BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G44530.1 Length=2864 Score E Sequences producing significant alignments: (Bits) Value Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1 4372 0.0 Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883 1738 0.0 Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109 795 0.0 > Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1 Length=2867 Score = 4372 bits (2367), Expect = 0.0 Identities = 2717/2883 (94%), Gaps = 35/2883 (1%) Strand=Plus/Plus Query 1 ACTCTTCTTTCACCGACCTCCTTACACCAAAAAGGTGTCAATTCCACTTGTTCACCATGA 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 ACTCTTCTTTCACCGACCTCC-GACACCAAAAAGGTGTCAATTCCACTTGTTCACCATG- 58 Query 61 ATATGATTTAATGGGTTCTTCTTCTTTTGCAGCTTTCTTTCTTTTCCTTAAATTATCATT 120 | ||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| || Sbjct 59 AGATGCTTTAATGGCTTCTTCTTCTTTTGCAGCTTTCTTTATTTTCCTTAAATTATCTTT 118 Query 121 GTTTTAGGT-GGGGTTTTAAGTGCTTTCATGACTCATTCATTCTCTGTATAAAACCTAGT 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 GTTTTAGGTGGGGGTTTTAAGTGCTTTCATGACTCATTCATTCTCTGTATAAAACCTAGT 178 Query 180 GGAAAGTGTTAAATCAAAAACCCTTTTTTCCCACTTTCTTAATTTAGAAGGGAGACGaaa 239 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 179 GGAAAGTGTTAAATC-AAAACCCTTTTTTCCCACTTTCTTAATTTAGAAGGGAGAC-AAA 236 Query 240 -aaaaTGGTTAGAGTAATGTTGGTGAGGTTTGGGTTTTTATTACTTA-TGATCTC-TTTT 296 ||||||| ||||| |||||||||| ||||||||||||||||| || ||||||| |||| Sbjct 237 CAAAATGGGAAGAGTTATGTTGGTGAAGTTTGGGTTTTTATTAC-TAGTGATCTCTTTTT 295 Query 297 GTGTTTTTGTCTAATAACACTTTGGGACAACAACAAGACGATGATGATGATTCTGCTGTG 356 | ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||| Sbjct 296 G-GTTTTTGTCTAATAACATTTTGGGACAACAACAAGATGAGGATGATGATTCTGCTGTG 354 Query 357 TACATTGTCACACTTAAACAACCTCCTATTGTCCATCTCTTTGAAGAACAAGAGCTTAAA 416 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 355 TACATTGTCACACTTAAAGAACCTCCTATTGTTCATCTCTTTGAAGAACAAGAGCTTAAA 414 Query 417 CACAAAAAGTC-AAAGTTTACACCAAAATTGCGACCAAGGAACAATTCAAGGAAACGTCA 475 || |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 415 CAAAAAAAGTCTAAA-TTTACACCAAAATTGAAACCAAGGAACAATTCAAGGAAACGTCA 473 Query 476 TGGGAAGTCAAAGATACCATCTGTTGTTCAATCTCATGACTCTTTCTTGAGAAAGAC-TC 534 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 474 TGGGAAGTCAAAGATACCATCTGTTGCTCAATCTCATGACTCTTTCTTGAGAAAGACAT- 532 Query 535 TAAAAGGAGAGAAGTATATAAAGCTTTATAGTTACCATTATCTTATCAATGGATTTGCTC 594 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 533 TAAAAGGAGAGAAGTATATAAAGCTTTATAGTTACCATTATCTAATCAATGGATTTGCTC 592 Query 595 TGTTTATTAACTCACAACAGGCTGAGAAGCTTTCAATGAGAAAAGAAGTAGCAAACATAG 654 ||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 593 TGTTTGTTAGCTCACAACAGGCTGAGAAGCTGTCAATGAGAAGAGAAGTAGCAAACATAG 652 Query 655 TGTTGGATTACTCTGTTAGGACAGCAACAACTTATACTCCACAGTTTATGGGTTTACCAC 714 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 653 TGTTGGATTACTCTGTTAGGACAGCAACAACTTATACCCCACAGTTTATGGGTTTACCAC 712 Query 715 AAGGAGCATGGGTCAAAGAAGGTGGATTTGAGATTGCTGGAGAAGGAGTTATAATCGGTT 774 ||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||| | Sbjct 713 AAGGAGCATGGGTCAAAGAAGGTGGATATGAGATTGCTGGAGAAGGAATTGTTATCGGGT 772 Query 775 TTATCGATACTGGGATCGATCCGAATCATCCTAGTTTCAATGACAATGACTCTAAGCGTT 834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 TTATCGATACTGGGATCGATCCGAATCATCCTAGTTTCAATGACAATGACTCTAAGCGTT 832 Query 835 CATATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCAG 894 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 833 CATATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCTTCAG 892 Query 895 GATCTTGCAATAAGAAGCTTATTGGAG-CACGGCATTTCGCGCAATCCGCTGTAACCAGA 953 ||||||||||||||||||| ||||||| || | ||||||||||||||||||||||||||| Sbjct 893 GATCTTGCAATAAGAAGCTAATTGGAGCCA-GACATTTCGCGCAATCCGCTGTAACCAGA 951 Query 954 GGAATCTTTAACTCATCTGAAGATTACGCTTCTCCTTTCGATGGAGATGGACATGGAACA 1013 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 952 GGAATTTTTAACTCATCTGAAGAATACGCTTCTCCTTTCGATGGAGATGGACATGGAACA 1011 Query 1014 CACACAGCTTCGGTTGCAGCGGGTAACCACGGAGTTCCAGTGATAGTTTCTAACCATAAC 1073 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 CACACAGCTTCAGTTGCAGCGGGTAACCACGGAGTTCCAGTGATAGTTTCTAACCATAAC 1071 Query 1074 TTTGGATACGCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGTAT 1133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1072 TTTGGATACGCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGTAT 1131 Query 1134 AAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTAGCAGCTATAGATCAGGCAGCTCAAGAT 1193 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1132 AAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTTGCAGCTATAGATCAGGCAGCTCAAGAT 1191 Query 1194 GGAGTAGATATATTAAGCCTATCAATTACACCGAATCGGAAACCTCCCGGTGTTGCCACT 1253 ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct 1192 GGAGTAGATATATTAAGTCTATCAATTACACCGAATCGAAAACCTCCTGGTGTTGCCACT 1251 Query 1254 TTCTTTAATCCTATCGACATGGCATTACTTTCCGCTGTAAAAGCCGGAATCTTCGTAGTC 1313 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct 1252 TTCTTTAATCCTATCGATATGGCATTACTTTCCGCTGTAAAAGCCGGAATTTTTGTAGTC 1311 Query 1314 CAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAACCATGTCTTCTTTTAGTCCTTGGATA 1373 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1312 CAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAAGCATGTCTTCTTTTAGTCCTTGGATT 1371 Query 1374 TTCACCGTTGGTGCTTCTTCTCATGATAGAGTTTACTCTAATTCTTTAACCTTAGGAAAC 1433 ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 1372 TTCACAGTTGGTGCTTCTTCTCATGATAGAGTTTACTCCAATTCTTTAATTTTAGGAAAC 1431 Query 1434 AATGTAACTATTCCAGGCATGGGATTCGCAATTCCTACAGAT-AGTGGAAAAATGTACAA 1492 ||||||||||||| |||||| ||||||||||||||||| ||| | |||||| |||||||| Sbjct 1432 AATGTAACTATTCAAGGCATTGGATTCGCAATTCCTACGGATGA-TGGAAAGATGTACAA 1490 Query 1493 GATGATATCTGCTTTTCATGCCTTGAACAATAGTACTTCTGTAGATAAAGATATGTATGT 1552 |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 1491 GATGATCTCTGCTTTTCATGCCTTGAACAAAAGTACTTCTGTAGATAGAGATATGTATGT 1550 Query 1553 AGGTGAATGTCAAGATTATGAAAACTTCGATCAAGATCGTGTCTCAGGGAAACTTTTGAT 1612 |||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||| |||| Sbjct 1551 