATGGTTGAGAGATTCGGGTTCAGCAAAAAGATTGGACAAGTTGCAGTTG 2012 Query 2032 GTGGAGCAGGAGGAAACCCTTTCTTGGGTCAAAGTATGTCATCGCAGAAGGATTACTCGA 2091 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 2013 GTGGAGCAGGAGGAAACCCTTTCTTGGGTCAAAGTATGTCATCACAGAAGGATTACTCAA 2072 Query 2092 TGGCAACAGCGGATGTGGTTGATGCGGAAGTGAGAGAGCTCGTTGAGAAGGCGTACGTGA 2151 ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct 2073 TGGCAACAGCGGATGTGGTTGATGCCGAAGTGAGAGAGCTGGTAGAGAAGGCGTACGTGA 2132 Query 2152 GAGCGAAAGAGATCATAACAACACAAATTGATATCCTACACAAGCTTGCACAGCTCCTTA 2211 | ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| | Sbjct 2133 GGGCGAAAGAGATCATAACAACACAAATTGATATCTTACACAAGCTTGCGCAGCTCCTAA 2192 Query 2212 TTGAGAAAGAAACTGTGGATGGAGAAGAGTTCATGAGTCTTTTCATTGACGGACAAGCCG 2271 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 2193 TTGAGAAAGAAACTGTGGATGGAGAAGAGTTCATGAGCCTTTTCATTGACGGACAAGCTG 2252 Query 2272 AGTTATATGTTTCTTAA 2288 |||| |||||||||||| Sbjct 2253 AGTTGTATGTTTCTTAA 2269 > Ahg923463 jgi|Araly1|923463|scaffold_104744.1 Length=2267 Score = 1718 bits (930), Expect = 0.0 Identities = 1516/1798 (84%), Gaps = 44/1798 (2%) Strand=Plus/Plus Query 514 AATCATCAGATCTTCCTGATGGAACACAATGGCGATACAGTGAGTTTCTAAATGCTGTGA 573 ||||||| ||||||||||| ||| |||| ||||||||||| |||||||| || || |||| Sbjct 412 AATCATCGGATCTTCCTGAAGGATCACAGTGGCGATACAGCGAGTTTCTTAACGCGGTGA 471 Query 574 AGAAAGGTAAAGTTGAGAGAGTGAAG-TTTAGTAAAGATGGTTCTGTTCTTCAG-TTAAC 631 |||||||||| || |||||||| || || || ||||| ||||||||| ||||| || || Sbjct 472 AGAAAGGTAAGGTGGAGAGAGT-TAGATTCAGCAAAGACGGTTCTGTTGTTCAGCTT-AC 529 Query 632 AGCTGTTGATAATCGTCGTG-CTACTGTTATTGTTCCTAATGATCCTGA-TTTGATTGAT 689 ||||| || ||||| |||| || | || || || ||||| || ||||| || |||||| Sbjct 530 TGCTGTCGACAATCGCCGTGCCT-CCGTCATCGTCCCTAACGACCCTGACCTT-ATTGAT 587 Query 690 ATCTTGGCGATGAATGGTGTTGATATATCTGTTTCTGAAGGAGAA---GGTGGAAATGGG 746 |||||||| ||||| || ||||||||||| ||||||||||||||| ||| |||| Sbjct 588 ATCTTGGCTATGAACGGAGTTGATATATCGGTTTCTGAAGGAGAATCCTCTGGCAATGAC 647 Query 747 TTGTTTGA-TTTCATTGGTAATTTGCTTTTTCC-TTTGTTGGCTTTTGGAGGGTTGTT-T 803 ||| || | | ||||||| || ||| |||| || || ||||| ||||| || | || | Sbjct 648 TTG-TTCACTGTCATTGGAAACTTGATTTTCCCGCTT-TTGGCCTTTGGTGGACTCTTCT 705 Query 804 TATCTCTTT-AGAG-GAGGTCAAGGAGGTGCTGGTGGT---CCTGGAGGTTTAGGAGGTC 858 | || ||| || | ||| ||| || ||| |||||||| |||||||| || || |||| Sbjct 706 T-GCT-TTTCAG-GCGAGCTCAGGGCGGTCCTGGTGGTGGCCCTGGAGGCTTGGGTGGTC 762 Query 859 CTATGGATTTCGGAAGATCGAAATCGAAGTTTCAGGAAGTGCCTGAAACCGGTGTGACAT 918 |||||||||||||| | || ||||| ||||| |||||||||||||| || |||||| ||| Sbjct 763 