BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60410.2 Length=3219 Score E Sequences producing significant alignments: (Bits) Value Ahg496189 jgi|Araly1|496189|fgenesh2_kg.8__2005__AT5G60410.5 4630 0.0 Ahg897324 jgi|Araly1|897324|Al_scaffold_0005_1290 2222 0.0 > Ahg496189 jgi|Araly1|496189|fgenesh2_kg.8__2005__AT5G60410.5 Length=3085 Score = 4630 bits (2507), Expect = 0.0 Identities = 2715/2817 (96%), Gaps = 8/2817 (0%) Strand=Plus/Plus Query 127 ATCAAGTATCCGATTTCATGATCGGTTGCTG--TATGGAGACTAATTGCTGGAGTTTAGG 184 ||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 53 ATC-AGTTTCCGATTTCATGATCGGGTGCTGTATATGGAGACTAATTGCTGGAGTTTAGG 111 Query 185 TTCGTGTGTTTTGAACTGAGCTTTTGGTTCTTGTTTGTGTCTGGTGTTGAAGACATGGAT 244 ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct 112 TTCGTGTGTTTTGAACTGAGCTTTTGGTTCTTG-TT-TGTCTGCTGTTGAAGACATGGAT 169 Query 245 TTGGAAGCTAATTGTAAGGAAAAACTTTCATATTTTCGGATAAAAGAGCTCAAGGATGTG 304 |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 170 TTGGAAGCTACTTGTAAGGATAAACTTTCATATTTTCGAATAAAAGAGCTCAAGGATGTG 229 Query 305 CTCACTCAGCTGGGACTTTCGAAACAGGGAAAGAAGCAGGAACTTGTCGACCGGATCTTG 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 230 CTCACTCAGCTGGGACTTTCGAAACAGGGAAAGAAGCAGGAACTTGTCGACCGGATCTTA 289 Query 365 ACCCTTCTTTCTGATGAACAAGCTGCCAGGTTGTTGTCTAAAAAGAATACAGTGGCAAAG 424 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 290 ACCCTTCTTTCTGATGAACAAGCTGCCAGGGTGTGGTCTAAAAAGAATACAGTGGCAAAG 349 Query 425 GAAGCAGTTGCCAAATTAGTGGACGATACATATAGGAAAATGCAAGTATCTGGGGCAAGT 484 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 350 GAAGAAGTTGCAAAATTAGTGGACGATACATATAGGAAAATGCAAGTATCTGGGGCAAGT 409 Query 485 GATTTAGCATCAAAAGGACAAGTGAGTTCAGATACCAGTAATCTGAAAGTTAAGGGAGAG 544 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 410 GATTTAGCATCAAAAGGACAAGTAAGTTCAGATACCAGTAATCTGAAAGTTAAGGGAGAG 469 Query 545 CCTGAAGACCCCTTCCAACCAGAAATTAAAGTTCGATGTGTTTGTGGAAACTCGCTAGAA 604 |||||||| ||||| |||||||||||||||||||||||||||||||| || || |||||| Sbjct 470 CCTGAAGATCCCTTTCAACCAGAAATTAAAGTTCGATGTGTTTGTGGGAATTCACTAGAA 529 Query 605 ACAGACTCAATGATACAGTGTGAGGATCCAAGATGCCATGTTTGGCAGCATGTTGGCTGT 664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 530 ACAGACTCAATGATACAGTGTGAGGATCCAAGATGCCATGTTTGGCAGCATGTTGGCTGT 589 Query 665 GTTATTCTCCCAGATAAGCCTATGGATGGGAATCCACCACTTCCGGAATCATTTTATTGT 724 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 590 