BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G54280.2 Length=4343 Score E Sequences producing significant alignments: (Bits) Value Ahg917116 jgi|Araly1|917116|Al_scaffold_0008_1867 6063 0.0 Ahg492062 jgi|Araly1|492062|fgenesh2_kg.7__1495__AT4G27370.1 1832 0.0 Ahg495512 jgi|Araly1|495512|fgenesh2_kg.8__1328__AT5G54270.1 307 4e-82 > Ahg917116 jgi|Araly1|917116|Al_scaffold_0008_1867 Length=3660 Score = 6063 bits (3283), Expect = 0.0 Identities = 3543/3669 (97%), Gaps = 15/3669 (0%) Strand=Plus/Plus Query 464 ATGATGTTATCGGCATCGCCGAACACACTAGCGAAAAGTTCGTTAGAGGAGATGCTTGAG 523 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 ATGATGTTATCGGCATCGCCGAACACACTAGCGAAAAGCTCGTTAGAGGAGATGCTTGAG 60 Query 524 TCTCTTCGTCAGAAAGATGAGTGTGATCGGCCTAAAGATATGCCTCCGGCGCTTCCTTCT 583 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 TCTCTTCGTCAGAAAGATGAGTGTGATCGGCCTAAAGATATGCCACCGGCGCTTCCTTCT 120 Query 584 CGGCCTAATTCAAGAGCTCGTCTTCCTTCTGCTCGTCGTTCGCTTCCGGCCAACTTTAAT 643 ||||||||||| |||||||||||||| || ||||||||||| |||||||| || |||||| Sbjct 121 CGGCCTAATTCTAGAGCTCGTCTTCCGTCGGCTCGTCGTTCACTTCCGGCGAAGTTTAAT 180 Query 644 GTTTCTAGTGTAATGGAAGATCAGAACGGAAGTGTTGTTTCTGTGACGCCTGCGGTGGAA 703 ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 181 GTTAGTAGTGTAATGGAAGATCAGAATGGAAGTGTTGTTTCTGCGACGCCTGCGGTGGAA 240 Query 704 GCTGAATCGGAAAGGAAAGAGGAAGG-GGTGAAGAGGAAAGAGAAGGATTTGGGTGTTAA 762 |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| Sbjct 241 GCTGAATCGGAAAGGAAAGAGGAAGGAGG-GAAGAGGAAAGAGAAGGATTTGGGTATTAA 299 Query 763 GAGGAATAGTTTTGGAAGCAAGAAAATGAGGACTGGTCTTAGGTCAGAGTCTCCGTATGC 822 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 300 GAGGAATAGTTTTGGAAGTAAGAAAATGAGGACTGGTCTTAGGTCAGAGTCTCCGTATGC 359 Query 823 AGCAGAGAAGGAAGAGGAGGGTGTGAAGATTAGTATC-GCTAAAGTTAGTTTGGTGGAGA 881 ||| |||||||||||||| ||||||| |||||||| | |||||||||||| |||||||| Sbjct 360 AGCTGAGAAGGAAGAGGATGGTGTGATGATTAGTA-CTGCTAAAGTTAGTCCGGTGGAGA 418 Query 882 ACACGGAGGAGCATAATAAGCCTGAGTCTGAGTGGAACAATAACGTTGAGTACTTCATCA 941 | |||||||||||| | || |||||||||||||||||||||||||||||||||||||| | Sbjct 419 ATACGGAGGAGCAT-A-AA-CCTGAGTCTGAGTGGAACAATAACGTTGAGTACTTCATTA 475 Query 942 AGAAGAAACTTCGAGTTTGGTGTCGGGTATCTAATGGGCAGTGGCAACTGGGGAAGATAC 1001 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 476 AGAAGAAACTTCGAGTTTGGTGTCGGGTATCTAATGGGCTGTGGCAACTGGGGAAGATAC 535 Query 1002 AGTCTACTTCCGCTGATACGTCGCTTGTTATGTTGTCCACTGCAAATGTTGTGAAAGTGT 1061 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 536 AGTCTACTTCTGCTGATACGTCGCTTGTTATGTTGTCCACTGAAAATGTTGTGAAAGTGT 595 Query 1062 CTACTGAAGAGCTTTTTCCTGCAAACCCAGATATATTGGAAGGTGTTGAAGATCTTATAC 1121 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 596 CTACTGGAGAGCTTTTTCCTGCAAACCCAGATATATTGGAAGGTGTTGAAGATCTTATAC 655 Query 1122 AGCTCAGTTATCTAAATGAACCATCTGTTCTTTATAACCTTCGTGTCAGATATTTGCAAG 1181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 656 AGCTCAGTTATCTAAATGAACCATCTGTTCTTTATAACCTTCGTGTCAGATATTCGCAAG 715 Query 1182 ACGTGATTTATAGTAAAGCAGGACCTGTATTGATTGCGGTCAATCCATTCAAGAATGTAG 