CTATGGATTTCGGACGTTCTAAATCCAAGTTCCAGGAAGTGCCTGAGACTGGTGTGTCAT 822 Query 919 TTGGTGATGTTGCTGGAGCTGATCAAGCTAAGCTT-GAGTTACAAGAAGTTGTTGATTTC 977 | | ||||||||||| ||||||||||||||| || |||||||| |||||||| |||||| Sbjct 823 TCGCAGATGTTGCTGGTGCTGATCAAGCTAAG-TTGGAGTTACAGGAAGTTGTGGATTTC 881 Query 978 TTGAAGAATCCTGATAAGTATACTGCGTTAGGTGCTAAGATTCCTAAAGGTTGTTTG-TT 1036 |||||||||||||||||||| || || || |||||||||||||||||||| |||||| || Sbjct 882 TTGAAGAATCCTGATAAGTACACAGCCTTGGGTGCTAAGATTCCTAAAGGGTGTTTGCTT 941 Query 1037 GGTTGGTCCACCGGGTACGGGGAAGACGCTTTTGGCTAGAGCTGTGGCTGGAGAAGCTGG 1096 ||||| || || |||||||| ||||| || ||||||| || |||||||| ||||| || Sbjct 942 -GTTGGACCGCCTGGTACGGGTAAGACACTCCTGGCTAGGGCGGTGGCTGGGGAAGCAGG 1000 Query 1097 AGTGCCGTTCTTTTCGTGTGCTGCTTCGGAGTTTGTTGAGCTTTTTGTTGGTGTGGGTGC 1156 ||| ||||||||||| || || || ||||||||||| ||||||||||| ||||||||||| Sbjct 1001 AGTACCGTTCTTTTCTTGCGCAGCCTCGGAGTTTGTGGAGCTTTTTGTGGGTGTGGGTGC 1060 Query 1157 TTCTAGAGTTAGGGATTTATTTGAGAAGGCGAAATCGAAAGCTCCTTGTATTGTGTTTAT 1216 ||||||||||||||||| || |||||||| || |||||||| ||||||||||| || || Sbjct 1061 ATCTAGAGTTAGGGATTTGTTCGAGAAGGCTAAGTCGAAAGCACCTTGTATTGTATTCAT 1120 Query 1217 TGATGAGATTGATGCTGTTGGTAGACAAAGAGGAGCTGGGATGGGTGGTGGAAATGATGA 1276 |||||||||||||||||| || || || ||||||||||||||||| || ||||||||||| Sbjct 1121 TGATGAGATTGATGCTGTGGGGAGGCAGAGAGGAGCTGGGATGGGAGGAGGAAATGATGA 1180 Query 1277 GAGGGAACAGACTATTAATCAGCTT-TTGACTGAGATGGATGGGTTTTCTGGTAACTCTG 1335 ||| |||||||||||||||||| || ||||| ||||||||||| |||||||| ||||||| Sbjct 1181 GAGAGAACAGACTATTAATCAG-TTGTTGACGGAGATGGATGGATTTTCTGGCAACTCTG 1239 Query 1336 GTGTCATTGTGTTGGCTGCCACTAATAGACCGGATGTTCTTGACTCCGCGTTGCTGAGAC 1395 |||| || || ||||| || |||||||| ||||| |||||||| || || || |||| | Sbjct 1240 GTGTGATAGTTTTGGCAGCTACTAATAGGCCGGACGTTCTTGATTCGGCACTGTTGAGGC 1299 Query 1396 CTGGTAGATTTGACCGGCAAGTCACAGTGGATAGGCCTGATGTAGCCGGAAGAGTTC-AG 1454 |||| || ||||| || || || || ||||||||||||||||| || || |||| || || Sbjct 1300 CTGGAAGGTTTGATCGACAGGTTACGGTGGATAGGCCTGATGTGGCTGGCAGAG-TCAAG 1358 Query 1455 ATCCTTAAGGTGCATTCTAGAGGAAAAGCTA-TTGGGAAGGATGTTGA-TTACGAAAAAG 1512 || || |||| |||||||| || || || | | || || ||||| || || || || | Sbjct 1359 ATTCTCCAGGTTCATTCTAGGGGGAAGGC-ACTCGGTAAAGATGTGGACTT-TGACAAGG 1416 Query 1513 TTGCGAGGAGAACTCCGGGTTTCACTGGTGCTGATTTGCAGAACCTGATGAATGAAGCTG 1572 |||||||||| || || |||||||| |||||||| || || ||||||||||||||||| | Sbjct 1417 TTGCGAGGAGGACCCCCGGTTTCACGGGTGCTGACTTACAAAACCTGATGAATGAAGCGG 1476 Query 1573 CGATTCTTGCTGCTAGACGTGAGCTTAAGGAGATAAGCAAGGATGAAATATCTGATGCTC 1632 |||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| Sbjct 1477 