BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT5G59160.1

Length=1468
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg917653 jgi|Araly1|917653|Al_scaffold_0008_2404                   1568    0.0   
  Ahg897508 jgi|Araly1|897508|Al_scaffold_0005_1474                   1092    0.0   
  Ahg887874 jgi|Araly1|887874|Al_scaffold_0048_7                      1029    0.0   
  Ahg481858 jgi|Araly1|481858|fgenesh2_kg.4__918__AT2G29400.1          560    9e-159


> Ahg917653 jgi|Araly1|917653|Al_scaffold_0008_2404
Length=939

 Score = 1568 bits (849),  Expect = 0.0
 Identities = 909/939 (97%), Gaps = 0/939 (0%)
 Strand=Plus/Plus

Query  219   ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCCGCTCTCGATGATATCATTCGTCGT  278
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  1     ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCCGTTCTCGATGATATCATTCGTCGT  60

Query  279   TTGTTGGATTACAGAAACCCTAAGCCTGGTACCAAACAGGCTATGCTCAACGAGTCTGAG  338
             |||||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||
Sbjct  61    TTGTTGGATTACAGAAACCCTAAGCCTGGTACGAAGCAGGTTATGCTCACCGAGTCTGAG  120

Query  339   ATCCGTCAGCTTTGCATCGTCTCTAGAGAGATTTTTCTTCAACAGCCTAACCTTCTTGAG  398
             ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct  121   ATCCGACAGCTTTGCATCGTCTCTAGAGAGATTTTCCTTCAACAGCCTAACCTCCTTGAG  180

Query  399   CTCGAAGCTCCTATCAAGATCTGCGGTGATATTCATGGACAATACTCAGATCTATTGAGG  458
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  181   CTCGAAGCTCCTATCAAGATCTGCGGTGATATTCATGGACAATACTCTGATCTATTGAGG  240

Query  459   CTGTTTGAGTATGGAGGCTTCCCACCTACAGCTAACTATTTATTCTTAGGAGATTACGTA  518
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  241   CTGTTTGAGTATGGAGGCTTCCCACCTACAGCTAACTATTTATTCTTAGGAGATTACGTG  300

Query  519   GACAGGGGCAAGCAGAGTTTGGAGACTATTTGTCTTCTGCTTGCTTACAAAATCAAATAC  578
             ||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  301   GACCGCGGCAAGCAGAGTTTGGAGACTATTTGTCTTCTGCTTGCCTACAAAATCAAATAC  360

Query  579   CCTGAGAACTTTTTTCTTCTAAGAGGAAACCACGAATGTGCTTCTATTAACAGAATCTAT  638
             || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  361   CCCGAGAACTTTTTTCTTCTTAGAGGAAACCACGAATGTGCTTCTATTAACAGAATCTAT  420

Query  639   GGATTCTATGATGAATGTAAACGTCGATTCAGTGTGAGACTCTGGAAAGTGTTTACAGAT  698
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421   GGATTCTATGATGAATGTAAACGTCGATTCAGTGTGAGACTCTGGAAAGTGTTTACAGAT  480

Query  699   TCTTTTAACTGTCTCCCTGTTGCTGCTGTTATAGACGATAAGATATTATGTATGCACGGT  758
             ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct  481   TCTTTTAACTGTCTCCCCGTCGCTGCTGTTATAGACGATAAGATATTATGTATGCACGGT  540

Query  759   GGCCTTTCTCCCGATTTGACCAACGTGGAACAGATTAAGAACATTAAGCGACCTACTGAT  818
             || |||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||
Sbjct  541   GGGCTTTCTCCCGATTTGACCAATGTGGAAGAGATTAAGAACATTAAGCGACCTACCGAT  600

Query  819   GTTCCTGACTCTGGTTTGCTCTGTGATCTGCTTTGGTCTGATCCAAGCAAAGATGTCAAA  878
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  601   GTTCCAGACTCTGGTTTGCTCTGTGATCTGCTTTGGTCTGATCCAAGCAAAGATGTCAAA  660

Query  879   GGTTGGGGGATGAATGACCGTGGAGTCTCTTACACGTTTGGCCCTGACAAAGTCGCGGAG  938
             ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || 
Sbjct  661   GGTTGGGGGATGAATGATCGTGGAGTCTCTTACACGTTTGGGCCTGACAAAGTCGCCGAA  720

Query  939   TTTCTAATAAAGAATGATATGGATCTCATCTGCCGTGCCCACCAGGTTGTAGAGGATGGA  998
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct  721   TTTCTAATAAAGAATGATATGGACCTCATCTGCCGTGCCCACCAGGTTGTAGAGGATGGG  780