AGGTGAATGTCAAGATTATGAAAACTACGATCAAGATCTTGTCTCGGGGAATCTTCTGAT 1610 Query 1613 ATGTAGCTACTCTGCTCGTTTTGTTCTCGGGCTTTCGACTATAAAACAAGCTTTAGATGT 1672 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1611 ATGTAGCTACTCTGCTCGTTTTATTCTCGGGATTTCGACTATAAAACAAGCTTTAGATGT 1670 Query 1673 TGCCAAGAATCTATCCGCGACTGGTGTGATATTCTATATAGACCCGTATGTTCTTGGTTT 1732 ||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||| Sbjct 1671 TGCCAAGAATCTATCTGCGATTGGCGTGGTATTCTATATAGACCCGTATGTTCTTGGTTT 1730 Query 1733 TGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTCCATCTGTAGAAGATTC 1792 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1731 TGAGATCAATCCAACACCGATGGATATGCCCGGAATCATAATTCCATCTGTAGAAGATTC 1790 Query 1793 CAAG---ACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGATGTAACCACTAAAGA 1849 ||| | ||||||||| ||||||||||||||| |||||||||||| |||||| ||||| Sbjct 1791 TAAGGTGATTTTACTCAAATACTATAACTCTTCTCTTCAAAGAGATGGAACCACCAAAGA 1850 Query 1850 AATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAATGCTAACTTTAGTAA 1909 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct 1851 AATTGTTAGTTTTGGAGCGGTTGCAGCCATTGAAGGCGGTTTAAATGCTAACTTCAATAA 1910 Query 1910 CAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCTGAAGACAACTCTTT 1969 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1911 TAGAGCTCCCAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCTGAAGACAACTCTTT 1970 Query 1970 TAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAACTCTATTTGGGGTGC 2029 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1971 TAACGACGCAGACATATTAAAACCGAACCTCGTAGCTCCTGGAAACTCTATTTGGGGTGC 2030 Query 2030 TTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAAATTTGCGATGATGTC 2089 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2031 TTGGAGTTCTGTTTCAACCGATTCTACCGAGTTTGAAGGTGAGAAATTTGCGATGATGTC 2090 Query 2090 CGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTAATCAAACAAAGTTA 2149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2091 CGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTAATCAAACAAACTTA 2150 Query 2150 TCCACAGTTTACTCCTTCAACAA-TCT-CATCCGCGCTTTCAACAACGGCTCTCCTAAAT 2207 ||||| |||||||||||| ||| | | |||| |||||||||||||| || || || ||| Sbjct 2151 CCCACAATTTACTCCTTCA-CAAAT-TGCATCTGCGCTTTCAACAACTGCGCTTCTTAAT 2208 Query 2208 GATAATAAAGGCAGTCCGATAATGGCTCAGCGAACTTATTCCAATCCCGATCAAAGCCTC 2267 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2209 GATAATAAAGGCGGTCCGATAATGGCTCAGCGAACTTATTCCAATCCCGATCAAAGCCTC 2268 Query 2268 TATACCGCAACACCGTCTGATATGGGGAGCGGTTTTGTTAACGCAACGGCAGCTTTAGAC 2327 |||||||||||||||| ||||||||| |||||||| ||||| ||||| |||||||||||| Sbjct 2269 TATACCGCAACACCGTTTGATATGGGAAGCGGTTTCGTTAATGCAACCGCAGCTTTAGAC 2328 Query 2328 CCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATCATTTCTTTGTGGGATCAAC 2387 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2329 CCTGGTCTAGTATTCGATACAAGTTTTGAAGATTATATGTCATTTCTTTGTGGGATCAAC 2388 Query 2388 GGCTCGGATACGGTGGTATTCAACTACACCGGATTCCGCTGTCCCGCTAACAACACACCA 2447 ||||||||| || |||||||||||||||||||||| |||||| || |||| |||||| || Sbjct 2389 