BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G43760.1 Length=1841 Score E Sequences producing significant alignments: (Bits) Value Ahg470398 jgi|Araly1|470398|fgenesh2_kg.1__352__AT1G04220.1 1443 0.0 Ahg356713 jgi|Araly1|356713|fgenesh1_pg.C_scaffold_8000500 1360 0.0 Ahg333105 jgi|Araly1|333105|fgenesh1_pm.C_scaffold_37000001 1330 0.0 Ahg918858 jgi|Araly1|918858|scaffold_100139.1 311 1e-83 > Ahg470398 jgi|Araly1|470398|fgenesh2_kg.1__352__AT1G04220.1 Length=1619 Score = 1443 bits (781), Expect = 0.0 Identities = 1291/1534 (84%), Gaps = 48/1534 (3%) Strand=Plus/Plus Query 214 CAAACAACCTCCCAAACTTTCTATTATCCGTCCGTCTCAAATACGTAAAACTCGGTTACC 273 |||| || ||||||||||| || ||||| || || || |||||||| ||||||||||||| Sbjct 99 CAAA-AAACTCCCAAACTTCCTCTTATCGGTACGCCTTAAATACGTTAAACTCGGTTACC 157 Query 274 ACTACCTAATCTCCAACGCTC-TCTACATCCTCCTCCTTCC--T-CTCCTCGCCGCAACA 329 | ||||||||||| || || | ||||||||||| |||| || | |||||||||||||| Sbjct 158 ATTACCTAATCTCTAATGC-CGTCTACATCCTCATCCTCCCTGTCCTCCTCGCCGCAAC- 215 Query 330 ATCGCTAACCTCTCTTCTTTCACCATCAACGACCTCTCTCTCCTCTACAA-CA-C-ACTC 386 || || |||| |||| || | || ||| ||| | ||| | ||||| || | ||| Sbjct 216 CTC-CT--CCTC-CTTCAATC-TC-TC--CGATCTCACACTCTTATACAACCACCTTCTC 267 Query 387 CGTTTCCATTTCCTCTCCGCCAC---ACTCGCCACCGCAC-TCTTAATCTCTCTCTCCAC 442 ||||| |||||||| |||| | ||| || || | |||| |||| ||| |||| Sbjct 268 AAATTCCACTTCCTCTCTTCCACTATATTCG-CA--GCCCTTCTT-ATCTTTCTAACCAC 323 Query 443 CGCT-TACTTCACCACCCGTCCCCGCCGTG-TCTTCCTCCTCGACTTCTCGTGTTACAAA 500 | || |||||||| || ||||| || | | | ||||||||||| ||| | ||||||||| Sbjct 324 C-CTCTACTTCACAACTCGTCCTCG-CAAGATATTCCTCCTCGATTTCGCTTGTTACAAA 381 Query 501 CCAGACCCTTCACTGATCTGCACTCGTGAAACATTCATGGACAGATCTCAACGTGTAGGC 560 || ||| |||| || || ||||| || ||||| ||||||||| | ||||||||||| || Sbjct 382 CCCGACTCTTCTCTAATATGCACACGAGAAACGTTCATGGACCGGTCTCAACGTGTTGGT 441 Query 561 ATCTTCACAGAAGACAACTTAGCTTTCCAACAAAAGATCCTCGAAAGATCCGGTCTAGGT 620 |||||||||||||||||| | |||||||||||||||||||||||| | |||||||| || Sbjct 442 ATCTTCACAGAAGACAACCTCGCTTTCCAACAAAAGATCCTCGAACGCTCCGGTCTTGGA 501 Query 621 CAGAAAACTTACTTCCCTGAAGCTCTTCTT-CGTGTTCCTCCTAATCCTTGTATGGAAGA 679 || |||||||||||||| || |||| |||| ||||| || || |||||||||||| || Sbjct 502 CAAAAAACTTACTTCCCGGAGGCTC-TCTTACGTGTCCCGCCGAATCCTTGTATGTCTGA 560 Query 680 AGCGAGAAAAGAGGCAGAAACAGTTATGTTCGGAGCTATTGACGCGGTTCTTGAGAAGAC 739 ||| || ||||| || || || |||||||| |||||||| ||||| || |||||||| || Sbjct 561 AGCAAGGAAAGAAGCCGAGACGGTTATGTTTGGAGCTATAGACGCAGTGCTTGAGAAAAC 620 Query 740 CGGTGTGAAACCTAAAGATATTGGAATCCTTGTGGTGAATTGTAGCTTGTTTAATCCAAC 799 || ||||| ||||| |||||||| || ||||||||||||||||||||||||||||| || Sbjct 621 AGGAGTGAAGCCTAAGGATATTGGGATACTTGTGGTGAATTGTAGCTTGTTTAATCCGAC 680 Query 800 ACCGTCACTT-TCTGCTATGATTGTGAATAAGTATAAGCTTAGAGGCAACATTTTGAGCT 858 || || ||| || |||||||| |||||||| |||||||||||||| ||||||||||||| Sbjct 681 GCCTTC-CTTATCAGCTATGATCGTGAATAAATATAAGCTTAGAGGAAACATTTTGAGCT 739 Query 859 ATAATCTTGGTGGAATGGGATGTAGTGCTGGCCTTATCTCCATTGATCTCGCTAAACAGA 918 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 740 ATAATCTTGGTGGGATGGGTTGTAGTGCTGGTCTTATCTCCATTGATCTCGCTAAACAGC 799 Query 919 TGCTTCAGGTGCAACCAAACTCATACGCACTAGTGGTGAGCACAGAGAACATAACCCTAA 978 | |||||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||||| Sbjct 800 TTCTTCAGGTCCAACCAAATTCATATGCACTAGTAGTGAGCACAGAAAACATAACCCTAA 859 Query 979 ACTGGTACTTAGGCAACGACCGATCAATGCTTCTATCTAACTGTATCTTCCGTATGGGCG 1038 ||||||| |||||||||||||||||||||||||| || |||||||||||| | ||||| | Sbjct 860 ACTGGTATTTAGGCAACGACCGATCAATGCTTCTCTCAAACTGTATCTTCAGAATGGGTG 919 Query 1039 GAGCCGCGGTACTTCTCTCGAACCGCTCCTCTGATCGCAGCCGTTCAAAATATCAGCTCA 1098 | || || || || ||||| ||||||| ||| || ||| |||| || ||||| || |||| Sbjct 920 GCGCAGCCGTTCTCCTCTCTAACCGCTGCTCCGACCGCCGCCGCTCCAAATACCAACTCA 979 Query 1099 TCCATACCGTCCGTACCCACAAAGGAGCTGATGACAACGCATTTGGCTGTGTTTACCAAC 1158 |||| |||||||||||||||||||||||||| |||||||| ||| ||| |||||||||| Sbjct 980 TCCACACCGTCCGTACCCACAAAGGAGCTGACGACAACGCCTTTAACTGCGTTTACCAAC 1039 Query 1159 GAGAAGACAACAACGCAGAAGAAACCGGCAAAATCGGAGTGTCCCTCTCTAAAAACCTAA 1218 | ||||||| | ||| | || ||| | ||||||| || || || || |||||||||| Sbjct 1040 GCGAAGACAGCGACG-ACAACAAA----C-AAATCGGTGTCTCACTTTCCAAAAACCTAA 1093 Query 1219 TGGCGATAGCTGGAGAAGCTCTCAAGACAAACATCACAACTCTCGGACCACTAGTTCTAC 1278 |||| ||||| ||||||||||||||||| ||||| || ||||||||||| ||||| || | Sbjct 1094 TGGCTATAGCCGGAGAAGCTCTCAAGACGAACATAACCACTCTCGGACCGCTAGTCCTTC 1153 Query 1279 CAATGTCCGAACAACTTCTCTTTTTCGCGACTCTTGTGGCCCGAAAAGTCTTCAAAGTCA 1338 ||||||||||||||||||| |||||||| || || ||||| ||||||||||| || || | Sbjct 1154 CAATGTCCGAACAACTTCTATTTTTCGCAACACTCGTGGCGCGAAAAGTCTTTAATGTGA 1213 Query 1339 AGAAAAT-AAAGCCTTACATTCCTGATTTCAAGCTAGCTTTCGAGCATTTCTGTATCCAC 1397 ||||||| ||| ||||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct 1214 AGAAAATCAAA-CCTTATATTCCTGATTTCAAGCTAGCATTCGAGCACTTCTGCATCCAC 1272 Query 1398 GCGGGAGGTAGAGCCGTGCTCGACGAGATTGAGAAGAACTTGGAT-TTATCCGAATGGCA 1456 |||||||| ||||| |||||||| |||||||||||||| |||||| || || || ||||| Sbjct 1273 GCGGGAGGCAGAGCAGTGCTCGATGAGATTGAGAAGAATTTGGATCTT-TCTGAGTGGCA 1331 Query 1457 CATGGAGCCATCGAGGATGACGTTGAACCGGTTTGGTAACACTTCGAGTAGCTCACTTTG 1516 |||||||| || ||||||| |||||||||||||| || |||||||||||||| || || Sbjct 1332 TATGGAGCCTTCTCGGATGACTTTGAACCGGTTTGGGAATACTTCGAGTAGCTCGCTGTG 1391 Query 1517 GTATGAGCTTGCGTATAGTGAAGCTAAAGGAAGGATTAAGAGAGGAGATAGGACTTGGCA 1576 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1392 GTATGAGCTTGCGTATAGTGAGGCTAAAGGAAGGATTAAGAGAGGAGATAGGACTTGGCA 1451 Query 1577 GATTGCTTTTGGATCGGGTTTTAAGTGTAATAGTGCAGTTTGGAAAGCTTTGAGAACGAT 1636 |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| || Sbjct 1452 GATTGCTTTTGGGTCGGGTTTTAAGTGTAATAGTGCGGTTTGGAGAGCTTTGAGAACTAT 1511 Query 1637 TGATCCAATGGACG-AGAAGACTAATCCATGGATTGATGAGATTGATGACTTTCCTGTTC 1695 |||||| | | | ||||||||||||||||||||||||||||| |||| ||||| || | Sbjct 1512 TGATCCG-TCCAAGGAGAAGACTAATCCATGGATTGATGAGATTCATGAGTTTCCGGTGC 1570 Query 1696 AAGTTCCTAGGATCA-CTCCCATTACATCGTCGT 1728 ||||| ||||| | |||| | ||||| |||| Sbjct 1571 CCGTTCCCAGGAT-ATCTCCGGTGACATCTTCGT 1603 > Ahg356713 jgi|Araly1|356713|fgenesh1_pg.C_scaffold_8000500 Length=813 Score = 1360 bits (736), Expect = 0.0 Identities = 782/805 (97%), Gaps = 0/805 (0%) Strand=Plus/Plus Query 926 GGTGCAACCAAACTCATACGCACTAGTGGTGAGCACAGAGAACATAACCCTAAACTGGTA 985 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 9 GGTGCAACCAAACTCCTACGCACTAGTGGTGAGCACAGAGAACATAACCCTAAACTGGTA 68 Query 986 CTTAGGCAACGACCGATCAATGCTTCTATCTAACTGTATCTTCCGTATGGGCGGAGCCGC 1045 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 69 CTTAGGCAACGACCGATCAATGCTTCTCTCTAACTGCATCTTCCGTATGGGCGGAGCCGC 128 Query 1046 GGTACTTCTCTCGAACCGCTCCTCTGATCGCAGCCGTTCAAAATATCAGCTCATCCATAC 1105 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct 129 GGTACTTCTCTCGAACCGCTCCTCGGATCGTAGCCGTTCAAAATATCAGCTCATCCACAC 188 Query 1106 CGTCCGTACCCACAAAGGAGCTGATGACAACGCATTTGGCTGTGTTTACCAACGAGAAGA 1165 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 189 CGTTCGTACCCACAAAGGAGCTGATGACAACGCATTCGGCTGTGTTTACCAACGAGAAGA 248 Query 1166 CAACAACGCAGAAGAAACCGGCAAAATCGGAGTGTCCCTCTCTAAAAACCTAATGGCGAT 1225 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct 249 CAACAACGCAGAAGAAACCGGCAAAATCGGAGTATCACTCTCTAAAAACCTAATGGCAAT 308 Query 1226 AGCTGGAGAAGCTCTCAAGACAAACATCACAACTCTCGGACCACTAGTTCTACCAATGTC 1285 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 309 AGCTGGAGAAGCTCTCAAGACAAACATCACAACTCTCGGACCACTAGTCCTACCAATGTC 368 Query 1286 CGAACAACTTCTCTTTTTCGCGACTCTTGTGGCCCGAAAAGTCTTCAAAGTCAAGAAAAT 1345 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 369 CGAACAACTTCTCTTTTTCGCGACCCTCGTGGCCCGAAAAGTCTTCAAAGTCAAGAAAAT 428 Query 1346 AAAGCCTTACATTCCTGATTTCAAGCTAGCTTTCGAGCATTTCTGTATCCACGCGGGAGG 1405 