1241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 716 ACGTGATTTATAGTAAAGCAGGACCAGTATTGATTGCGGTCAATCCATTCAAGAATGTCG 775 Query 1242 AAATTTATGGAAATGATGTTATCTCAGCTTATCAGAAGAAGGTTATGGATGCTCCACATG 1301 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 776 AAATTTATGGAAATGATGTTATCTCAGCTTATCAGAAGAAGGCTGTGGATGCTCCACATG 835 Query 1302 TCTATGCTGTGGCGGATGCAGCTTATGATGAGATGATGAGAGAAGAGAAGAATCAGTCTC 1361 | ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct 836 TTTATGCTGTGGCGGATGCCGCTTATGATGAGATGATGAGTGAAGAGAAGAACCAGTCTA 895 Query 1362 TTATAATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACTGCAAAATTTGCAATGCAGT 1421 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 TTATTATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACTGCAAAATTTGCAATGCAGT 955 Query 1422 ACTTGGCAGCTCTCGGTGGAGGTAGCTGTGGAGTAGAGTATGAAATCCTAAAAACAACCT 1481 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 956 ACTTGGCAGCTCTTGGTGGAGGTAGCTGTGGAGTAGAGTACGAAATCCTAAAGACAACCT 1015 Query 1482 GCATACTCGAAGCTTTTGGAAACGCTAAAACATCAAGAAATGCTAACTCTAGCCGATTTG 1541 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1016 GCATACTCGAAGCTTTTGGGAACGCTAAAACATCAAGGAATGCTAACTCTAGCCGATTTG 1075 Query 1542 GTAAACTCATAGAAATTCATTTTAGTGCAATGGGAAAGATATGTGGAGCCAAACTTGAAA 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1076 GTAAACTCATAGAAATTCATTTTAGTGCAATGGGAAAGATATGTGGAGCCAAACTTGAAA 1135 Query 1602 CTTTTC-TGCTAGAGAAGTCAAGAGTGGTTCAGCTGTTCAATGGCGAAAGATCCTATCAT 1660 | |||| || | || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1136 C-TTTCTTGTTTGACCAGTCAAGAGTGGTTCAGCTGTTCAATGGCGAAAGATCCTACCAT 1194 Query 1661 ATATTTTATGAGCTGTGTGCAGGTGCTTCACCGATTCTTAAAGAGAGATTGAAGCTTAAA 1720 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1195 ATATTTTATGAGTTGTGTGCAGGTGCTTCGCCGATTCTTAAAGAGAGATTGAAGCTTAAA 1254 Query 1721 ACAGCAAGTGAGTATACCTACCTGAGCCAGAGTGATTGCTTGACCATTGCCGGTGTTGAT 1780 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 ACAGCCAGTGAGTATACGTACCTGAGCCAGAGTGATTGCTTGACCATTGCCGGTGTTGAT 1314 Query 1781 GATGCTCAGAAATTTCACAAACTACTGGAAGCTTTTGACATTGTTCAAATCCCTAAAGAG 1840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 GATGCTCAGAAATTTCACAAACTACTGGAAGCTTTTGACATTGTTCAAATCCCTAAAGAG 1374 Query 1841 CATCAAGAGAGGGCATTTGCATTGCTTGCAGCAGTGTTGTGGCTAGGAAATGTATCTTTT 1900 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1375 CATCAAGAGCGGGCATTTGCATTGCTTGCGGCAGTGTTGTGGCTAGGAAATGTATCTTTC 1434 Query 1901 CGAGTTACTGACAACGAAAATCATGTGGAGGTGGTAGCGGATGAAGCTGTCGCCAATGCC 1960 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 CGAGTTACTGACAATGAAAATCATGTGGAGGTGGTAGCGGATGAAGCTGTCGCCAATGCC 1494 Query 1961 GCTATGTTAATGGGCTGCAACACAGAAGAGCTTATGGTGGTTTTGTCCACCCGTAAACTT 2020 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1495 GCTATGTTAATGGGCTGCAACGCAGAAGAGCTTATGGTGGTTTTGTCCACCCGTAAACTT 1554 Query 2021 CAAGCTGGTACGGATTGTATTGCTAAAAAACTGACATTGCGGCAGGCAACTGACATGAGG 2080 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1555 CAAGCTGGTACAGATTGTATTGCTAAAAAACTGACATTGCGGCAGGCAACTGACATGAGG 1614 Query 2081 GATGGAATAGCAAAATTTATTTATGCAAACCTATTT-GACTGGCTTGTTGAGCAAATAAA 2139 