GGCTCGGATCCGTTGGTATTCAACTACACCGGATTTCGCTGTTCCACTAAAAACACAACA 2448 Query 2448 GTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTATCGACACTTAGTGGCACACAA 2507 ||| ||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| Sbjct 2449 ATCAATGGTTTTGACCTCAATTTGCCGTCAATTACAGTTTCAACACTTAGTGGCACGCAA 2508 Query 2508 ACTTTCCAAAGATCGATGAGAAACATAGCCGGCAATGAGACATACAATGTTGGTTGGAGT 2567 | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2509 ATTTTCCAAAGATCAATGAGAAACATAGCCGGAAATGAGACATACAATGTTGGTTGGAGT 2568 Query 2568 CCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCAATTTTCTATTGCTATGGGAGAA 2627 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 2569 CCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCAATTTTCTATAGCGATGGGAGAA 2628 Query 2628 AATCAAGTACTTAGCGTAACCCTCACGGTGACAAAGAACAGTTCCAGTTCTAGTTTTGGC 2687 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2629 ACTCAAGTACTTAGCGTAACCCTCACGGCAACAAAGAACAGTTCCAGTTCTAGTTTTGGT 2688 Query 2688 AGAATCGGATTGTTTGGAAATACAGGACACATTGTTAATATTCCTGTAACTGTCATAGCG 2747 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2689 AGACTCGGATTGTTTGGAAATACAGGACACATTGTTAATATTCCTGTAACTGTCATAGCG 2748 Query 2748 AAAATCGCTTCGAGCTGATGATAGATAATTTTTCTTT-TACCATTCAATTGTTAAAG-GT 2805 ||||||||||||||||||||| | || |||||| || | |||||||||||||||| || Sbjct 2749 AAAATCGCTTCGAGCTGATGA-ATATC-TTTTTCGTTAT-CCATTCAATTGTTAAAACGT 2805 Query 2806 ACATTTTTTATTTGATGCAATGTAAAACCATATAATT-AAGT-AA-A-CTCTAATCTTCA 2861 |||||||| |||||||||||| |||||||||| || | |||| || | ||| |||||||| Sbjct 2806 ACATTTTT-ATTTGATGCAATTTAAAACCATAGAAATGAAGTCAAGAACTCCAATCTTCA 2864 Query 2862 AGC 2864 ||| Sbjct 2865 AGC 2867 > Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883 Length=2574 Score = 1738 bits (941), Expect = 0.0 Identities = 1918/2383 (80%), Gaps = 93/2383 (4%) Strand=Plus/Plus Query 429 AAGTTTAC---ACCAAAATTGCGACCAAGGAACAATTCAAGGAAACGTCATGGGAAG-TC 484 |||||||| ||||||| | | ||||||||||| ||||| | |||| || || || || Sbjct 226 AAGTTTACTAGACCAAAACTCCAACCAAGGAACATTTCAAAGTCACGTTATTGG-AGATC 284 Query 485 AAAGAT-ACCATCTGTTGTTCAATCTCATGACTCTTTCTTGAGAAA-GAC-TCTAAAAGG 541 ||| | |||| | ||| |||| ||||||||||||| |||||||| | | | | || || Sbjct 285 -AAGGTGACCAGCAATTGCTCAAGCTCATGACTCTTTGTTGAGAAATG-CAT-TGAAGGG 341 Query 542 AGAGAAGTATATAAAGCTTTATAG-TTACCATTATCTTATCAATGGATTTGCTCTGTTTA 600 |||||||||||||||||||||||| || ||||||||| |||||||| |||||| | ||| Sbjct 342 AGAGAAGTATATAAAGCTTTATAGCTT-CCATTATCTCATCAATGGTTTTGCTGTCTTTG 400 Query 601 TTAACTCACAACAGGCTGAGAAGCTTTCAATGAGAAAAGAAGTAGCAAACATAGTGTTGG 660 ||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||| Sbjct 401 TTAGCTCACAACAGGCTGAGAAGCTGTCAAGGAGAGGGGAAGTAGCAAACATAGTGTTGG 460 Query 661 ATTACTCTGTTAGGACAGCAACAACTTATACTCCACAGTTTATGGGTTTACCACAAGGAG 720 ||| |||||||| || |||||||||||||| || ||||| |||||| ||||| |||| | Sbjct 461 ATTTTTCTGTTAGAACGGCAACAACTTATACACCTCAGTTCATGGGTCTACCAAAAGGTG 520 Query 721 CATGGGTCAAAGAAGGTGGATTTGAGATTGCTGGAGAAGGAGTTATAATCGGTTTTATCG 780 ||||||| ||||||||||||||||| | ||||||||||||| || | ||||| ||||||| Sbjct 521 