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 429 AAAGCCTTACATTCCCGATTTCAAGCTAGCTTTCGAGCATTTCTGTATCCACGCGGGAGG 488 Query 1406 TAGAGCCGTGCTCGACGAGATTGAGAAGAACTTGGATTTATCCGAATGGCACATGGAGCC 1465 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 489 TAGAGCCGTGCTCGACGAGATAGAGAAGAACTTGGATTTATCCGAATGGCATATGGAGCC 548 Query 1466 ATCGAGGATGACGTTGAACCGGTTTGGTAACACTTCGAGTAGCTCACTTTGGTATGAGCT 1525 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 549 ATCGAGGATGACGTTGAACCGGTTTGGAAACACTTCGAGTAGCTCACTTTGGTATGAGCT 608 Query 1526 TGCGTATAGTGAAGCTAAAGGAAGGATTAAGAGAGGAGATAGGACTTGGCAGATTGCTTT 1585 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 609 TGCGTATAGTGAAGCTAAAGGAAGGATTAAGAGAGGAGATAGGACTTGGCAGATTGCGTT 668 Query 1586 TGGATCGGGTTTTAAGTGTAATAGTGCAGTTTGGAAAGCTTTGAGAACGATTGATCCAAT 1645 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 669 CGGATCGGGTTTTAAGTGTAACAGTGCGGTTTGGAAAGCTTTGAGAACGATTGATCCAAT 728 Query 1646 GGACGAGAAGACTAATCCATGGATTGATGAGATTGATGACTTTCCTGTTCAAGTTCCTAG 1705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 729 GGACGAGAAGACTAATCCATGGATTGATGAGATTGATGACTTTCCTGTTCAAGTTCCTAG 788 Query 1706 GATCACTCCCATTACATCGTCGTAG 1730 ||||||||||||||| ||||||||| Sbjct 789 GATCACTCCCATTACGTCGTCGTAG 813 > Ahg333105 jgi|Araly1|333105|fgenesh1_pm.C_scaffold_37000001 Length=846 Score = 1330 bits (720), Expect = 0.0 Identities = 764/786 (97%), Gaps = 0/786 (0%) Strand=Plus/Plus Query 141 ATGAGCCATAACCAAAACCAACCTCACCGGCCAGTCCCGGTCCATGTCACAAACGCCGAG 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAGCCATAACCAAAACCAACCTCACCGGCCAGTCCCGGTCCATGTCACAAACGCCGAG 60 Query 201 CCAAACCCTAACCCAAACAACCTCCCAAACTTTCTATTATCCGTCCGTCTCAAATACGTA 260 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 61 CCAAACCCTAACCCAAACAACCTCCCAAACTTTCTCTTATCCGTTCGTCTCAAATACGTA 120 Query 261 AAACTCGGTTACCACTACCTAATCTCCAACGCTCTCTACATCCTCCTCCTTCCTCTCCTC 320 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 121 AAACTCGGTTACCATTACCTAATCTCCAACGCTCTCTACATCCTCCTCCTCCCTCTCCTC 180 Query 321 GCCGCAACAATCGCTAACCTCTCTTCTTTCACCATCAACGACCTCTCTCTCCTCTACAAC 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCCGCAACAATCGCTAACCTCTCTTCTTTCACCATCAACGACCTCTCTCTCCTCTACAAC 240 Query 381 ACACTCCGTTTCCATTTCCTCTCCGCCACACTCGCCACCGCACTCTTAATCTCTCTCTCC 440 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 241 ACACTCCGTTTCCATTTCCTCTCCGCCACACTAGCCACCGGACTCTTAATCTCTCTCTCC 300 Query 441 ACCGCTTACTTCACCACCCGTCCCCGCCGTGTCTTCCTCCTCGACTTCTCGTGTTACAAA 500 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct 301 ACCGCCTACTTCACCACACGTCCTCGCCGTGTCTTCCTCCTCGACTTCTCATGTTACAAA 