GTTATTCTCCCAGATAAGCCAATGGATGGGAATCCACCACTTCCAGAATCATTTTATTGT 649 Query 725 GAAATCTGCCGACTTACTCGAGCTGACCCATTTTGGGTTACAGTGGCACATCCACTCTCT 784 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 650 GAAATCTGCCGACTTACTCGAGCTGACCCGTTTTGGGTTACAGTGGCACATCCACTCTCT 709 Query 785 CCAGTGAGGCTGACTGCAACGACTATCCCAAATGATGGTGCAAGCACAATGCAGAGTGTG 844 ||||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| Sbjct 710 CCAGTGAGGCTGACTGCGACGACTATCCCAAATGATGGTACAAACACAATGCTGAGTGTG 769 Query 845 GAGAGAACATTTCAAATCACAAGGGCAGACAAGGACCTTTTGGCCAAACCAGAGTACGAT 904 ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| Sbjct 770 GAGAGAACATTTCAAATTACAAGGGCAGACAAGGACCTGCTGGCCAAACAAGAGTACGAT 829 Query 905 GTTCAGGCTTGGTGTATGCTCTTGAATGATAAAGTTCTCTTTAGGATGCAGTGGCCTCAG 964 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 830 GTTCAGGCTTGGTGTATGCTCTTGAATGACAAAGTTCTCTTTAGGATGCAGTGGCCTCAG 889 Query 965 TATGCTGATCTGCAGGTCAATGGTGTGCCTGTACGTGCAATTAATCGACCTGGAGGACAG 1024 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 890 TATGCTGATCTGCAGGTCAATGGTTTGCCTGTACGTGCAATTAATCGACCTGGATCACAG 949 Query 1025 CTTTTGGGAGTCAACGGCCGCGACGATGGACCCATTATTACATCTTGTATTAGGGATGGA 1084 |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| Sbjct 950 CTTTTGGGAGTCAACGGCCGCGACGATGGACCTATTATCACACCTTGTATTAGGGATGGA 1009 Query 1085 GTTAACAGAATATCCTTGAGTGGAGGTGACGTTCGGATTTTTTGTTTTGGGGTCAGACTT 1144 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1010 GTTAACAGAATATCCTTGAGTGGAGGTGACGTTCGGATTTTTTGTTTTGGAGTTAGACTT 1069 Query 1145 GTGAAGCGCAGGACTCTACAACAGGTTCTAAATTTGATTCCAGAAGAGGGTAAAGGGGAG 1204 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1070 GTGAAGCGCAGGACTCTACAACAGGTTCTAAATTTGATTCCAGAAGAAGGTAAAGGGGAG 1129 Query 1205 ACTTTTGAAGATGCTCTTGCACGTGTCCGCCGATGCATTGGAGGTGGAGGTGGAGATGAT 1264 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1130 ACTTTTGAAGATGCTCTTGCACGAGTCCGCCGATGCATTGGAGGTGGAGGTGGAGATGAT 1189 Query 1265 AATGCCGACAGTGATAGTGACATTGAAGTTGTTGCTGATTTCTTCGGTGTCAATCTTCGG 1324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1190 AATGCCGACAGTGATAGTGACATTGAAGTTGTTGCTGATTTCTTCGGTGTCAATCTTCGG 1249 Query 1325 TGTCCTATGAGCGGTTCTAGGATAAAAGTTGCTGGGAGATTTTTACCCTGTGTGCACATG 1384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1250 TGTCCTATGAGCGGTTCTAGGATAAAAGTTGCTGGGAGATTTTTACCCTGTGTGCACATG 1309 Query 1385 GGCTGTTTTGACCTTGATGTGTTTGTGGAGTTGAATCAACGTTCCAGAAAGTGGCAGTGC 1444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1310 