CATGGGTTAAAGAAGGTGGATTTGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTATCG 580 Query 781 ATACTGGGATCGATCCGAA-TCATCCTAGTTTCAATGACAATG--AC-TCTAAGCGTTCA 836 | ||||| || || || || ||| ||||||||||||| || || || || |||| ||| Sbjct 581 ACACTGGCATTGA-CCCAACTCACCCTAGTTTCAATGGCACTGACACTTCCCAGCG-TCA 638 Query 837 -TATCCAATCCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCAGG 895 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 639 GTATCCGATCCCTAATCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCGGG 698 Query 896 ATCTTGCAATAAGAAGCTTATTGGAGCACGGCATTTCGCGCAATCCGCTGTAACCAGAGG 955 || |||| || ||||||| ||||||| || ||||||||||| || ||| | || ||||| Sbjct 699 CTCGTGCAGTAGGAAGCTTGTTGGAGCCCGCCATTTCGCGCAGTCAGCTATTACTAGAGG 758 Query 956 AATCTTT-AACTCATCTGAAGATTACGCTTCTCCTTTCGATGGAGATGGACATGGAACAC 1014 || ||| || |||||||| || || ||||| ||||| || || ||||| ||||| || | Sbjct 759 CAT-TTTCAATTCATCTGAGGACTATGCTTCACCTTTTGACGGCGATGGCCATGGCACGC 817 Query 1015 ACACAGCTTCGGTTGCAGCGGGTAACCACGGAGT-TCCAGT-GATAGTTTCTAACCATAA 1072 |||||||||| | |||||||||||||| || || || || | |||||||| ||||| Sbjct 818 ACACAGCTTCCATCGCAGCGGGTAACCATGGGGTCTC-AGCAG-TAGTTTCTGGTCATAA 875 Query 1073 CTTTGGATAC-GCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGT 1131 ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 876 CTTTGGA-AGTGCTAGTGGAATCGCTCCTCGTGCACATATTTCTGTTTACAAGGCATTAT 934 Query 1132 ATAAGAGTTTTGGAGGTTTTGCTGCAGATGTTGTAGCAGCTATAGATCAGGCAGCTCAAG 1191 ||||||||||||| || ||||||||||||||||| || |||||||||||||||||||||| Sbjct 935 ATAAGAGTTTTGGGGGATTTGCTGCAGATGTTGTTGCTGCTATAGATCAGGCAGCTCAAG 994 Query 1192 ATGGAGTAGATATATTAAGCCTATCAATTACACCGAATCGGAAA-CCTCCCGGTGTTGCC 1250 ||||||| || |||||||| ||||| || ||||| ||||| | ||||| ||||| ||| Sbjct 995 ATGGAGTTGACATATTAAGTCTATCCATCACACCAAATCG-ACGTCCTCCTGGTGTAGCC 1053 Query 1251 ACTTTCTTTAATCCTATC-GACATGGC-ATTACTTTCCGCTGTAAAAGCCGGAATCTTCG 1308 || |||||||| || || || ||||| || || |||||||| || || || || |||| Sbjct 1054 ACGTTCTTTAACCC-ATTAGATATGGCTATG-CTATCCGCTGTTAAGGCTGGTATATTCG 1111 Query 1309 TAGTCCAAGCTGCGGGAAATACCGGTCCAGCGCCTAAAACCATGTCTTCTTTTAGTCCTT 1368 | || |||||||| ||||| || ||||| | ||||| | |||||| || || || || | Sbjct 1112 TTGTGCAAGCTGCAGGAAACACAGGTCCCTCTCCTAAGAGCATGTCCTCCTTCAGCCCAT 1171 Query 1369 GGATATTCACCGTTGGTGCTTCTTCTCATGATAGAGTTTACTCTAATTCTTTAAC-CTTA 1427 |||| ||||| ||||||||| || |||| ||| |||||||||||||||| ||| || | Sbjct 1172 GGATTTTCACAGTTGGTGCTGCTACTCACGATCGAGTTTACTCTAATTCGATAATTCT-A 1230 Query 1428 GGAAACAATGTAACTATTCCAGGCATGGGA-TTCGCAATTCCTACAGAT-AGTGGAAAAA 1485 || ||||||||| ||||||||||||| ||| || ||| ||||||||||| | || || Sbjct 1231 GGCAACAATGTATCTATTCCAGGCATAGGACTT-GCACTTCCTACAGATGAA-GGCAAGG 1288 Query 1486 TGTACA-AGATGATATCTGCTTTTCATGCCTTGAACAATAGTACTTCT-GTA---GATAA 1540 |||||| | ||||| |||||| || |||| ||||| || | | || | ||| || || Sbjct 1289 TGTACACA-ATGATCTCTGCTCTTGATGCATTGAAGAACAAAAGTT-TAGTACTCGACAA 1346 Query 1541 AGATATGTATGTAGGTGAATGTCAAGATTATGAAAACTTCGATCAAGATCGTG-TCTCA- 1598 ||| ||||||||||||||||| ||||| ||||| | ||||||| ||||| | || | Sbjct 1347 AGACATGTATGTAGGTGAATGCCAAGACTATGACAGCTTCGATAAAGATA-TCATC-CGT 