Query  999   TATGAGTTTTTCGCCGATAGACAGCTTGTTACGATATTTTCTGCTCCCAACTACTGTGGT  1058
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  781   TATGAGTTTTTCGCCGATAGACAGCTTGTTACGATATTTTCTGCTCCCAACTACTGCGGT  840

Query  1059  GAATTTGACAATGCTGGTGCTATGATGAGTGTTGATGAAAGTTTAATGTGCTCTTTCCAA  1118
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  841   GAATTTGACAATGCTGGTGCTATGATGAGTGTTGATGAAAGTTTAATGTGCTCTTTCCAA  900

Query  1119  ATTCTTAAGCCTGCTGATCGAAAGCCCCGGTTCTTATGA  1157
             |||||||||||||||||||||| ||||||||||||||||
Sbjct  901   ATTCTTAAGCCTGCTGATCGAAGGCCCCGGTTCTTATGA  939


> Ahg897508 jgi|Araly1|897508|Al_scaffold_0005_1474
Length=939

 Score = 1092 bits (591),  Expect = 0.0
 Identities = 834/950 (88%), Gaps = 22/950 (2%)
 Strand=Plus/Plus

Query  219   ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCCGCTCTCGATGATATCATTCGTCGT  278
             ||||||||||||||||||||||||||||||||||| | |||||| || |||||||| |||
Sbjct  1     ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCTGTTCTCGACGACATCATTCGACGT  60

Query  279   TT-GTTGGATTACAGAAACCCT-AAGCCTGGTACCAAACAGGCTATGCTCAACGAGTCTG  336
             ||  || ||||||||||||||| ||| |||| |||||||| |||||||||||||| ||||
Sbjct  61    TTACTT-GATTACAGAAACCCTAAAG-CTGGGACCAAACAAGCTATGCTCAACGATTCTG  118

Query  337   AGATCCGTCAGCTTTGCATCGTCTCTAGAGAGATTTTTCTTCAACAGCCTAACCTTCTTG  396
             ||||||| ||||||||  | ||||| |||||||| |||||||||||||||   |||||||
Sbjct  119   AGATCCGACAGCTTTGTTTTGTCTCCAGAGAGATATTTCTTCAACAGCCTTGTCTTCTTG  178

Query  397   AGCTCGAAGCTCCTATCAAGATCTGCGGTGATATTCATGGACAATACTCAGATCTATTGA  456
             ||||||  || ||| | |||||||| ||||||||||| || |||||||||||| ||||||
Sbjct  179   AGCTCGCTGCCCCTGTTAAGATCTGTGGTGATATTCACGGTCAATACTCAGATTTATTGA  238

Query  457   GGCTGTTT-GAGTATGGAGGCTTCCCACCTACAGCTAACTATTTATTCTTAGGAGATTAC  515
             |||| ||| ||||||||||| ||||| ||| |||| ||||| ||||||||||||||||||
Sbjct  239   GGCT-TTTCGAGTATGGAGGTTTCCCTCCTGCAGCAAACTACTTATTCTTAGGAGATTAC  297

Query  516   GTAGACAG-GGGCAAGCAGAGTTTGGAGACTATTTGTCTTCTGCTTGCTTACAAAATCAA  574
             || ||| | ||| ||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct  298   GTTGACCGTGGG-AAGCAGAGTATGGAGACTATTTGTCTTCTGCTTGCTTACAAGATCAA  356

Query  575   ATACCCTGAGAACTTTTTTCTTCTAAGAGGAAACCACGAATGTGCTTCTATTAACAGAAT  634
             |||||| || |||||||||||| ||||||||||||| || ||||| ||||||||||||||
Sbjct  357   ATACCCCGAAAACTTTTTTCTTTTAAGAGGAAACCATGAGTGTGCATCTATTAACAGAAT  416

Query  635   CTATGGATTCTATGATGAATGTAAACGTCGATTCAGTGTG-AGACTCTGGAAAGTGTTTA  693
             ||| ||||||||||| |||||||||||  | |||| |||| || ||||||||||| ||||
Sbjct  417   CTACGGATTCTATGACGAATGTAAACGAAGGTTCAATGTGAAG-CTCTGGAAAGTATTTA  475