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 1615 GATGGAATAGCAAAATTTATTTATGCAAACCT-TTTCGACTGGCTTGTTGAGCAAATAAA 1673 Query 2140 CATTGCATTGGAAGTCGGTAAATCACGTACAGGAAGATCTATAAGCATCCTTGATATATA 2199 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1674 CATTGCACTGGAAGTTGGTAAATCACGTACAGGAAGATCTATAAGCATCCTTGATATATA 1733 Query 2200 TGGGTTTGAATCATTTAAGAATAACAGCTTTGAACAATTCTGTATAAACTACGCAAATGA 2259 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1734 TGGGTTTGAATCATTTAAGAATAACAGCTTTGAACAATTCTGTATAAACTATGCAAATGA 1793 Query 2260 AAGATTGCAGCAACACTTCAACCGGCATTTATTTAAACTTGAACAAGAGGAATATGAAGA 2319 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1794 AAGATTGCAGCAACACTTCAACCGGCATTTATTCAAACTTGAACAAGAGGAATATGAAGA 1853 Query 2320 AGATGGAATTGATTGGACTAAGGTCGAATTTGTAGACAATCAAGAGTGCTTAGATCTAAT 2379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1854 AGATGGAATTGATTGGACTAAGGTCGAATTTGTAGACAATCAAGAGTGCTTAGATCTAAT 1913 Query 2380 TGAGAAGAAACCAATTGGTTTGTTGTCTCTACTAGACGAGGAATCAAATTTTCCAAAAGC 2439 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1914 TGAGAAGAAACCGATTGGTTTGTTGTCTCTACTAGACGAGGAATCAAATTTTCCAAAAGC 1973 Query 2440 AACTGATTTGACCTTTGCCAACAAGCTCAAGCAACATTTGAAGACCAACTCTTGCTTCAA 2499 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1974 AACTGATTTGACCTTTGCCAACAAGCTCAAGCAACACTTGAAGACCAACTCTTGCTTCAA 2033 Query 2500 AGGAGAGAGAGGTCGAGCCTTCAGAGTTAATCATTATGCTGGAGAGGTTCTCTATGATAC 2559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2034 AGGAGAGAGAGGTCGAGCCTTCAGAGTTAATCATTATGCTGGAGAGGTTCTCTATGATAC 2093 Query 2560 AAATGGCTTTTTGGAGAAGAACAGGGATCCGTTACCTGCTGATCTTATCAATCTTTTATC 2619 |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2094 AAATGGGTTTTTGGACAAGAACAGGGATCCGTTGCCTGCTGATCTTATCAATCTTTTATC 2153 Query 2620 ATCATGCGACTGCCAGTTGCTGAAATTGTTTTCAACTAAAATGCGTGGCAAATCGCAAAA 2679 |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| || Sbjct 2154 ATCATGCGACTGCCAGCTGCTCAAATTGTTTTCAACTAAAATGCGTGACAAATCGCAGAA 2213 Query 2680 GCCACTTATGTTATCGGACTCCACGAACCAAACTGTTGGAACAAAGTTCAAGGGTCAACT 2739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2214 GCCACTTATGTTATCGGACTCCACGAACCAAACTGTTGGAACAAAGTTCAAGGGTCAACT 2273 Query 2740 TTTCAAATTGATGAACAAGTTAGAGAACACAAGTCCTCACTTCATTCGATGCATAAAGCC 2799 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2274 TTTCAAACTGATGAACAAGTTAGAGAACACAAGTCCTCACTTCATTCGATGCATAAAGCC 2333 Query 2800 GAATTCAAAGCAGCTTCCCAGAGTTTATGAAGAGGATCTTGTCTTACAACAGCTTAGATG 2859 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2334 GAATTCGAAGCAGCTTCCCAGAGTTTATGAAGAGGATCTTGTCTTACAACAGCTTAGATG 2393 Query 2860 TTGTGGCGTGTTGGAAGTTGTTAGAATATCAAGATCTGGATATCCTACTCGTTTGACACA 2919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2394 TTGTGGCGTGTTGGAAGTTGTTAGAATATCAAGATCTGGATATCCTACTCGTTTGACACA 2453 Query 2920 TCAAGAGTTTGCAGGAAGATATGGTTTCTTATTGTCAGACAAAAAGGTCGCTCAGGATCC 2979 |||||||||||| ||||||||||| ||| ||| |||||||||||||||| |||||||||| Sbjct 2454 TCAAGAGTTTGCGGGAAGATATGGGTTCCTATCGTCAGACAAAAAGGTCTCTCAGGATCC 2513 Query 2980 TCTGAGCGTATCAATTGCTGTTCTGAAACAATATGACGTTCATCCTGAAATGTATCAAGT 