1404 Query 1599 GGGAAACTTTTGATATGTAGCTACTCTGCTC-GTTTTGTTCTCGGGCTTTCGACTATAAA 1657 ||||| ||| ||||||||||||||||| || |||| || ||||| ||||| ||||| || Sbjct 1405 GGGAATCTTCTGATATGTAGCTACTCTA-TCCGTTTCGTGCTCGGACTTTCCACTATTAA 1463 Query 1658 ACAAGCTTTAGATGTTGCCAAGAATCTATCCGCGACTGGTGT-GATATTCTATATAGACC 1716 ||||||||||| |||| ||||||||||||| || | ||||| | | ||||| || |||| Sbjct 1464 ACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAAGGGTGTTG-TGTTCTACATGGACC 1522 Query 1717 CGTATGTTCTTGGTTTTGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTC 1776 | ||||| ||||||||| |||| || || ||||| ||||| |||||||| |||||||||| Sbjct 1523 CTTATGTCCTTGGTTTTCAGATTAACCCTACACCAATGGACATGCCCGGCATCATAATTC 1582 Query 1777 CATC-TGTAGAAGATTCCAAGACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGAT 1835 |||| | ||||||||||||| ||||||||||||||||||||||||| || ||||||| Sbjct 1583 CATCCTC-AGAAGATTCCAAGGTTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGAT 1641 Query 1836 GTAACCACTAAAGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAAT 1895 | |||||| ||||| |||||||| ||||| || ||||| ||||| | ||| || |||| Sbjct 1642 GGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGCGGCCATTGCAGGTGGACAAAAT 1701 Query 1896 GCTAACTTTAGTAACAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCT 1955 |||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct 1702 GCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTACTCAGCAAGAGGACCTGATCCA 1761 Query 1956 GAAGACAAC-TCTTTTAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAA 2014 ||||||| | ||||| |||||||| ||| | || ||||| || || ||||| |||||||| Sbjct 1762 GAAGACAGCCTCTTT-AACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAA 1820 Query 2015 CTCTATTTGGGGTGCTTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAA 2074 || |||||||||||||||||||| ||| | || || || || ||||||||||| |||| Sbjct 1821 TTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAAGGAGAGAG 1880 Query 2075 ATTT-GCGATGATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 2133 ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1881 -TTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 1939 Query 2134 TAATCAAACA-AAGTT-ATCCACAGTTTACTCCTTCAACAATCT-CATCCGCGCTTTCAA 2190 | |||| || || || | | | |||| ||||||| | || | |||| || || |||| Sbjct 1940 TGGTCAAGCAGAAATTCAGAAA-A-TTTAGTCCTTCATCTAT-TGCATCTGCACTGTCAA 1996 Query 2191 CAACGGCTCTCCTAAATGATAATAAAGGC-AGTCCGATAATGGCTCAGCGAACTTATTCC 2249 |||| || | || ||| |||||||| || | |||||||||||| || ||||| | Sbjct 1997 CAACCTCTGTTCTTTTTGACAATAAAGGTGAGGC-GATAATGGCTCAACGTGCTTATGCT 2055 Query 2250 AATCCCGATCAAAGCCTCTATACC-GCAACACCGTCTGATATGGGGAGCGGTTTTGTTAA 2308 ||||| ||||||| ||| | | || ||||| || | ||||||||||| || ||||| || Sbjct 2056 AATCCTGATCAAACCCTATCT-CCTGCAACCCCATTTGATATGGGGAATGGCTTTGTGAA 2114 Query 2309 CGCAACGGCAGCTTTAGACCCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATC 2368 ||||| |||||||| || ||||| ||| | |||||||| ||||||||||| ||||| || Sbjct 2115 TGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACTATATGTC 2174 Query 2369 ATTTCTTTGTGGGATCAACGGCTCGGATACGGTGGTATTCAACTACACCGG-ATTCCGCT 