Query  694   CAGATTCTTTTAACTGTCTCCCTGTTGCTGCTGTTATAGACGATAAGAT-ATTATGTATG  752
             ||||  ||||||||||||||||||| |||||||| |||||||| |||||  || ||||||
Sbjct  476   CAGACACTTTTAACTGTCTCCCTGTGGCTGCTGTCATAGACGAAAAGATCCTT-TGTATG  534

Query  753   CACGGTGGCCTTTCTCCCGATTTGACCAACGTGGAACAGATTAAGAACATTA-AGCGACC  811
             |||||||| || ||||||||||||| ||| ||||||||||||||||||| || |||| ||
Sbjct  535   CACGGTGGACTATCTCCCGATTTGATCAATGTGGAACAGATTAAGAACA-TAGAGCGTCC  593

Query  812   TACTGATGTTCCTGACTCTGGTTTGCTCTGTGATCTGCTTTGGTCTGATCCAAGCAAAGA  871
              | ||||||||| |||||||||||||||||||| || |||||||||||||| || |||||
Sbjct  594   AATTGATGTTCCAGACTCTGGTTTGCTCTGTGACCTTCTTTGGTCTGATCCTAGTAAAGA  653

Query  872   TGTCAAAGGTTGGGGGATGAATGACCGTGGAGTCTCTTACACGTTTGGCCCTGACAAAGT  931
               ||||||| |||||||||||||| ||||| ||||||||||| |||||| ||||||||||
Sbjct  654   CATCAAAGGCTGGGGGATGAATGATCGTGGTGTCTCTTACACTTTTGGCGCTGACAAAGT  713

Query  932   CGCGGAGTTTCTAATAAAGAATGATATGGATCTCA-TCTGCCGTGCCCACCAGGTTGTAG  990
              || |||||||||||||| |||||||||||| | | |||| ||||||||||||||||| |
Sbjct  714   TGCTGAGTTTCTAATAAAAAATGATATGGAT-TTAGTCTGTCGTGCCCACCAGGTTGTGG  772

Query  991   AGGATGGATATGAGTT-TTTCGCCGATAGACAGCTTGTTACGATATTTTCTGCTCCCAAC  1049
             ||||||| |||||||| ||| || |||||||||||||| || || ||||||||||| |||
Sbjct  773   AGGATGGGTATGAGTTCTTT-GCTGATAGACAGCTTGTGACTATGTTTTCTGCTCCAAAC  831

Query  1050  TACTGTGGTGAATTTGACAATGCTGGTGCTA-TGATGAGTGTTGATGAAAGTTTAATGTG  1108
             ||||||||||||||||||||||| ||||| | |||||||||| || ||||||||||||||
Sbjct  832   TACTGTGGTGAATTTGACAATGCGGGTGC-ATTGATGAGTGTGGACGAAAGTTTAATGTG  890

Query  1109  CTCTTTCCAAATTCTTAAGCCTGCTG-ATCGAAAGCCCCGGTTCTTATGA  1157
             ||||||||||||||||||||||| || |||| | | | |||||||| |||
Sbjct  891   CTCTTTCCAAATTCTTAAGCCTG-TGGATCGCAGGTCGCGGTTCTTTTGA  939


> Ahg887874 jgi|Araly1|887874|Al_scaffold_0048_7
Length=879

 Score = 1029 bits (557),  Expect = 0.0
 Identities = 596/615 (97%), Gaps = 1/615 (0%)
 Strand=Plus/Plus

Query  543   ACTATTTGTCTTCTGCTTGCTTACAAAATCAAATACCCTGAGAACTTTTTTCTTCTAAGA  602
             |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct  266   ACTATTTGTCTTCTGCTTGC-TACAAAATCAAATACCCCGAGAACTTTTTTCTTCTTAGA  324

Query  603   GGAAACCACGAATGTGCTTCTATTAACAGAATCTATGGATTCTATGATGAATGTAAACGT  662
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  325   GGAAACCACGAATGTGCTTCTATTAACAGAATCTATGGATTCTATGATGAATGTAAACGT  384

Query  663   CGATTCAGTGTGAGACTCTGGAAAGTGTTTACAGATTCTTTTAACTGTCTCCCTGTTGCT  722
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct  385   CGATTCAGTGTGAGACTCTGGAAAGTGTTTACAGATTCTTTTAACTGTCTCCCCGTCGCT  444

Query  723   GCTGTTATAGACGATAAGATATTATGTATGCACGGTGGCCTTTCTCCCGATTTGACCAAC  782
             ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct  445   GCTGTTATAGATGATAAGATATTATGTATGCACGGTGGGCTTTCTCCCGATTTGACCAAT  504