GGCTGTTTTGACCTTGATGTGTTTGTGGAGTTGAATCAACGTTCCAGAAAGTGGCAGTGC 1369 Query 1445 CCTATTTGTCTGAAGAACTACTCAGTGGAGCATGTAATCGTCGATCCTTATTTTAACCGT 1504 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1370 CCTATTTGTCTGAAGAACTACTCAGTGGAGCATGTAATTGTCGATCCTTATTTTAACCGT 1429 Query 1505 ATCACGTCTAAGATGAAGCATTGTGATGAAGAGGTGACTGAAATTGAAGTGAAACCTGAT 1564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1430 ATCACGTCTAAGATGAAGCATTGTGATGAAGAGGTGACTGAAATTGAAGTGAAACCTGAT 1489 Query 1565 GGTTCTTGGCGTGTAAAGTTCAAAAGAGAGAGTGAGCGAAGGGAACTGGGGGAACTCTCA 1624 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1490 GGTTCTTGGCGTGTAAAGTCCAAAAGAGAGAGTGAGCGAAGGGAACTGGGGGAACTCTCA 1549 Query 1625 CAGTGGCATGCACCTGATGGTAGCCTTTGCCCCTCTGCTGTTGATATTAAACGGAAGATG 1684 |||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 1550 CAGTGGCACGCACCAGATGGTAGTCTTTACCCCTCTGCTGTTGATATTAAACGGAAGATG 1609 Query 1685 GAAATGTTACCGGTTAAGCAAGAAGGTTACTCAGATGGTCCAGCCCCGCTAAAACTTGGA 1744 |||||||||||||||||||||||||||| ||||||||| || || || |||||||||||| Sbjct 1610 GAAATGTTACCGGTTAAGCAAGAAGGTTTCTCAGATGGCCCGGCGCCTCTAAAACTTGGA 1669 Query 1745 ATAAGGAAGAATCGTAATGGCATTTGGGAAGTTAGCAAACCTAATACAAATGGATTATCT 1804 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1670 ATAAGGAAAAATCGTAATGGCATTTGGGAAGTTAGCAAACCTAATACAAATGGATTATCT 1729 Query 1805 TCCAGTAATAGGCAAGAAAAGGTTGGGTATCAGGAGAAGAATATTATACCAATGAGTAGT 1864 |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 1730 TCCAATAATAGGCAAGAAAAGGTTGGGTATCAGGAGAAAAATGTTATACCAATGAGTAGT 1789 Query 1865 AGTGCTACTGGAAGTGGTAGGGATGGTGATGATGCAAGCGTAAACCAGGATGCTATTGGA 1924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1790 AGTGCTACTGGAAGTGGTAGGGATGGTGATGATGCAAGCGTAAACCAGGATGCTATTGGA 1849 Query 1925 ACTTTTGACTTTGTAGCCAACGGCATGGAACTTGATTCCATTTCCATGAATGTTGATTCA 1984 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1850 ACTTTTGACTTTGTAGCCAACGGCATGGAACTTGATTCCATTTCCATGAATGTTGATTCA 1909 Query 1985 GGTTATAACTTTCCTGACAGAAACCAATCTGGCGAGGGTGGAAATAATGAAGTCATCGTT 2044 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1910 GGTTATAACTTTCCTGACAGAAACCAATCTGGAGAGGGTGGAAATAATGATGTCATCGTT 1969 Query 2045 CTGAGTGATTCTGATGACGAGAATGATTTAGTGATCACTCCAGGGCCTGCATACAGTGGT 2104 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 1970 CTGAGTGATTCTGATGACGAGAATGATGTAGTAATCACTCCAGGGCCTGCATACAGTGGT 2029 Query 2105 TGTCAAACAGATGGTGGACTTACTTTTCCACTGAACCCTCCTGGAATAATTAACTCATAT 