BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G45650.1
Length=2543
Score E
Sequences producing significant alignments: (Bits) Value
Ahg494419 jgi|Araly1|494419|fgenesh2_kg.8__235__AT5G45650.1 3980 0.0
Ahg494420 jgi|Araly1|494420|fgenesh2_kg.8__236__AT5G45640.1 887 0.0
> Ahg494419 jgi|Araly1|494419|fgenesh2_kg.8__235__AT5G45650.1
Length=2541
Score = 3980 bits (2155), Expect = 0.0
Identities = 2418/2547 (95%), Gaps = 10/2547 (0%)
Strand=Plus/Plus
Query 1 ATAAATAGCCCATCAAACCCCTACAACGGATTAGGGCTATAACATTCCACCAAACACAAA 60
||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||
Sbjct 1 ATAAATAGCCCATCAAACCCCTAGAAAGGATTAGGGCTATAACATTTCACCAAACTCAAA 60
Query 61 AGATACAAGTTTAAGACCATGAAGAAGCTTACTTCTCTCTTCCCTCTCCTCTTTCTCATT 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 61 AGATACAAGTTTAAGACCATGAAGAAGCTAACTTCTCTCTTCCCTCTCCTCTTTCTCGTT 120
Query 121 CCCCTCTTAGCCTCATGTGCTGAAGAAAAACAGGTGTATATTGTCTATTTTGGAGAACAT 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 121 CCCCTCTTAGCCTCATGTGCTGATGAAAAACAGGTGTATATTGTCTATTTTGGAGAACAT 180
Query 181 AAAGGTGATAAAGCCTTTCATGAAATTGAAGAACATCATCATTCTTATCTTCAATCGGTT 240
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 181 AAAGGTGATAAAGCCTTACATGAAATAGAAGAACATCATCATTCTTATCTTCAATCGGTT 240
Query 241 AAAGAATCCGAAGAAGACGCTAGAGCATCGCTCTTGTATAGCTACAAACATAGCATCAAT 300
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 241 AAAGAATCCGAAGAAGACGCCAGAGCATCGCTATTGTATAGCTACAAACATAGCATCAAT 300
Query 301 GGCTTCGCGGCTGAGCTAACCCCTGACCAAGCCTCTAAACTAGAAAAATTAGCAGAGGTT 360
||||| ||||||||| |||| || ||||||||||| |||||||||||||| |||||||||
Sbjct 301 GGCTTTGCGGCTGAGTTAACACCAGACCAAGCCTCGAAACTAGAAAAATTGGCAGAGGTT 360
Query 361 GTTTCAG-TATTCAAGAGCCATCCAAGAAAATATGAAGCACATACGACACGGTCATGGGA 419
||||| | ||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 361 GTTTC-GATATTCAAGAGCCATCCAAGAAAATATGAAGCGCATACAACACGGTCGTGGGA 419
Query 420 ATTTGTAGGATTGGAGGAGGAAGAAACCGACAGTGATGTTCCACGTCGAAAAAATGATGC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ATTTGTAGGATTGGAGGAGGAAGAAACCGACAGTGATGTTCCACGTCGAAAAAATGATGC 479
Query 480 CGATGATCGGTTTCGTGTGGGAAGAAATTTTTTGAAGAAGGCAAAGCATGGTGATGGAAT 539
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 480 GGATGATCGGTTTCGAGTGGGGAGAAATTTTTTGAAGAAGGCAAAGCATGGTGATGGAAT 539
Query 540 CATCGTCGGTGTTCTCGACAGTGGTGTGTGGCCAGAATCAAAGAGTTTCAATGACAAAGG 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CATCGTCGGTGTTCTTGACAGTGGTGTGTGGCCAGAATCAAAGAGTTTCAATGACAAAGG 599