CGATTCTTGCAGCCAGGCGTGAGCTTAAGGAGATAAGCAAGGATGAAATCTCTGATGCTC 1536 Query 1633 TTGAGAGGATCATTGCTGGACCTGAAAAGAAGAACGCTGTTGTCTCTGAGGAGAAGAAAA 1692 ||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||| | Sbjct 1537 TTGAGAGGATCATTGCTGGACCTGAGAAGAAGAATGCAGTTGTCTCTGATGAGAAGAAGA 1596 Query 1693 GACTTGTTGCTTACCATGAGGCTGGGCATGCTTTAGTTGGTGCACTTATGCCGGAGTATG 1752 |||||||||| |||||||||||||| |||||| |||| ||||| ||||||||||| |||| Sbjct 1597 GACTTGTTGCATACCATGAGGCTGGCCATGCTCTAGTGGGTGCTCTTATGCCGGAATATG 1656 Query 1753 ATCCAGTGGCCAAGATATCGATTATTCCACGTGGCCAAGCTGGTGGGCTCACCTTTTTCG 1812 |||| || || ||||| || || ||||| ||||||||||||||||||||||| ||||| | Sbjct 1657 ATCCGGTTGCAAAGATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTCACTTTTTTTG 1716 Query 1813 CTCCTAGCGAAGAGAGGCTAGAGTCCGGATTGTATAGCAGAAGCTACCTTGAGAACCAAA 1872 |||| |||||||| || || ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct 1717 CTCCAAGCGAAGAAAGACTTGAGTCTGGATTGTACAGCAGGAGCTACCTCGAGAATCAAA 1776 Query 1873 TGGCTGTTGCACTTGGTGGAAGGGTTGCAGAAGAGGTGATCTTTGGAGACGAGAATGTGA 1932 |||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||| Sbjct 1777 TGGCTGTTGCACTTGGCGGAAGGGTTGCAGAGGAGGTGATCTTTGGGGATGAGAATGTGA 1836 Query 1933 CAACCGGAGCATCAAATGATTTCATGCAAGTGTCGCGGGTGGCTCGCCAAATGGTTGAGA 1992 | |||||||||||||||||||||||||| ||||| || ||||| || |||||| |||||| Sbjct 1837 CGACCGGAGCATCAAATGATTTCATGCAGGTGTCTCGTGTGGCACGTCAAATGATTGAGA 1896 Query 1993 GATTCGGGTTCAGCAAAAAGATTGGACAAGTTGCAGTTGGTGGAGCAGGAGGAAA-CCCT 2051 |||| || |||||||||||||||||||||||||| |||||||| | || ||||| |||| Sbjct 1897 GATTTGGCTTCAGCAAAAAGATTGGACAAGTTGCTGTTGGTGGCCCTGGTGGAAATCCCT 1956 Query 2052 TTCTTGGGTCAA-AGTATGTCATCGCAGAAGGATTACTCGATGGCAACAGCGGATGTGGT 2110 || | ||||||| | |||||||| ||||| |||||||| |||||||| || ||| | || Sbjct 1957 TTAT-GGGTCAACAA-ATGTCATCACAGAAAGATTACTCAATGGCAACTGCAGATATTGT 2014 Query 2111 TGATGCGGAAGTGAGAGAGCTCGTTGAGAAGGCGTACGTGAGAGCGAAAG-AGATCATAA 2169 ||||| || ||| ||||| | ||||||||||| ||| |||||| || | ||||||||| Sbjct 2015 AGATGCTGAGGTGCGAGAGTTAGTTGAGAAGGCATACAAGAGAGC-AACGGAGATCATAA 2073 Query 2170 CAACACAAATTGATATCCTACACAAGCTTGCACAGCTCCTTATTGAGAAAGAAACTGTGG 2229 |||| || |||||||||||||||||||||||||||||||| || |||||||||||||| | Sbjct 2074 CAACTCATATTGATATCCTACACAAGCTTGCACAGCTCCTCATCGAGAAAGAAACTGTTG 2133 Query 2230 ATGGAGAAGAGTTCATGAGTCT-TTTCATTGACGGACAAGCCGAGTTATATGTTTCTT 2286 | || |||||||||||||| || ||| |||||||| ||||| ||||| ||| | |||| Sbjct 2134 ACGGCGAAGAGTTCATGAGCCTCTTT-ATTGACGGCCAAGCTGAGTTGTATATATCTT 2190 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93473461230 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5