2164 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 2030 TGTCAAACAGATGGTGGGCTTACTTTTCCACTGAACCCTTCTGGAATAATTAACTCATAT 2089 Query 2165 AATGAGGACCCACACAGCATAGCTGGGGGAAGTTCAGGCTTAGGTCTTTTCAATGATGAT 2224 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2090 AATGAGGACCCACACAACATAGCTGGGGGAAGTTCACGCTTAGGTCTTTTCAATGATGAT 2149 Query 2225 GATGAATTTGATACGCCCCTTTGGTCATTTCCTTCTGAAACTCCAGAAGCCCCTGGGTTC 2284 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2150 GACGAATTTGATACGCCCCTTTGGTCATTTCCTTCTGAAACTCCAGAAGCCCCTGGGTTC 2209 Query 2285 CAACTATTTAGATCTGATGCTGACGTTTCAGGAGGTTTAGTTGGTTTGCATCATCATAGT 2344 || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct 2210 CAGCTATTTAGATCTGATGCTGACGTTTCAGAAGGTTTAGTTGGTTTGCATAATCATGGT 2269 Query 2345 CCACTAAACTGTTCTCCTGAAATAAATGGAGGTTATACCATGGCTCCTGAGACATCAATG 2404 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2270 CCACTAAACTGTGCTCCTGAAATAAATGGAGGTTACACCATGGCTCCTGAGACATCAATG 2329 Query 2405 GCATCTGTTCCTGTGGTTCCTGGCTCTACTGGCCGATCTGAAGCAAACGATGGCCTAGTT 2464 |||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 2330 GCATCTATTCCTGTGGTTCCTGGCTCGGCTGGACGATCTGAAGCAAACGATGGCCTAGTT 2389 Query 2465 GACAATCCTCTTGCATTTGGTAGAGACGATCCCTCACTTCAAATATTTTTGCCAACAAAA 2524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2390 GACAATCCTCTTGCATTTGGTAGAGACGATCCCTCACTTCAAATATTTTTGCCAACAAAA 2449 Query 2525 CCAGATGCTTCAGCTCAGTCGGGTTTTAAAAACCAAGCTGATATGTCAAATGGTCTCCGT 2584 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2450 CCAGATGCTTCAGCTCAGTCGGGTTTTAAAAACCAAGCTGATATGTCAAATGGTATCCGC 2509 Query 2585 AGTGAAGACTGGATCTCGCTTAGGCTAGGCGATAGCGCCTCTGGGAATCATGGAGATCCT 2644 ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||| Sbjct 2510 AGTGAAGACTGGATCTCGCTTAGGCTAGGTGATAGCGCTTCTGGGAATCATCGAGTTCCT 2569 Query 2645 GCAACTACAAACGGGATTAACTCAAGCCATCAGATGTCTACGAGGGAAGGTTCTATGGAT 2704 |||||| |||||||| ||||||||||||| ||||||||| | |||||||||||| ||||| Sbjct 2570 GCAACTGCAAACGGGGTTAACTCAAGCCAGCAGATGTCTCCAAGGGAAGGTTCTTTGGAT 2629 Query 2705 ACTACAACAGAGACTGCGTCGTTGCTTCTGGGTATGAATGACAGTAGACAAGACAAGGCA 2764 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2630 ACTACAACAGACACTGCGTCGTTGCTTCTGGGTATGAATGACAGTAGGCAAGACAAGGCA 2689 Query 2765 AAGAAGCAAAGATCAGATAATCCATTTTCATTTCCTCGCCAGAAGCGTTCTGTAAGACCT 2824 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2690 AAGAAGCAAAGATCAGATAATCCATTTTCATTTCCTCGGCAGAAGCGTTCTGTAAGACCT 2749 