Query 600 AATGGGACCAGTTCCAAAATCATGGAAAGGAATCTGCCAAACCGGAGTTGCCTTTAACTC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 AATGGGACCAGTTCCAAAATCATGGAAAGGAATCTGCCAAACCGGAGTTGCCTTTAACTC 659
Query 660 TTCTCACTGTAACCGGAAAATTATTGGAGCGAGGTATTACGTGAAAGGGTACGAAAGATA 719
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 660 TTCTCACTGTAACCGGAAAATTATTGGAGCGAGGTATTACGTGAAAGGATACGAAAGATA 719
Query 720 TTACGGAGCGTTCAACGCTACAGCAAAC-AAAGACTTCTTGTCTCCAAGAGATCCCGACG 778
||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||
Sbjct 720 TTACGGAGCGTTCAACGTTACAG-AAACCAAAGACTTCTTGTCTCCACGAGATCCCGACG 778
Query 779 GACATGGGTCCCACACAGCTTCTACTGCCGTTGGCCGTCGAGTTCT-CGGTGCATCCGCA 837
||||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||
Sbjct 779 GACATGGGTCCCACACAGCCTCTACTGCTGTTGGCCGTCGAGT-CTACGGTGCATCCGCA 837
Query 838 CTTGGCGGTTTCGCCAAGGGCTCGGCATCGGGCGGTGCACCGTTAGCTCGTCTAGCTATT 897
|||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||
Sbjct 838 CTTGGCGGTTTCGCCATGGGCTCAGCCTCGGGCGGTGCACCGTTAGCTCGTCTAGCTATA 897
Query 898 TACAAAGCTTGTTGGGCCAAGCCCAATGCGGAAAAAGTTGAAGGAAATATCTGTCTAGAA 957
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 898 TACAAAGCTTGTTGGGCCAAGCCCAATGTGGAAAAAGTTGAAGGAAATACCTGTCTAGAA 957
Query 958 GAGGACATGCTTGCCGCGATCGATGACGCCATCGCTGATGGCGTTCACGTCATCAGCATT 1017
||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 958 GAGGACATGCTCGCCGCGATAGATGACGCGATCGCTGATGGCGTTCACGTCATCAGCATT 1017
Query 1018 TCCATCGGAACGACCGAGCCTTTTCCATTTACACAAGATGGAATCGCGATGGGGGCGTTG 1077
|| ||||||||| ||||||||| ||||||| |||||| |||||||| ||||||||||||
Sbjct 1018 TCGATCGGAACGTCCGAGCCTTATCCATTTTTACAAGACGGAATCGCAATGGGGGCGTTG 1077
Query 1078 CATGCGGTTAAGAGGAATATTGTGGTTGCTGCTAGCGCTGGGAATTCAGGGCCAAAGCCG 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 CATGCGGTTAAGAGGAATATTGTGGTTGCTGCTAGCGCTGGGAATTCAGGGCCAAAGCCG 1137
Query 1138 GGAACTTTGTCGAATCTGGCACCGTGGATTATAACTGTCGGAGCTAGTACTCTTGATCGG 1197
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1138 GGAACTTTGTCGAATATGGCACCGTGGATTATAACCGTCGGAGCTAGTACTCTTGATCGG 1197
Query 1198 GCTTTCGTTGGCGGTCTTGTTCTTGGCAATGGCTATACAATCAAGACGGATTCGATAACG 1257
| |||| | |||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 1198 GTTTTCATCGGCGGTCTTGTTCTTGGCAATGGCTATACAATAAAGACGAATTCCATAACG 1257
Query 1258 GCATTTAAAATGGACAAATTTGCCCCTCTTGTTTACGCTTCTAACGTGGTTGTTCCCGGC 1317