3039 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2514 TCTGAGTGTATCAATTGCTGTTCTGAAACAATACGACGTTCATCCTGAAATGTATCAAGT 2573 Query 3040 GGGTTACACAAAATTGTACCTCCGAACTGGACAAATTGGGATCTTTGAGGATCGGAGGAA 3099 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 2574 GGGTTACACAAAATTGTATCTCCGAACTGGACAAATTGGTATCTTTGAGGATCGGAGAAA 2633 Query 3100 AAAGGTTCTTCAAGGCATAGTGGGCTTACAAAAGCATTTCCGTGGTCACTTGTCTCGTGC 3159 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2634 AAAAGTTCTTCAAGGCATAGTGGGCTTACAAAAGCATTTCCGTGGTCACTTGTCTCGTGC 2693 Query 3160 ATACTTCCAAAATATGCGGAAAGTAACATTGGTTCTTCAGTCATATATACGAGGTGAAAA 3219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2694 ATACTTCCAAAATATGCGGAAAGTAACATTGGTTCTTCAGTCATATATACGAGGTGAAAA 2753 Query 3220 TGCCCGAAGATTGTTTGACACTGAAGCAAAATTCCATGCGGATTCTGTTTCTGAAGCAAG 3279 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2754 TGCCCGAAGAATGTTTGACACTGAAGCAAAAATCCATGCGGATTCTGTTTCTGAAGCAAG 2813 Query 3280 CACAGATGAGTTGAGTGCAGTCATACACTTGCAATCTGCGGTTCGTGGATGGTTGGCTCG 3339 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2814 CACAGATGAGTTGACTGCAATCATACACTTGCAATCTGCGGTTCGTGGATGGTTGGCTCG 2873 Query 3340 CAAACATTTCAATAGTATGCAAAGACAAAAAGAACTACGCAATGTGGCGACAAAATCAAA 3399 |||| ||||||| ||||||||||||| |||||| ||| ||||||| ||||||||||||| Sbjct 2874 TAAACGTTTCAATGGTATGCAAAGACAGAAAGAATTACTCAATGTGACGACAAAATCAAA 2933 Query 3400 GAGGAAAGCTGGCAGGAGGATTTCAGAAGACAAGGATATTCCTCTGGAGCAG-CCACAAG 3458 ||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 2934 GAGGAAAGCTGGCAGGAGGATTTCAGAAGACAAGGATATTCCTTTGGAGCAGTCC-CAAG 2992 Query 3459 TTCAACCAA-CATCTATGTCTGATCTCCAGAAACGGATTTTGAAATCTGAAGCAGCTTTA 3517 ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2993 TTCAA-CAACCATCTATGTCTGATCTCCAGAAACGGGTTTTGAAATCTGAAGCAGCTTTA 3051 Query 3518 TCGCAGAAGGAAGAAGAAAACACAGCTTTGAGAGAGCAGTTGAGGCAATTTGAGGAGAGA 3577 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3052 GCGCAGAAGGAAGAAGAAAACACAGCTTTGAGAGAGCAGTTGAGGCAATTTGAGGAGAGA 3111 Query 3578 TGGTCAGAGTATGATATAAAGATGAAGTCAATGGAGGAAACATGGCAAAAGCAAATGTCA 3637 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3112 TGGTCAGAGTATGATATAAAGATGAAGTCAATGGAGGAAACATGGCAAAAGCAAATGTCG 3171 Query 3638 TCATTGCAGATGAGTCTTGCCGCCGCTAGAAAGAGTCTAGCTGCAGAGAGCATTACGGGT 3697 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3172 TCATTGCAGATGAGTCTTGCCGCAGCTAGAAAGAGTCTAGCTGCAGAGAGCATTACGGGT 3231 Query 3698 CAAGCAGGAGGAAGACAAGACACATCGATATCACCTTTCGGTTATGACTCAGAGGACACG 3757 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3232 CAAGCAGGAGGAAGACAAGACACATCGATATCACCTTTCGGTTATGACTCAGAGGACACA 3291 Query 3758 ATGTCTACTGGAACTCCGGGAGTAAGAACTCCTACTAATAAGTTCACAAACGGAAACACT 3817 ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 3292 ATGTCTACTGGGACTCCGGGAGTAAGAACTCCTACTACTAAGTTCACTAACGGAAACACT 3351 Query 3818 CCTGAACTCAGAATCAGAGAGCTCAACGGAAGTTTGAATGCGGTTAATCATCTTGCAAGA 3877 ||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || ||| Sbjct 3352 CCTGAGCTCAGAATCAGAGAGCTTAACGGAAGCTTGAATGCGGTTAATCATCTCGCGAGA 3411 Query 3878 GAGTTTGACCAAAGGAGACTCAATTTCGATGAAGATGCAAGAGCTATTGTGGAGGTGAAG 