Query 2825 CGGATGTACCTCTCCATTGACTCGGATTCTGAAACAATGAACAGGATCATCAGACAAGAC 2884 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2750 CGGATGTTCCTCTCCATTGACTCGGATTCTGAAACAATGAACGGGATCATCAGACAAGAC 2809 Query 2885 ACCGGAGTTTAAACAAGATTTGCATAATTCTCT--GTGCAGGCAAGAATTGAACCGG 2939 ||||||| ||| |||||||||| | ||||||| |||||||||||||||||||||| Sbjct 2810 ACCGGAGGTTAC-CAAGATTTGCTTGATTCTCTCTGTGCAGGCAAGAATTGAACCGG 2865 Score = 252 bits (136), Expect = 1e-65 Identities = 187/209 (89%), Gaps = 13/209 (6%) Strand=Plus/Plus Query 3022 GGATGTAATTT-GC-AAAGCGAA-GCACTGGCTGATTTAGTTTCTCTGATAGAAAAGAAA 3078 ||||||| ||| || ||||| || |||||||||||||||||| ||||||||| | |||| Sbjct 2864 GGATGTAGTTTGGCAAAAGC-AATGCACTGGCTGATTTAGTTACTCTGATAGGCAGGAAA 2922 Query 3079 AGTGGGCACAGT-GGTTCC-G---ATTTAATTAGTAGTTTGTATACTCGAAATAGGtttt 3133 |||||||||||| |||||| | | |||||||||| |||||||||||| |||||||||| Sbjct 2923 AGTGGGCACAGTGGGTTCCGGTTTAATTAATTAGTAATTTGTATACTCG-AATAGGTTTT 2981 Query 3134 ttttGTGTGGACGATGATAAAATTACTTCGAAGCCAGGAG---CTATAGAGAGATATAGC 3190 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2982 TTTTTTGTGGACGATGATAAAATTACTTCGAAGCCAGGAGGAGCTATAGAGAGATATAGC 3041 Query 3191 AATGTAAATTATGGGCTCCAAATTTTATT 3219 ||||||||||||||||||||| ||||||| Sbjct 3042 AATGTAAATTATGGGCTCCAATTTTTATT 3070 > Ahg897324 jgi|Araly1|897324|Al_scaffold_0005_1290 Length=2622 Score = 2222 bits (1203), Expect = 0.0 Identities = 2206/2678 (82%), Gaps = 118/2678 (4%) Strand=Plus/Plus Query 239 ATGGATTTGGAAGCTAATTGTAAGGAAAAACTTTCATATTTTCGGATAAAAGAGCTCAAG 298 |||||||||| ||| ||| ||||| |||||| | |||||||| || |||||||| ||| Sbjct 1 ATGGATTTGGTCTCTAGTTGCAAGGAGAAACTTGCGTATTTTCGAATTAAAGAGCTTAAG 60 Query 299 GATGTGCTCACTCAGCTGGGACTTTCGAAACAGGGAAAGAAGCAGGAACTTGTCGACCGG 358 |||||||| | ||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct 61 GATGTGCTTAATCAGCTGGGACTTTCTAAACAGGGAAAGAAGCAGGACCTTGTCGAGCGG 120 Query 359 ATCTTGACCCTTCTTTCTGATGAACAAGCTGCCAGGTTGTTGTCTAAAAAGAATACAGTG 418 ||||||| | ||||||||||||| || || || ||||||| |||||||||| || | ||| Sbjct 121 ATCTTGAGCATTCTTTCTGATGAGCATGCGGCTAGGTTGTGGTCTAAAAAGGATGCCGTG 180 Query 419 GCAAAGGAAGCA-GTTGCCAAATTAGTGGACGATACATATAGGAAAATGCAAGTATCTGG 477 |||| |||| | ||||| ||| ||||||| ||| |||||||||||||||||| || ||| Sbjct 181 GCAAGGGAA-AAGGTTGCAAAACTAGTGGAGGATGCATATAGGAAAATGCAAGCATGTGG 239 Query 478 GGCAAGTGATTTAGCATCAAAAGGACAAGTGAGTTCAGATACCAGTAATCTGAAAGTTAA 537 ||||||||| |||| |||||||||||||| |||||||||| ||||| | | |||||||| Sbjct 