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1258 GCATTTAAAATGGACAAATTTGCCCCTCTTGTTTACGCTGCTAACGTGGTTGTTCCCGGC 1317
Query 1318 ATTGCATTGAACGAGACATCGCAATGTTTACCAAATTCACTAAAACCGGAGCTTGTGAGT 1377
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 1318 ATTGCATTGAACGATTCATCACAATGTTTACCAAATTCACTAAAACCGGAGCTTGTGACT 1377
Query 1378 GGTAAAGTGGTCTTGTGTTTAAGAGGAGCCGGTTCAAGAATCGGTAAAGGCATGGAGGTA 1437
||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||
Sbjct 1378 GGTAAAGTGGTCTTGTGTTTAAGAGGAGCCGGTACAAGAATCGGTAAAGGTATAGAGGTA 1437
Query 1438 AAACGAGCTGGAGGAGCCGGTATGATTCTCGGAAATATCGCAGCTAACGGCAATGAAGTT 1497
||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||
Sbjct 1438 AAACGAGCTGGAGGAGCTGGTATGATTCTCGGAAATGTCGCGGCTAACGGCAATGAAATT 1497
Query 1498 CCTTCAGACTCTCATTTTGTTCCGACTGCCGGGGTTACCCCAACCGTGGTCGATAAAATT 1557
|| | |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1498 CCGACGGACTCTCACTTTGTTCCGACTGCCGGGGTTACACCAACAGTGGTCGATAAAATT 1557
Query 1558 CTGGAGTACATCAAAACCGATAAAAACCCGAAGGCTTTTATCAAACCGGGGAAAACGGTT 1617
|| |||||||| |||||||||||||| |||| ||| ||||||||||| ||||||||||||
Sbjct 1558 CTAGAGTACATTAAAACCGATAAAAATCCGATGGCATTTATCAAACCAGGGAAAACGGTT 1617
Query 1618 TACAAATACCAAGCAGCTCCTTCCATGACCGGGTTTTCTAGCCGCGGCCCAAACGTTGTA 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 TACAAATACCAAGCAGCTCCTTCCATGACCGGGTTTTCTAGCCGCGGCCCAAACGTTGTA 1677
Query 1678 GACCCCAACATTCTAAAGCCGGATATAACCGC-CCCAGGACTGTACATACTGGCTGCATG 1736
|| |||||||||||||||||||| || ||||| ||| |||||| ||||||||||||||||
Sbjct 1678 GATCCCAACATTCTAAAGCCGGACATTACCGCACCC-GGACTGAACATACTGGCTGCATG 1736
Query 1737 GAGCGGAGCAGATTCACCGAGCAAAATGTCAGTAGATCAAAGAGTTGCAGGTTATAACAT 1796
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1737 GAGCGGCGCAGATTCACCGAGCAAAATGTCAGTAGATCAAAGAGTTGCAGATTATAACAT 1796
Query 1797 CTACTCAGGAACTTCAATGTCTTGTCCTCATGTCGCTGGTGCAATTGCTCTTCTCAAAGC 1856
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1797 CTACTCAGGAACTTCAATGTCTTGTCCTCATGTCGCCGGTGCAATTGCTCTTCTCAAAGC 1856
Query 1857 CATTCATCCCAAATGGAGTAGCGCTGCTATAAGATCAGCTCTTATGACCACTGCTTGGAT 1916
||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||
Sbjct 1857 CATTCATCCCAAATGGAGTAGTGCTGCTATAAGATCTGCTCTTATGACCTCTGCTTGGAT 1916
Query 1917 GACTAACGACAAGAAGAAACCGATCCAAGACACTACTGGTTTACCAGCAAACCCATTTGC 1976
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1917 GACCAACGACAAGAAGAAACCGATCCAAGACACTACTGGTTTACCCGCAAACCCATTTGC 1976