2427 |||||||||||| ||||| || || | | | ||||| |||||||||||||| | | Sbjct 2175 ATTTCTTTGTGGAATCAATGGATCAGCTCCAGTGGTTTTCAACTACACCGGCAAAAAT-T 2233 Query 2428 GTCCCGCTAA-CAACACACCAGTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTA 2486 || ||| | ||| || || |||| || |||||||||||||||||| || || || Sbjct 2234 GTTT-GCTTAGCAATGCAACAATCAGCGGAGCTGACCTCAATTTGCCATCCATCACTGTC 2292 Query 2487 TCGACACTTAGTGGCACACAAACTTTCCAAAGATCGA-TGAGAAACATAGCCGGCAATGA 2545 ||| |||| ||| | |||| |||||||| | | ||| |||||| || || ||||| Sbjct 2293 GCGAGGCTTAACAACACTCGAACTATCCAAAGA-CTAATGACAAACATTGCTGGAAATGA 2351 Query 2546 GACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCA 2605 ||| || | ||| ||| || |||||||| || ||||| |||||||||| |||||||| Sbjct 2352 GACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAAGTATCTCCTACTCA 2411 Query 2606 ATTTTCTATTGCTA-TGG-GAGA-AAATCAAGTACTTAGCGTAACCCTCACGGTGACA-A 2661 ||| ||||| || | ||| |||| ||| | ||||||| |||| |||||| | | | | Sbjct 2412 ATTCTCTATAGCCAGTGGAGAGACAAAGC---TACTTAGTGTAATCCTCACAGCAA-AGA 2467 Query 2662 AGAACAGTTCCAGTT-CTAGTTTTGGCAGAATCG-GATTGTTTGGAAATACAGGACACAT 2719 ||||||| || | || |||||||||| ||| || | || ||||||| ||||||| | Sbjct 2468 AGAACAGCTCTA-TTGCTAGTTTTGGGAGAGTCAAGCTT-TTTGGAACCGCAGGACATGT 2525 Query 2720 TGTTAATATTCC--TGTAACTGTCATAGCGAAAATCGCTTCGA 2760 |||| ||||||| ||| |||||| || ||||||||| |||| Sbjct 2526 TGTTCATATTCCGATGT--CTGTCACAGTGAAAATCGCCTCGA 2566 > Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109 Length=1218 Score = 795 bits (430), Expect = 0.0 Identities = 939/1183 (79%), Gaps = 42/1183 (4%) Strand=Plus/Plus Query 1599 GGGAAACTTTTGATATGTAGCTACTCTGCT-CGTTTTGTTCTCGGGCTTTCGACTATAAA 1657 ||||| ||| ||||||||||||||||| | ||||| || ||||| ||||| ||||| || Sbjct 49 GGGAATCTTCTGATATGTAGCTACTCT-ATCCGTTTCGTGCTCGGACTTTCCACTATTAA 107 Query 1658 ACAAGCTTTAGATGTTGCCAAGAATCTATCCGCGACTGGTG-TGATATTCTATATAGACC 1716 ||||||||||| |||| ||||||||||||| || | |||| || | ||||| || |||| Sbjct 108 ACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAAGGGTGTTG-TGTTCTACATGGACC 166 Query 1717 CGTATGTTCTTGGTTTTGAGATCAATCCAACACCGATGGATATGCCCGGGATCATAATTC 1776 | ||||| ||||||||| |||| || || ||||| ||||| |||||||| |||||||||| Sbjct 167 CTTATGTCCTTGGTTTTCAGATTAACCCTACACCAATGGACATGCCCGGCATCATAATTC 226 Query 1777 CAT-CTGTAGAAGATTCCAAGACTTTACTCAAGTACTATAACTCTTCTATTCAAAGAGAT 1835 ||| || ||||||||||||| ||||||||||||||||||||||||| || ||||||| Sbjct 227 CATCCT-CAGAAGATTCCAAGGTTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGAT 285 Query 1836 GTAACCACTAAAGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATAGAAGGCGGTTTAAAT 1895 | |||||| ||||| |||||||| ||||| || ||||| ||||| | ||| || |||| Sbjct 286 GGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGCGGCCATTGCAGGTGGACAAAAT 345 Query 1896 GCTAACTTTAGTAACAGAGCTCCTAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCT 1955 |||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct 346 GCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTACTCAGCAAGAGGACCTGATCCA 405 Query 1956 GAAGACA-ACTCTTTTAACGACGCAGACGTATTAAAACCGAACCTCGTAGCACCTGGAAA 