240 GGCAAGTGACGTAGCGTCAAAAGGACAAGTTAGTTCAGATATCAGTACTGTTAAAGTTAA 299 Query 538 GGGAGAGCCTGAAGACCCCTTCCAACCAGAAATTAAAGTTCGATGTGTTTGTGGAAACTC 597 |||||| | |||||| | ||| |||||||||| ||||||||| ||| ||||||||| ||| Sbjct 300 GGGAGAACTTGAAGATCACTTTCAACCAGAAACTAAAGTTCGGTGTCTTTGTGGAAGCTC 359 Query 598 GCTAGAAACAGACTCAATGATACAGTGTGAGGATCCAAGATGCCATGTTTGGCAGCATGT 657 ||||| ||||| |||||||||||||| |||||||| ||||||||||| ||| ||||||| Sbjct 360 ACTAGAGACAGAGTCAATGATACAGTGCGAGGATCCGAGATGCCATGTCTGGGAGCATGT 419 Query 658 TGGCTGTGTTATTCTCCCAGATAAGCCTATGGATGGGAATCCACCACTTCCGGAATCATT 717 ||| ||||| ||| |||| || ||||||||||| | ||||||| ||||| |||||||| Sbjct 420 TGGTTGTGTCATTTTCCCGGAGAAGCCTATGGAAGTTCATCCACCTCTTCCTGAATCATT 479 Query 718 TTATTGTGAAATCTGCCGACTTACTCGAGCTGACCCATTTTGGGTTACAGTGGCACATCC 777 ||| |||||||||||||||||||| || ||||||||||||||||| ||| |||| ||||| Sbjct 480 TTACTGTGAAATCTGCCGACTTACCCGTGCTGACCCATTTTGGGTCACAATGGCGCATCC 539 Query 778 ACTCTCTCCAGTGAGGCTGACTGCAACGACTATCCCAAATGATGGTGCAAGCACAATGCA 837 | | | ||| |||| | ||||||||||||| ||||||| ||||||| ||| | ||||||| Sbjct 540 ATTGTATCCGGTGAAGATGACTGCAACGACGATCCCAACTGATGGTTCAAACTCAATGCA 599 Query 838 GAGTGTGGAGAGAACATTTCAAATCACAAGGGCAGACAAGGACCTT-TTGGCCAAACCA- 895 ||||||||| |||||||||||||| |||||||||||||| || ||| |||| ||| || Sbjct 600 GAGTGTGGACAGAACATTTCAAATAACAAGGGCAGACAAAGA-CTTATTGGTGAAA-CAT 657 Query 896 GAGTACGATGTTCAGGCTTGGTGTATGCTCTTGAATGATAAAGTTCTCTTTAGGATGCAG 955 ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 658 GAGTACGATATTCAGGCTTGGTGTATGCTCTTGAATGACAAAGTTCTATTTAGGATGCAG 717 Query 956 TGGCCTCAGTATGCTGATCTGCAGGTCAATGGTGTGCCTGTACGTGCAATTAATCGACCT 1015 |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct 718 TGGCCTCAATATGCAGATCTGCAAGTCAATGGTGTGCCTGTTCGTGCTATTAACCGACCC 777 Query 1016 GGAGG-ACAGCTTTTGGGAGTCAACGGCCGCGACGATGGACCCATTATTACATCTTGTAT 1074 || | ||||||| |||| | ||| |||||||| |||||||| ||||||||| ||||| | Sbjct 778 GG-GTCACAGCTTCTGGGGGCCAATGGCCGCGATGATGGACCTATTATTACACCTTGTGT 836 Query 1075 TAGGGATGGAGTTAACA-GAATATCCTTGAGTGGAGGTGACGTTCGG-ATTTTTTGTTTT 1132 ||| |||||| |||||| || |||||||||||||| ||||| | | | | ||||||||| Sbjct 837 TAGAGATGGAATTAACAAGA-TATCCTTGAGTGGATGTGAC-TCCCGCAGTTTTTGTTT- 893 Query 1133 GGG-GTCAGACTTGTGAAGCG-CAGGACTCTACAACAGGTTCT-AAATTTGATTCCAGAA 1189 ||| || |||||||||||||| | ||||||| |||||||| || ||| ||||||| || Sbjct 894 GGGTGTAAGACTTGTGAAGCGAC-GGACTCTCCAACAGGT-CTTAAACATGATTCCGGAT 