3937 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3412 GAGTTTGACCAAAGGAGACTCAATTTCGATGAAGATGCAAGAGCTATCGTGGAGGTGAAG 3471 Query 3938 CTCGGACCTCAGGCAACTCCAAACGGGCAGCAACAGCAACATCCAGAAGATGAATTTAGG 3997 || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3472 CTTGGACCGCAGGCAACTCCAAACGGGCAGCAACAGCAGCATCCAGAAGATGAATTTAGG 3531 Query 3998 AGACTGAAGCTAAGATTTGAGACATGGAAGAAAGATTACAAAGCTAGATTAAGAGATACT 4057 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3532 AGACTGAAGCTAAGATTTGAGACATGGAAGAAAGATTACAAAGCTAGATTAAGAGATACT 3591 Query 4058 AAAGCAAGACTCCATAGAGTAGATGGTGATAAAGGTCGTCACCGGAAATGGTGGGGAAAA 4117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3592 AAAGCAAGACTCCATAGAGTAGATGGTGATAAAGGTCGTCACCGGAAATGGTGGGGAAAA 3651 Query 4118 AGAGGCTAG 4126 ||||||||| Sbjct 3652 AGAGGCTAG 3660 > Ahg492062 jgi|Araly1|492062|fgenesh2_kg.7__1495__AT4G27370.1 Length=3468 Score = 1832 bits (992), Expect = 0.0 Identities = 1924/2364 (81%), Gaps = 104/2364 (4%) Strand=Plus/Plus Query 1370 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACTGCAAAATTTGCAATGCAGTACTTGGCA 1429 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | Sbjct 826 AGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGCAAAATATGCAATGCAGTACTTGGAA 885 Query 1430 GCTCTCGGTGGAGGTAGCTGTGGAGTAGAGTATGAAATCCTAAAAACAACCTGCATACTC 1489 ||||| ||||||||||||| ||| || || ||||||||||||| |||| || || || Sbjct 886 GCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTATTCTT 945 Query 1490 GAAGCTTTTGGAAACGCTAAAACATCAAGAAATGCTAACTCTAGCCGATTTGGTAAACTC 1549 ||||||||||| || ||||||||||||||||||| ||||||||||||||| || ||||| Sbjct 946 GAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGAAAACTG 1005 Query 1550 ATAGAAATTCATTTTAGTGCAATGGGAAAGATATGTGGAGCCAAACTTGAAACTTT-TCT 1608 || || |||||||||||||||| |||||||||||| ||||| |||||||||||||| ||| Sbjct 1006 ATGGAGATTCATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTCTCT 1065 Query 1609 GCTAGAGAAGTCAAGAGTGGTTCAGCTGTTCAATGGCGAAAGATCCTATCATATATTTTA 1668 || | |||||||||||| |||||||| ||||||||| |||||||| ||||| ||||| Sbjct 1066 T-TAAACCAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATCCTACCATATCTTTTA 1124 Query 1669 TGAGCTGTGTGCAGGTGCTTCACCGATTCTTAAAGAGAGATTGAAGCTTAAAACAGCAAG 1728 | | |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 1125 TCAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGCTTAAAGCAGCAAG 1184 Query 1729 TGAGTATACC-T-ACCTGAGCCAGAGTGATTGCTTGACCATTGC-CGGTGTTGATGATGC 1785 ||| |||| | | ||| |||||| ||||||| | ||| | || | |||||||| Sbjct 1185 TGA--ATACGATTATTTGAACCAGAGCAATTGCTTAATCATGGATCGCACT-GATGATGC 1241 Query 1786 TCAGAAATTTCACAAACT-ACTGGAAGCTTTTGACATTGTTCAAATCCCTAAAGAGCATC 1844 |||||||||||||||| | | |||||||||| ||||||||||||| ||| |||| | | Sbjct 1242 TCAGAAATTTCACAAATTGA-TGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACC 1300 Query 1845 AAGAGAGG-GCATTTGCATTGCTTGCAGCAGTGTTGTGGCTAGGAAATGTATCTTTTCGA 1903 |||| | | | ||||||| |||||||||| ||||| ||||||||||||||||||||| | Sbjct 1301 AAGA-ACGTGTATTTGCACTGCTTGCAGCTGTGTTATGGCTAGGAAATGTATCTTTTAAA 1359 Query 1904 