Query  783   GTGGAACAGATTAAGAACATTAAGCGACCTACTGATGTTCCTGACTCTGGTTTGCTCTGT  842
             |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct  505   GTGGAAGAGATTAAGAACATTAAGCGACCTACCGATGTTCCAGACTCTGGTTTGCTCTGT  564

Query  843   GATCTGCTTTGGTCTGATCCAAGCAAAGATGTCAAAGGTTGGGGGATGAATGACCGTGGA  902
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  565   GATCTGCTTTGGTCTGATCCAAGCAAAGATGTCAAAGGTTGGGGGATGAATGATCGTGGA  624

Query  903   GTCTCTTACACGTTTGGCCCTGACAAAGTCGCGGAGTTTCTAATAAAGAATGATATGGAT  962
             ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| 
Sbjct  625   GTCTCTTACACGTTTGGGCCTGACAAAGTCGCCGAATTTCTAATAAAGAATGATATGGAC  684

Query  963   CTCATCTGCCGTGCCCACCAGGTTGTAGAGGATGGATATGAGTTTTTCGCCGATAGACAG  1022
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  685   CTCATCTGCCGTGCCCACCAGGTTGTAGAGGATGGGTATGAGTTTTTCGCCGATAGACAG  744

Query  1023  CTTGTTACGATATTTTCTGCTCCCAACTACTGTGGTGAATTTGACAATGCTGGTGCTATG  1082
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  745   CTTGTTACGATATTTTCTGCTCCCAACTACTGCGGTGAATTTGACAATGCTGGTGCTATG  804

Query  1083  ATGAGTGTTGATGAAAGTTTAATGTGCTCTTTCCAAATTCTTAAGCCTGCTGATCGAAAG  1142
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  805   ATGAGTGTTGATGAAAGTTTAATGTGCTCTTTCCAAATTCTTAAGCCTGCTGATCGAAGG  864

Query  1143  CCCCGGTTCTTATGA  1157
             |||||||||||||||
Sbjct  865   CCCCGGTTCTTATGA  879


 Score =  337 bits (182),  Expect = 2e-91
 Identities = 198/206 (96%), Gaps = 0/206 (0%)
 Strand=Plus/Plus

Query  219  ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCCGCTCTCGATGATATCATTCGTCGT  278
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  1    ATGGCGCAACAAGGGCAGGGAAGCATGGACCCTGCCGTTCTCGATGATATCATTCGTCGT  60

Query  279  TTGTTGGATTACAGAAACCCTAAGCCTGGTACCAAACAGGCTATGCTCAACGAGTCTGAG  338
            |||||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||
Sbjct  61   TTGTTGGATTACAGAAACCCTAAGCCTGGTACGAAGCAGGTTATGCTCACCGAGTCTGAG  120

Query  339  ATCCGTCAGCTTTGCATCGTCTCTAGAGAGATTTTTCTTCAACAGCCTAACCTTCTTGAG  398
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct  121  ATCCGACAGCTTTGCATCGTCTCTAGAGAGATTTTCCTTCAACAGCCTAACCTCCTTGAG  180

Query  399  CTCGAAGCTCCTATCAAGATCTGCGG  424
            ||||||||||||||||||||||||||
Sbjct  181  CTCGAAGCTCCTATCAAGATCTGCGG  206


> Ahg481858 jgi|Araly1|481858|fgenesh2_kg.4__918__AT2G29400.1
Length=1349

 Score =  560 bits (303),  Expect = 9e-159
 Identities = 646/808 (80%), Gaps = 38/808 (5%)
 Strand=Plus/Plus

Query  335   TGAGATCCGTCAGC-TT-TGCATCGTCTCTAGAGAGATTTTTCTTCAACAGCCTAACCTT  392
             ||| || ||||||| || ||| | ||||| | ||| || ||||||||||| || || || 
Sbjct  246   TGAAATTCGTCAGCTTTGTGC-T-GTCTCCAAAGAAATCTTTCTTCAACAACCCAATCTG  303

Query  393   CTTGAGCTCGAAGCTCCTATCAAGATCTGCGGTGATATTCATGGACAATACTCAGATCTA  452
             |||||  | |||||||| |||||||||||||||||||||||||| || || |||||||||
Sbjct  304   CTTGAATTGGAAGCTCCCATCAAGATCTGCGGTGATATTCATGGGCAGTATTCAGATCTA  363