Query 1977 ACTTGGGTCAGGACATTTCAGACCAACAAAAGCTGCAGATCCCGGTTTAGTCTATGATGC 2036
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1977 ACTTGGGTCAGGACATTTCAGACCAACTAAAGCTGCAGATCCCGGTTTAGTCTACGATGC 2036
Query 2037 ATCATACCGAGCTTACCTTCTCTATGGCTGCTCGGTTAACATCACCAATATTGACCCGAC 2096
||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct 2037 ATCATACCGAGCTTACCTTCTCTATGGCTGCTCGGTTAATATTACAAATATTGACCCCAC 2096
Query 2097 ATTCAAATGTCCTAGTAAAATTCCGCCCGGTTATAATCACAATTACCCGTCAATCGCGGT 2156
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||
Sbjct 2097 ATTCAAATGTCCTAGTAAAATCCCTCCCGGTTATAATCACAACTACCCGTCAATCGCAGT 2156
Query 2157 CCCGAATCTCAAGAAGACGGTGACCGTTAAAAGAACAGTTACAAATGTTGGAACTGGTAA 2216
|||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||
Sbjct 2157 CCCGAATCTCAACAAGACGGTGGCCGTTAAAAGAACGGTTACAAATGTTGGAAATGGTAA 2216
Query 2217 CTCAACAAGCACATACTTATTCAGCGTTAAACCGCCATCGGGTATTTCGGTTAAGGCTAT 2276
||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 2217 CTCAACAAGTACATACTTATTCAGCGCTAAACCGCCATCGGGTGTTTCGGTTAAGGCTAT 2276
Query 2277 ACCGAATATATTGTCCTTTAACCGGATTGGTCAGAAGCAGCGGTTTAAAATCGTTATTAA 2336
||||||| | |||| |||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct 2277 ACCGAATGTTTTGTTCTTTAACCGGATTGGTCAAAAGCAGCGGTTTAAGATCGTGATTAA 2336
Query 2337 ACCACTGAAGAACCAGGTGATGAATGCGACTGAAAAGGGTCAATACCAATTTGGATGGTT 2396
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 ACCGCTAAAGAACCAGGTGATGAATGCGACTGAAAAGGGTCAATACCAATTTGGATGGTT 2396
Query 2397 TAGTTGGACAGATAAAGTCCATGTTGTGAGGAGTCCAATTGCTGTTTCCTTAGCTTGATT 2456
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2397 TAGTTGGACAGATAAAGTCCATGTTGTGAGGAGTCCTATTGCTGTTTCCTTAGCTTGATT 2456
Query 2457 GTTGTTTGCTTATTTGGGATGGTTTTATTAGTCGGTTTGGATGTTATAGAGGTCAAAGTG 2516
||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2457 GTTGTTTGCTT-TTGGGG-TGGTTTTATTAGTCGGTTTGGATATTATAGAGGTCAAAGTG 2514
Query 2517 AAAGAAATAGAAAATATTTTTCTGATC 2543
||||||||||||| | |||||||||||
Sbjct 2515 AAAGAAATAGAAATTCTTTTTCTGATC 2541
> Ahg494420 jgi|Araly1|494420|fgenesh2_kg.8__236__AT5G45640.1
Length=2394
Score = 887 bits (480), Expect = 0.0
Identities = 1122/1419 (79%), Gaps = 95/1419 (7%)
Strand=Plus/Plus
Query 96 TCTCT-TCCC-TCTCCTCTTTCTCATTCCCCTCTTAGCCTCATGTGCTGAAGAAAAACAG 153
||||| |||| ||| ||||||||| |||| |||||||| ||||| || |||| ||||||
Sbjct 13 TCTCTATCCCTTCTTCTCTTTCTCCTTCCTCTCTTAGCTTCATGCACTAAAGAGAAACAG 72
Query 154 GTGTATATTGTCTATTTTGGAGAACATAAAGGTGATAAAGCCTTTCATGAAATTGAAGAA 213