GTTACTGACAACGAAAATCATGTGGAGGTGGTAGCGGATGAAGCTGTCGCCAATGCCGCT 1963 || |||||||| ||||| ||||| || |||||||| ||||||||||| | |||| ||| Sbjct 1360 GTGACTGACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTAACTAATGTAGCT 1419 Query 1964 ATGTTAATGGGCTGCAACACAGAAGAGCTTATGGTGGTTTTGTCCACCCGTAAACTTCAA 2023 | |||||||||||||||| || |||||||||||||||||||||| || | || || ||| Sbjct 1420 ACGTTAATGGGCTGCAACTCAAAAGAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAA 1479 Query 2024 GCTGGTACG-GATTGTATTGCTAAAAAACTGACATTGCGGCAGGCAACTGACATGAGGGA 2082 ||||||| | ||||| |||||||||| ||||||| |||| ||||||||||| |||||||| Sbjct 1480 GCTGGTA-GAGATTGCATTGCTAAAAGACTGACACTGCGACAGGCAACTGATATGAGGGA 1538 Query 2083 TGGAATAGC-AAAATTTATTTATGCAAACCTATTTGACTGGCTTGTTGAGCAAATAAACA 2141 | |||| ||||| || ||||| | |||||| |||||||||||||| ||||||||| Sbjct 1539 TTCCCTAGCGAAAATC-ATCTATGCGAGCCTATTCAACTGGCTTGTTGAGAAAATAAACA 1597 Query 2142 TTGCATTGGAAGTCGGTAAATCACGTACAGGAAGATCTATAAGCATCCTTGATATATATG 2201 || || ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 1598 TTTCACTGGAAGTTGGTAACTCACGTACAGGAAGATCTATTAGCATCCTTGATATATATG 1657 Query 2202 GGTTTGAATCATTTAAGAATAACAGCTTT-GAACAATTCTGTATAAACTACGCAAATGAA 2260 ||||||| |||||| ||||||| || ||| |||||||| || |||||||| ||||||||| Sbjct 1658 GGTTTGAGTCATTTGAGAATAATAG-TTTCGAACAATTTTGCATAAACTATGCAAATGAA 1716 Query 2261 AGATTGCAGCAACACTTCAACCGGCATTTATTTAAACTTGAACAAGAGGAATATGAAGAA 2320 ||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1717 AGACTGCAGCAACATTTCAACCGTCATCTATTTAAACTTGAACAAGAGGAATATGAAGGG 1776 Query 2321 GATGGAATTGATTGGACTAAGGTCGAATTTGTAGACAATCAAGAGTGCTTAGATCTAATT 2380 ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||| Sbjct 1777 GATGGAATTGATTGGACTAAGGTCGAATTCAAAGACAATCAAGAGTGTTTAAATCTGATT 1836 Query 2381 GAGAAGAAACCAATTGGTTTGTTGTCTCTACTAGACGAGGAATCAAATTTTCCAAAAGCA 2440 ||||||||||| ||||||||| | || ||| |||| |||||||||||||||||||| || Sbjct 1837 GAGAAGAAACCCATTGGTTTGGTATCGCTATTAGATGAGGAATCAAATTTTCCAAAGGCT 1896 Query 2441 ACTGATTTGACCTTTGCCAACAAGCTCAAGCAACATTTGAA-GACCAACTCTTGCTTCAA 2499 |||||| ||| |||||||||||||||||||| |||||||| | | |||||||| ||||| Sbjct 1897 ACTGATACGACGTTTGCCAACAAGCTCAAGCAGCATTTGAATG-CTAACTCTTGTTTCAA 1955 Query 2500 AGGAGAGAGAGGTCGAGCCTT-CAGAGTTAATCATTATGCTGGAGAGGTTCTCTATGATA 2558 ||||||||||||| || || |||| |||| |||||||| ||||||||||||||| ||| Sbjct 1956 GGGAGAGAGAGGTC-AGGGTTTCAGAATTAAGCATTATGCCGGAGAGGTTCTCTATAATA 2014 Query 2559 CAAATGGCTTTTTGGAGAAGAACAGGGATCCGTTACCTGCTGATCTTATC-AATCTTTTA 2617 |||||||||| |||| |||||||| |||||| ||| || |||||||||| || |||||| Sbjct 2015 CAAATGGCTTCCTGGAAAAGAACAGAGATCCGCTACATGTTGATCTTATCCAA-CTTTTA 2073 Query 2618 TCATCATGCGACTGCCAGTTGCTGAAATTGTTTTCAACTAAAATGCGTGGCAAATCGCAA 2677 ||||||||| | || || || |||| ||||||| ||||| |||||| | | | | | Sbjct 2074 TCATCATGCAAATGTCAATTATTGAACCTGTTTTCTACTAAGATGCGTCACGAGTTTCTA 2133 Query 2678 AAGCCA-CTTATGTTATCGGACTCCACGAACCAAACTGTTGGA--ACAAAGTTCAAGGGT 2734 ||||| | | || |||||||||| ||| |||| ||| | | ||||| || ||||| Sbjct 2134 AAGCCGGCA-ACCTTTTCGGACTCCATGAATCAAAGTGT-G-ATTACAAAATTTAAGGGC 2190 Query 2735 CAACTTTTCAAATTGATGAACAAGTTAGA-GAACACAAGTCCTCACTTCATTCGATGCAT 