Query  453   TTGAGGCTGTTTGAGTATGGAGGCTTCCCACCT-ACAGCTAACTATTTATTCTTAGGAGA  511
             |||||||||||||||||||||||||| || ||  | ||| || ||||| |||||||| ||
Sbjct  364   TTGAGGCTGTTTGAGTATGGAGGCTTTCCTCCCGA-AGCCAATTATTTGTTCTTAGGTGA  422

Query  512   TTACGTAGACAGGGGCAAGCAGAGTTTGGAGACTATTTGTCTTCTGCTTGCTTACAAAAT  571
              || || ||| | |||||||| || ||||| || || || ||||| || |||||||||||
Sbjct  423   CTATGTTGACCGTGGCAAGCAAAGCTTGGAAACAATATGCCTTCTCCTAGCTTACAAAAT  482

Query  572   CAAATACCCTGAGAACTTTTTTCTT-CTAAGAGGAAACCACGAATGTGCTTCTATTAA-C  629
             ||| |||||||||||||| || ||| || ||||| || || |||| ||| || ||||| |
Sbjct  483   CAAGTACCCTGAGAACTTCTT-CTTGCTGAGAGGGAATCATGAATCTGCCTCCATTAATC  541

Query  630   AGAATCTATGGATTCTATGATGAATGTAAACGTC-GATTCAGTGTGAGACTCTGGAAAGT  688
              | || || || |||||||| || || ||||| | | |||| ||| |||||||||||| |
Sbjct  542   -GTATTTACGGTTTCTATGACGAGTGCAAACG-CAGGTTCAATGTCAGACTCTGGAAAAT  599

Query  689   GTTTACAGATT-CTTTTAACTGTCTCCCTGTTGCTGCTGTTA-TAGACGATAAGA-TATT  745
              || || |||| |||| |||||||| ||||| || ||  ||| | || || | || || |
Sbjct  600   ATTCACTGATTGCTTT-AACTGTCTTCCTGTGGCCGCC-TTAATTGATGACA-GAATACT  656

Query  746   ATGTATGCACGGTGGCCTTTCTCCC-GATTTGACCAACGT--GGAACAGATTAAGAAC-A  801
             ||||||||| |||||  |||| ||| || ||||| || ||  ||| ||||||| |||  |
Sbjct  657   ATGTATGCATGGTGGGATTTC-CCCAGAGTTGAC-AA-GTTTGGACCAGATTA-GAAATA  712

Query  802   TTA-AGCGACCTACTG-ATGTTCCTGACTCTGGTTTGCTCTGTGATCTGCTTTGGTCTGA  859
             ||  | || || | || || |||| |||||||||||| | |||||| | || ||||| ||
Sbjct  713   TTGCA-CGTCCAA-TGGATATTCCAGACTCTGGTTTGGTATGTGATTTACTGTGGTCGGA  770

Query  860   TCCAAGCAAAGATGTCAAAGGTTGGGGGATGAATGACCGTGGAGTCTCTTACACGTTTGG  919
             ||| ||   ||| |||||||| ||||| ||||| || || || || || ||||| |||||
Sbjct  771   TCCTAGTGGAGACGTCAAAGGCTGGGGCATGAACGATCGCGGTGTTTCATACACTTTTGG  830

Query  920   CCCTGACAAAGTCGCGGAGTTTCT--AATAAAGAATGATATGGATCTCATCTGCCGTGCC  977
               ||||||||||||| |||||| |  || ||| ||||| ||||| || ||||| ||||||
Sbjct  831   AGCTGACAAAGTCGCAGAGTTTTTGGAA-AAA-AATGACATGGACCTTATCTGTCGTGCC  888

Query  978   CACCAGGTTGTAGAGGATGGATATGAGTT-TTTCGCCGATAGACAGCTTGTTAC-GATAT  1035
             ||||||||||| || ||||| |||||||| ||| || || |||||||||||||| | |||
Sbjct  889   CACCAGGTTGTTGAAGATGGGTATGAGTTCTTT-GCAGACAGACAGCTTGTTACAG-TAT  946

Query  1036  TTTCTGCTCCCAACTACTGTGGTGAATTTGACAATGCTGGTGCTATGATGAGTGTTGATG  1095
             |||| ||||||||||| || || ||||||||||| ||||| || ||||||||  ||||||
Sbjct  947   TTTCAGCTCCCAACTATTGCGGGGAATTTGACAACGCTGGCGCAATGATGAGCATTGATG  1006

Query  1096  AAAGTTTAATGTGCTCTTTCCAAATTCT  1123
             | || ||||||||||| |||||||||||
Sbjct  1007  AGAGCTTAATGTGCTCATTCCAAATTCT  1034



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 54926133290


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5