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 GTGTATATTGTTTATTTTGGAGAACATAAAGGTGATAAAGCCTTTCATGAAATTGAAGCT 132
Query 214 CATCATCATTCTTATCTTCAATCGGTTAAAGAATCCGAAGAAGACGCTAGAGCATCGCTC 273
|||||||| |||||||||||||| |||||||||||||||||||| || | | | |||||
Sbjct 133 CATCATCACTCTTATCTTCAATCTGTTAAAGAATCCGAAGAAGATGCCAAATCTTCGCTA 192
Query 274 TTGTATAGCTACAAACATAGCATCAATGGCTTCGCGGCTGAGCTAACCCCTG-ACCAAGC 332
|||||||||||||| |||||||||||||||||||||||||||||||| | || |||||||
Sbjct 193 TTGTATAGCTACAAGCATAGCATCAATGGCTTCGCGGCTGAGCTAACAC-TGGACCAAGC 251
Query 333 CTCTAAACTAGAAA-AATT-AGCAG-AGGTTGTTTCAGTATTCAAGAGCCATCCAAGAAA 389
||||| ||| ||| || | | || || || | || |||||||||||| |||| |||||
Sbjct 252 CTCTAGACTC-AAAGAACTCAA-AGGAG-TTATATCGGTATTCAAGAGCGATCCGAGAAA 308
Query 390 ATATGAAGCA-C-ATACGACACGGTCATGGGAATTTGTAGGATTGGAGGAGGAAGAAACC 447
||| ||| | | |||||||| | || |||||||||||||| || ||||||||||| |
Sbjct 309 GTAT-AAG-ATCCATACGACAAGATCGTGGGAATTTGTAGGGTTAAAGGAGGAAGAAGGC 366
Query 448 GA-------C--AGTGATG-T--T-CC--ACGTCGAAAAA-ATGATGCCGA-TGATCGGT 490
|| | ||||||| | | || ||||| | ||| |||||| || ||| ||||
Sbjct 367 GAAGATTATCGTAGTGATGGTGATGCCCCACGTC-ACAAATATGATGT-GAGTGACCGGT 424
Query 491 TTCGTGTGGGAAGAAATTTTTTGAAGAAGGCAAAGCATGGTGATGGAATCATCGTCGGTG 550
||||||| |||||||| || |||||||| ||||| || || ||||| |||| || ||||
Sbjct 425 TTCGTGTCGGAAGAAAGTTCTTGAAGAATGCAAAACACGGCGATGGGGTCATAGTTGGTG 484
Query 551 TTCTCGACAGTGGTGTGTGGCCAGAATCAAAGAGTTTCAATGACAAAGGAATGGGACCAG 610
|| |||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 485 TTATCGATAGTGGGGTGTGGCCAGAATCAAGGAGTTTCGATGACAAAGGAATGGGACCAA 544
Query 611 TTCCAAAATCATGGAAAGGAATCTGCCAAACCGGAGTTGCCTTTAACTCTTCTCACTGTA 670
||||| |||| ||||||||||||||||||||||| ||| |||| |||||||| |||||||
Sbjct 545 TTCCAGAATCTTGGAAAGGAATCTGCCAAACCGGTGTTTCCTTCAACTCTTCCCACTGTA 604
Query 671 ACCGGAAAATTATTGGAGCGAGGTATTACGTGAAAGGGTACGAAAGATATTACGGAGCGT 730
| ||| | | | | || | | | | |||||||| ||||||||||||||||
Sbjct 605 ATCGG----T-ACT--A-CGC---A--A-G--A--GGGTACGAGAGATATTACGGAGCGT 646
Query 731 TCAACGCT-ACAGCAAACAAAGACTTCTTGTCTCCAAGAGATCCC-GACGGACATGGGTC 788
|||| || | ||||||||||||||||||||||||| |||| | | || |||||||| ||
Sbjct 647 TCAATGCCGA-AGCAAACAAAGACTTCTTGTCTCCACGAGA-CGCTGATGGACATGGTTC 704
Query 789 CCACACAGCTTCTACTGCCGTTGGCCGTCGAGTTCTCGGTGCATCCGCACTTGGCGGT-T 847
|||||||||||| || | |||||| || ||||| ||||| || || || |||||| |
Sbjct 705 CCACACAGCTTCAACCGGCGTTGGTCGCCGAGTAAACGGTGTTTCTGCTCTCGGCGGTAT 764