2014 ||||||| ||| ||||||||||| ||| | || ||||| || || ||||| |||||||| Sbjct 406 GAAGACAGCCTC-TTTAACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAA 464 Query 2015 CTCTATTTGGGGTGCTTGGAGTTCTGCTTCAACGGATTCTACCGAGTTTGAAGGTGAGAA 2074 || |||||||||||||||||||| ||| | || || || || ||||||||||| ||| | Sbjct 465 TTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAAGGAGAG-A 523 Query 2075 ATTT-GCGATGATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 2133 ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 524 GTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCAT 583 Query 2134 TAATCAAACA-AAGTT-ATCCACAGTTTACTCCTTCAACAATCT-CATCCGCGCTTTCAA 2190 | |||| || || || | | | |||| ||||||| | || | |||| || || |||| Sbjct 584 TGGTCAAGCAGAAATTCAGAAA-A-TTTAGTCCTTCATCTAT-TGCATCTGCACTGTCAA 640 Query 2191 CAACGGCTCTCCTAAATGATAATAAAGGC-AGTCCGATAATGGCTCAGCGAACTTATTCC 2249 |||| || | || ||| |||||||| || | |||||||||||| || ||||| | Sbjct 641 CAACCTCTGTTCTTTTTGACAATAAAGGTGAGGC-GATAATGGCTCAACGTGCTTATGCT 699 Query 2250 AATCCCGATCAAAGCCTCTATACC-GCAACACCGTCTGATATGGGGAGCGGTTTTGTTAA 2308 ||||| ||||||| ||| | | || ||||| || | ||||||||||| || ||||| || Sbjct 700 AATCCTGATCAAACCCTATCT-CCTGCAACCCCATTTGATATGGGGAATGGCTTTGTGAA 758 Query 2309 CGCAACGGCAGCTTTAGACCCTGGTCTAGTTTTTGATACAAGTTTTGAAGATTATATATC 2368 ||||| |||||||| || ||||| ||| | |||||||| ||||||||||| |||| || Sbjct 759 TGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACCATATGTC 818 Query 2369 ATTTCTTTGTGGGATCAACGGCTCGGATACGGTGGTATTCAACTACACCGG-ATTCCGCT 2427 ||||||||||||||| || || || | | | ||||||||||||||||| || | | Sbjct 819 ATTTCTTTGTGGGATAAATGGATCAGCTCCAGTGGTATTCAACTACACTGGCAAGAAT-T 877 Query 2428 GTCCCGCTAA-CAACACACCAGTCAGTGGTTTTGACCTCAATTTGCCATCAATTACAGTA 2486 ||| || | ||| || || |||| || | |||||||||||||||||| || || || Sbjct 878 GTCTT-CTTAGCAATGCAACAATCAGCGGATCTGACCTCAATTTGCCATCCATCACTGTC 936 Query 2487 TCGACACTTAGTGGCACACAAACTTTCCAAAGATCGAT-GAGAAACATAGCCGGCAATGA 2545 || | |||| ||| | |||| |||||||| | || || |||||| || || ||||| Sbjct 937 TCAAGGCTTAACAACACTCGAACTGTCCAAAGA-CTATTGACAAACATTGCTGGAAATGA 995 Query 2546 GACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAAGTATCACCTACTCA 2605 ||| || | ||| ||| || |||||||| || ||||| |||| ||||| |||||||| Sbjct 996 GACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAGGTATCTCCTACTCA 1055 Query 2606 ATTTTCTATTGCTA-TGG-GAGA-AAATCAAGTACTTAGCGTAACCCTCACGGTGACA-A 2661 ||| ||||| || | ||| |||| ||| | ||||||| |||| |||||| | | | | Sbjct 1056 ATTCTCTATAGCCAGTGGAGAGACAAAGC---TACTTAGTGTAATCCTCACAGCAA-AGA 1111 Query 2662 AGAACAGTTCCAGTT-CTAGTTTTGGCAGAATCG-GATTGTTTGGAAATACAGGACACAT 2719 ||||||| || | || |||||||||| ||| || | || ||||||| ||||||| | Sbjct 1112 AGAACAGCTCTA-TTGCTAGTTTTGGGAGAGTCAAGCTT-TTTGGAACCGCAGGACATGT 1169 Query 2720 TGTTAATATTCC--TGTAACTGTCATAGCGAAAATCGCTTCGA 2760 |||| ||||||| ||| |||||| || ||||||||| |||| Sbjct 1170 TGTTCATATTCCGATGT--CTGTCACAGTGAAAATCGCCTCGA 1210 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108100115310 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5