360 Query 501 CCAGACCCTTCACTGATCTGCACTCGTGAAACATTCATGGACAGATCTCAACGTGTAGGC 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CCAGACCCTTCACTGATCTGCACTCGTGAAACATTCATGGACAGATCTCAACGTGTAGGT 420 Query 561 ATCTTCACAGAAGACAACTTAGCTTTCCAACAAAAGATCCTCGAAAGATCCGGTCTAGGT 620 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 421 ATCTTCACAGAAGACAACCTAGCTTTCCAACAAAAGATCCTTGAAAGATCCGGTCTAGGT 480 Query 621 CAGAAAACTTACTTCCCTGAAGCTCTTCTTCGTGTTCCTCCTAATCCTTGTATGGAAGAA 680 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 481 CAAAAAACTTACTTCCCTGAAGCTCTTCTTCGTGTCCCTCCTAATCCTTGTATGGAAGAA 540 Query 681 GCGAGAAAAGAGGCAGAAACAGTTATGTTCGGAGCTATTGACGCGGTTCTTGAGAAGACC 740 || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GCAAGAAAGGAGGCAGAGACAGTTATGTTCGGAGCTATTGACGCGGTTCTTGAGAAGACC 600 Query 741 GGTGTGAAACCTAAAGATATTGGAATCCTTGTGGTGAATTGTAGCTTGTTTAATCCAACA 800 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 601 GGTGTTAAACCTAAAGATATTGGAATCCTTGTGGTGAATTGTAGTTTGTTTAATCCAACG 660 Query 801 CCGTCACTTTCTGCTATGATTGTGAATAAGTATAAGCTTAGAGGCAACATTTTGAGCTAT 860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 CCGTCACTTTCTGCTATGATTGTGAATAAGTATAAGCTTAGAGGCAACATTTTGAGCTAT 720 Query 861 AATCTTGGTGGAATGGGATGTAGTGCTGGCCTTATCTCCATTGATCTCGCTAAACAGATG 920 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 721 AATCTTGGTGGAATGGGATGTAGTGCTGGACTTATCTCCATTGATCTCGCTAAACAGATG 780 Query 921 CTTCAG 926 |||||| Sbjct 781 CTTCAG 786 > Ahg918858 jgi|Araly1|918858|scaffold_100139.1 Length=1628 Score = 311 bits (168), Expect = 1e-83 Identities = 710/959 (74%), Gaps = 87/959 (9%) Strand=Plus/Plus Query 702 GTTATGTTCGGAG-CTATTGACGCGGTTCTT-GAGAAGACCGGTGTGAAACCTAAAGATA 759 ||||||||||||| || | || | |||| ||||| ||||| | ||||| || | Sbjct 616 GTTATGTTCGGAGCCT-TAGATTC-CCTCTTCGAGAAAACCGGAATTAAACCGGCCGA-A 672 Query 760 -TTGGAATCCTTG-TGGTGAATTGTAGCTTGTTTAATCCAACACCGTCACTTTCTGCTAT 817 ||||||| |||| | || || || ||||| || ||||| || ||||| || || || || Sbjct 673 GTTGGAAT-CTTGATAGTAAACTGCAGCTTATTCAATCCGACGCCGTCTCTATCAGCGAT 731 Query 818 GATTGTGAATAAGTATAAGCTTAGAGGCA-ACATTTTGAGCTATAATCTTGGTGGAATGG 876 ||| ||||| | || ||| | ||| | | |||| ||||| || || || ||||||| Sbjct 732 GATCGTGAACCATTACAAGATGAGA-GAAGACATCAAAAGCTACAACCTCGGAGGAATGG 790 Query 877 GATG-TAGTGCTGGCCTT-ATCTCCATTGATCTCGCTAAAC-AGATGCTTCAGGTGC-AA 932 | || | ||| || || ||||| || |||||||| |||| | | | ||| || || Sbjct 791 GTTGCT-CTGCCGG-ATTAATCTCAATCGATCTCGC-AAACAACCT-CCTCA-AAGCAAA 845 Query 933 -CCAAACTCATACGCACTAGTGGTGAGCACAGAGAACATAACCCTAAACTGGTACTTAGG 991 || || || ||||| | ||||| ||||| || ||||||||||||||||||||||| || Sbjct 846 CCCTAATTCTTACGCTGTCGTGGTAAGCACGGAAAACATAACCCTAAACTGGTACTTCGG 905 Query 992 CAACGACCGATCAATGCTTCTAT-CTAACTGTATCTTCCGTATGGGCGGAGCCGCGGTAC 1050 || |||||||||||||| || | | ||||| |||||||| ||||||||||| ||| | | Sbjct 906 AAATGACCGATCAATGCTCCTCTGC-AACTGCATCTTCCGAATGGGCGGAGCTGCGATTC 964 Query 1051 TTCTCTCGAACCGCTCCTC-TGATC-GCAGCCGTTCAAAATA-TCAGCTCATCCATAC-- 1105 | || || |||||| | | || | | || | ||||| || || ||| | || || Sbjct 965 TCCTTTCTAACCGC-CGACAAGACCGGAAGAAG-TCAAAGTACTC-GCTGGT-CA-ACGT 1019 Query 1106 CGTCCGTACCCACAAAGGAGCTGATGAC---AAC-GCATTTGGCTGTGTTTACCAACGAG 1161 ||| || || || |||||| | || ||| ||| || || || ||| || | | || Sbjct 1020 CGTTCGAACGCATAAAGGATCAGACGACAAGAACTACAATT-GC-GTG--TA-C--C-AG 1071 Query 1162 AAGACAACAACGCAGAAGAAACCGGCAA-AATCGGAGTGTCCCTCT--CTAAAAACCTAA 1218 ||| || ||| || || | || || |||| | ||||| || | || | | || | Sbjct 1072 AAG-GAA-GACG-AG-AG--A--GG-AACAATC-G-GTGTCTCTTTAGCTCGAGAGCTCA 1120 Query 1219 TGGC-GATAGCTGGAGAAGCTCTCAAGACAAACATCACAACTCTCGGACC-ACTAGTTCT 1276 || | | | || ||||| ||||| || ||||||||||| ||| | ||||| | | ||||| Sbjct 1121 TGTCTG-TTGCCGGAGACGCTCTGAAAACAAACATCACGACTTTAGGACCGA-TGGTTCT 1178 Query 1277 ACCAATGTCCGAACAACTTCTCTTTTTCGCGA-CTCTTGTGGCCCGAA--AAG-TCTTCA 1332 ||| |||| |||| | | | | ||| || || | ||| | || ||| | ||| Sbjct 1179 CCCATTGTCGGAAC-A-GT-TGATGTTCTTGATTTCAT-TGGTCAAAAGGAAGATGTTC- 1233 Query 1333 AAGTCAAGAAAAT-AAAGCCTTACATTCCTGATTTCAAGCTAGCTTTCGAGCATTTCTGT 1391 ||| | | ||| | ||| || || ||||| |||||||||||||||||||||||||||||| Sbjct 1234 AAG-CTA-AAAGTGAAA-CCGTATATTCCGGATTTCAAGCTAGCTTTCGAGCATTTCTGT 1290 Query 1392 ATCCACGCGGGAGGTAGAGCCGTGCTCGACGAGATTG-AGAAGAA-CTTGGATTT-ATCC 1448 || ||||| ||||||||||| || || ||||| | || ||||||| |||| || | | Sbjct 1291 ATTCACGCAGGAGGTAGAGCGGTTCTAGACGA-AGTGCAGAAGAATCTTG-ATCTCAAA- 1347 Query 1449 GAATGGCACATGGAGCCATCGAGGATGACGTTGAACCGGTTTGGTAACACTTCGAGTAGC 1508 || ||||||||||| || || || ||||| ||| |||||||||||||||||||||||||| Sbjct 1348 GATTGGCACATGGAACCTTCTAGAATGACTTTGCACCGGTTTGGTAACACTTCGAGTAGC 1407 Query 1509 TCACTTTGGTATGAGCTTGCGTATA-GTGAAGCTAAAGGAAGGATTAAGAGA-GGAGATA 1566 || |||||||||||| | || |||| | |||||||| || || |||| || || ||| Sbjct 1408 TCGCTTTGGTATGAGATGGCTTATACG-GAAGCTAAGGGTCGGGTTAA-AGCCGGTGATC 1465 Query 1567 GGACTT-GGCAGATTGCTTTTGGATCGGGTTTTAAGTGTAATAGTGCAGTTTGGAAAGC 1624 | |||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct 1466 G-ACTTTGGCAGATTGCGTTTGGATCGGGTTTCAAGTGTAATAGTGCGGTTTGGAAAGC 1523 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69133794675 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5