Query 848 TCGCCAAGGGCTCGGCATCGGGCGGTGCAC-CGTTAGCTCGTCTAGCTATTTACAAAGCT 906
| || | |||| |||| || ||||| || | | || |||||||| ||| |||||||||||
Sbjct 765 T-GCTATGGGCACGGCTTCAGGCGGCGC-CTCATTGGCTCGTCTTGCTGTTTACAAAGCT 822
Query 907 TGTTGGGCCAAGCCCAATGCGGAAAAAGTT-GA-AGGAAATATCT-GTCTAGAAGAGGAC 963
|||||||| | || || |||||||| | | | ||| | || || | || || ||
Sbjct 823 TGTTGGGCGATTCCAAACACGGAAAAA-TACGCCAC-AAACA-CTTGTTTTGATGAAGAT 879
Query 964 ATGCTTGCC-GCGATCGATGACGCCATCGCTGATGGCGTTCAC-GTCATCAGCATTTCCA 1021
||| ||| | ||| | || || || || |||||||| || || || ||||| ||||| |
Sbjct 880 ATG-TTGGCTGCGTTTGACGATGCGATTGCTGATGGTGT-CAATGTTATCAGTATTTCTA 937
Query 1022 TCGGAACGACCGAGCCTTTTCC--ATTTACACAAGATGGAATCGCGATGGGGGCGTTGCA 1079
| ||| || || ||| | | |||| | |||||||| ||||| || ||||| ||
Sbjct 938 TTGGAGCGGTTGAACCTCATACGTATTTGGAG--GATGGAATAGCGATCGGAGCGTTACA 995
Query 1080 TGCGGTTAAGAG-GAATATTGTGGTTGCTGCTAGCGCTGGGAATTCAGGG-CCAAAGCCG 1137
|||||||| || || |||||||||||| ||||||||||| ||| | || || || |
Sbjct 996 CGCGGTTAAAAGAGA-TATTGTGGTTGCGGCTAGCGCTGGAAATG-ATGGACCG--GCGG 1051
Query 1138 GG-AA-CTTTGTCGAATCTGGCACCGTGGATTATAACTGTCGGAGCTAGTACTCTTGATC 1195
|| || || ||||||||| || ||||||||||| || || |||||||||| ||||||||
Sbjct 1052 GGCAAACTCTGTCGAATCCAGCTCCGTGGATTATTACCGTGGGAGCTAGTAGTCTTGATC 1111
Query 1196 GGGCTTTCGTTGGCGGTCTTGTTCTTGGCAATGGCTATACAATCAAGACGGATTCGAT-A 1254
| |||||| ||| |||||| ||||| ||||||||| | || || |||| || || |
Sbjct 1112 GATTTTTCGTAGGCCGTCTTGAACTTGGTGATGGCTATATATTCGAGTCGGACTC-ATTA 1170
Query 1255 ACGGCATTTAAA-ATGGACAAATTTGCCCCTCTTGTTTACGCTTCTAACGTGGTTGTTCC 1313
|| |||| ||| |||||||| ||||| ||||| || |||||| || |||||||||||||
Sbjct 1171 ACAACATT-AAAGATGGACAATTTTGCTCCTCTAGTCTACGCTCCTGACGTGGTTGTTCC 1229
Query 1314 CGGCATTGCATTGAACGA-GACATCGCAATGTTTACCAAATTCACTAAAACCGGAGCTTG 1372
|||| || || |||||| | ||| || ||||||||| |||||||| |||||| ||||
Sbjct 1230 CGGCGTTTCAAGGAACGACG-CATTGCTATGTTTACCGAATTCACTTTCACCGGATCTTG 1288
Query 1373 TGAGTGGTAAAGTGGT-CTTGTGTTTAAGAGG--A-GC--C-GGTTCAAGAATCGGTAAA 1425
|||| ||||||||||| || ||||| ||||| | | | ||||||| ||| ||||||
Sbjct 1289 TGAGAGGTAAAGTGGTACTA-TGTTTGAGAGGTTACGGTTCAGGTTCAACAATTGGTAAA 1347
Query 1426 GGCATGGAGGTAAAACGAGCTGGAGGAGCCGGTATGATT 1464
|| || |||||||| ||||| ||||||| |||||||||
Sbjct 1348 GGTATTGAGGTAAAGCGAGCCGGAGGAGTTGGTATGATT 1386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95873146665
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5