2793 ||||||||||| ||||||||||||||||| || ||| | |||||| || ||||||||||| Sbjct 2191 CAACTTTTCAAGTTGATGAACAAGTTAGAAGA-CACCACTCCTCATTTTATTCGATGCAT 2249 Query 2794 AAAGCCGAATTCAAAGCAGCTTCCCAGAGTTTATGAAGAGGATCTTGT-CTTACAACAGC 2852 |||||| |||||||| |||||||| || |||| |||||| ||| ||| || |||||||| Sbjct 2250 AAAGCCAAATTCAAATCAGCTTCCTGGACTTTACGAAGAGAATCATGTTCT-ACAACAGC 2308 Query 2853 TTAGATGTTGTGGCGTGTTGGAAGTTGTTAGAATATCAAGATCTGGATATCCTACTCGTT 2912 |||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||| | Sbjct 2309 TTAGATGTTGTGGCGTTTTGGAAATTGTTAGAATTTCAAGATCAGGATATCCTACTCGGT 2368 Query 2913 TGACACATCAAGAGTTTGCAGGAAGATATGGTTTCTTATTGTCAG-ACA-AA-AAGGTCG 2969 |||||||||||||| |||||| ||||||||| | | || || | | ||| || || || Sbjct 2369 TGACACATCAAGAGCTTGCAGTAAGATATGGATGCCTACTG-CTGGACACAAGAATCTC- 2426 Query 2970 CTCAGGATCCTCTGAGCGTATCAATTGCTGTTCTGAAACAATATGA-CGTTCATCCTGAA 3028 | ||||| || || ||| ||||| |||| |||||||||||| | | ||| ||||||| Sbjct 2427 C-CAGGAGCCGCTTAGCACATCAAATGCTATTCTGAAACAATGCAATC-TTCCTCCTGAA 2484 Query 3029 ATGTATCAAGTGGGTTACAC-AAAATTGTACCTCCGAACTGGACAAATTGG-GATCTTTG 3086 ||||||||||| ||||| || ||||| |||||||||||||||| |||||| | || ||| Sbjct 2485 ATGTATCAAGTTGGTTATACGAAAATA-TACCTCCGAACTGGACTAATTGGCG-TCCTTG 2542 Query 3087 AGGATCGGAGGAAAA-AGGTTCTT-CAAGGCATAGTGGGCTTACAAAAGCA-TTTCCGTG 3143 |||| | || |||| | ||| || | |||||| | || ||||| ||||| |||| ||| Sbjct 2543 AGGAAAGAAG-AAAATATGTT-TTGCGTGGCATACTTGGATTACAGAAGCAATTTC-GTG 2599 Query 3144 GTCA-CTTGTCTCGTGCATACTTCCAAAATATGCGGAAAG-TAACATTGGTTCTTCAGTC 3201 || | | | |||||| || ||| || |||||| |||| | | || || | |||||||| Sbjct 2600 GTTATCAGG-CTCGTGAATGCTTTCACAATATGAGGAATGCTG-CAGTGATACTTCAGTC 2657 Query 3202 ATATATACGAGGTGAAAATGCCCGAAGATTGTTTGACACTGAAGCAAAAT--TCCATGCG 3259 |||||| || || ||||||||| | ||| | ||| || | |||| || | || Sbjct 2658 ATATATCCGCGGAGAAAATGCCAGGAGAAACT---ACATTGTGGTAAAAGAATC-A-GCT 2712 Query 3260 GATTCTGTTTCTGA-AGCAAGCACAGATGAG-TTGAGTGCAG-TCATACACTTGCAATCT 3316 ||| ||||| | ||||| || || ||| |||| ||||| | ||||||||||||| | Sbjct 2713 -ATT--GTTTCC-ACAGCAATAACTGAAGAGCTTGA-TGCAGCT-ATACACTTGCAATAT 2766 Query 3317 GCGGTTCGTGGATGGTTGGCTCGCAAACATTTCAATAGTATGCAA-AGACA-AAAAGAAC 3374 ||| || |||| ||||||| ||||| || |||||||||||| ||| | |||| ||| Sbjct 2767 ATGGTACGCAAATGGCTGGCTCGTAAACACTTAAATAGTATGCAACAGA-AGAAAA-AAC 2824 Query 3375 TACGCAATGTGGCGACAA-AATCAAAGAGGAAAG-CTG-GCAGGAGGATTTCAGAAGACA 3431 |||||||| | || || || | | || ||||| | | |||||| |||| ||||||| Sbjct 2825 CACGCAATGAGAAGA-AACAACCGA-GAAGAAAGTCAACG-AGGAGGGTTTCCGAAGACA 2881 Query 3432 AGG-A-TATTCCTCTGGAGCAGCCACAAGTTCAACCAACA-T-CTATGTCTGATCTCCAG 3487 ||| | |||| | | | | | | | ||| | || || |||||||||| Sbjct 2882 AGGTAGTATTTTT-TCCTG-ATTTATGTGACCCACCTTGTGTTCT-TG-CTGATCTCCA- 2936 Query 3488 AAAC-GGATTTTGAAA-TCTGAAGCAGCTTTA-TCGCAGAAGGAAGAAGAAAACACAGCT 3544 || | || || |||| || ||||||||| || | |||||||||||| |||||||| || Sbjct 2937 AAGCCGGGTTCAGAAAGTC-GAAGCAGCTATAAT-GCAGAAGGAAGATGAAAACACTGCA 2994 Query 3545 TTG-AGAGAGCAGTTG-AGGCAATTTGAGGAGAGATGGTCAGAGTATGATATAAAGA-TG 3601 ||| || ||| ||||| | | ||||||||| ||||||| |||| | || | |||| || Sbjct 2995 TTGCAG-GAGGAGTTGCAA-CGATTTGAGGAAAGATGGTTAGAGAACGA-AGCAAGAATG 3051 Query 3602 AAGTCAATGGAGGAAACATGGCAAAAGCAAATGTCATCATTGCAGATGAGTCTTGCCGCC 3661 ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| || || Sbjct 3052 AAGTCAATGGAGGAAACATGGCAAAAGCATATGTCGTCAATGCAGATGAGTCTCGCAGCT 3111 Query 3662 GC-TAGAAAGAGTCTAGCTGCAGA 3684 || | | |||| ||| ||| |||| Sbjct 3112 GCCT-GTAAGATTCTGGCTCCAGA 3134 Score = 379 bits (205), Expect = 8e-104 Identities = 371/448 (83%), Gaps = 23/448 (5%) Strand=Plus/Plus Query 909 CTGAGTGGAACAATAACGTTGAGTACTTCATCAAGA-AGAAACTTCGAGTTTGGTGTCGG 967 |||| |||| |||||||| |||||| || ||| ||| |||||||| | ||||||| |||| Sbjct 320 CTGAATGGATCAATAACGCTGAGTATTTTATC-AGAGAGAAACTTTGTGTTTGGTTTCGG 378 Query 968 GTAT-CTAATGGGCAGTGGCAAC-TGGGGAAGATACAGTCTACTTC-CGCTGAT-ACGTC 1023 || | ||||||||||||||| || ||||||||||||| |||||||| | |||| | || Sbjct 379 GT-TGCTAATGGGCAGTGGC-ACTTGGGGAAGATACATTCTACTTCTAG-TGATGATGT- 434 Query 1024 GCT-TGTTATGTTGTCCACT-GC-A-AATGTTGTGAAAGTGTCTACT-GAAGAGCTTTTT 1078 | | ||||||||| |||||| | | ||||||||||||| || | | || ||| |||| Sbjct 435 G-TGTGTTATGTTATCCACTAACGACGATGTTGTGAAAGTATC-AATGGAGGAGATTTTC 492 Query 1079 CCTGCAAACCCAGATATATTGGAAGGTGTTGAAGATCTTATACAGCTCAGTTATCTAAAT 1138 ||||| |||||||| || |||||||| |||||||| |||| |||||| |||||| | ||| Sbjct 493 CCTGCTAACCCAGAGATTTTGGAAGGAGTTGAAGACCTTACACAGCTTAGTTATTTGAAT 552 Query 1139 GAACCATCTGTTCTTTATAACCTTCGTGTCAGATATTTGCAAGACGTGATTTATAGTAAA 1198 ||||||||| ||||||| ||||| || |||||||| | |||||| |||||||||||||| Sbjct 553 GAACCATCTCTTCTTTACAACCTCCGGGTCAGATACTCGCAAGAATTGATTTATAGTAAA 612 Query 1199 GCAGGACCTGTATTGATTGCGGTCAATCCATTCAAGAATGTAGAAATTTATGGA-AATGA 1257 ||||| || || |||||||| || ||||| || |||||||| | || |||||| || || Sbjct 613 GCAGGGCCAGTTTTGATTGCAGTAAATCCGTTTAAGAATGTCCAGATCTATGGAGAA-GA 671 Query 1258 TG-TTATCTCAGCTTATCAGAAGAA-GGTTATGGATGCTCCACATGTCTATGCTGTGGCG 1315 | || | ||||||||||||| ||| |||| |||||||||| ||||| ||||| ||||| Sbjct 672 -GTTTCTATCAGCTTATCAGACGAAGGGTT-TGGATGCTCCTCATGTTTATGCAGTGGCA 729 Query 1316 GATGCAGCTTATGATGAGATGATGAGAG 1343 |||||||||||||||||||||||||||| Sbjct 730 GATGCAGCTTATGATGAGATGATGAGAG 757 > Ahg495512 jgi|Araly1|495512|fgenesh2_kg.8__1328__AT5G54270.1 Length=1133 Score = 307 bits (166), Expect = 4e-82 Identities = 175/179 (98%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 4164 CCACTTAGCTTTGTATTAGTATCACGATCCCAAAATGTTAGATTAAGAGCATTGTAGATT 4223 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 1133 CCACTTAGCTTTGTATTAGTATCCCGATCCCAAAATGTTAGATTGAGAGCATTGTAGATT 1074 Query 4224 TAGCTGTGAGAGACATGTATTTTTGAGACTTCTTCTGTGCATAGCAAATAGAAGATTTGT 4283 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1073 TAGCTGTGAGAGACATGTATTTTTGAGACTTCTTCTGTGTATAGCAAATAG-AGATTTGT 1015 Query 4284 AATTTGAGAGGAACAAGAAAGGTTATGTTCATATCATTACAAGAATCACATCAAGACTT 4342 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1014 AATTTGAGAGGAACAAGAAAGGTTATGTTCATATCATTACAAGAATCACATCAAGACTT 956 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 164256485068 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5