951 Query 1190 GAGGGTAAAGGGGAGAC-TTTTGAAGATGCTCTTGCACGTGTCCGCCGATGCATTGGAGG 1248 || | |||||| || || |||||||||||||||||| ||||| ||||||||||||||||| Sbjct 952 GAAGATAAAGGTGA-ACCTTTTGAAGATGCTCTTGCGCGTGTACGCCGATGCATTGGAGG 1010 Query 1249 TGGAGGTGGAGATGATAATGCCGACAGTGATAGTGACATTGAAGTTGTTGCTGATTTCTT 1308 || | |||| ||||| ||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct 1011 TGCAACTGGAAATGATGATGCCGACAGTGACAGTGATATTGAGGTTGTCGCAGATTTCTT 1070 Query 1309 CGGTGTCAATCTTCGGTGTCCTATGAGCGGTTCTAGGATAAAAGTTGCTGGGAGATTTTT 1368 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1071 TGGTGTCAATCTCCGGTGTCCTATGAGCGGCTCTAGGATGAAAGTTGCTGGGAGATTTAA 1130 Query 1369 ACCCTGTGTGCACATGGGCTGTTTTGACCTTGATGTGTTTGTGGAGTTGAATCAACGTTC 1428 || ||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| Sbjct 1131 ACTCTGTGTGCACATGGGATGTTTTGACCTTGAGGTGTTTGTGGAGCTGAATCAACGTTC 1190 Query 1429 CAGAAAGTGGCAGTGCCCTATTTGTCTGAAGAACTACTCAGTGGAGCATGTAATCGTCGA 1488 |||||||||||| || ||||||||||||||||||||||| |||||||| ||||| | || Sbjct 1191 CAGAAAGTGGCAATGTCCTATTTGTCTGAAGAACTACTCTCTGGAGCATATAATCATAGA 1250 Query 1489 TCCTTATTTTAACCGTATCACGTCTAAGATGA-AGCATTGTGATGAAGAGGTGACTGAAA 1547 ||||||||||||||| ||||| || ||||||| | ||||||||||||||| ||||||| | Sbjct 1251 TCCTTATTTTAACCGGATCACATCAAAGATGAGA-CATTGTGATGAAGAGTTGACTGAGA 1309 Query 1548 TTGAAGTGAAACCTGATGGTTCTTGGCGTGTAAAGTTCAAAAGAGAGAGTGAGCGAAGGG 1607 ||||| |||| |||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct 1310 TTGAAATGAAGCCTGATGGTTCTTGGCGTGTGAAGTTCAAAAGTGAAAGTGAGCGCAGGG 1369 Query 1608 AACTGGGGGAACTCTCACAGTGGCA-TGCACCTGATGGTAGCCT-TTGCCCCTCTGCTGT 1665 || |||||||||||||||| ||||| | |||||||||||| || || | || | | || Sbjct 1370 AATTGGGGGAACTCTCACAATGGCACTT-ACCTGATGGTAGTCTCTT-CTCCACAGTTGA 1427 Query 1666 TGATATTAAACGGAAGATGGAAATGTTA-C-C-GGTTAAGCAAGAAGGTTACTCAGATGG 1722 ||| ||||||| |||||||||||| || | | |||||| |||||||||| ||||||||| Sbjct 1428 TGAGATTAAACCCAAGATGGAAATGCTAACACCGGTTAAACAAGAAGGTTGCTCAGATGG 1487 Query 1723 TCCAGCCCCGCTAAAACTTGGAATAAGGAAGAATCGTAATGGCATTTGGGAAGTTAGCAA 1782 |||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1488 TCCAACCCCTTTAAAACTTGGAATAAGGAAGAATCGCAATGGTATTTGGGAAGTTAGCAA 1547 Query 1783 ACCTAATACAAATGGATTATCTTCCAGTAATAGGCAAGAAAAGGTTGGGTATCAGGAGAA 1842 |||||||| ||||| || |||||||||||||||||||| ||| ||| |||||||||| | Sbjct 1548 ACCTAATATTAATGGTTTGTCTTCCAGTAATAGGCAAGAGAAGCTTGAGTATCAGGAGCA 1607 Query 1843 GAATATTATACCAATGAGTAGTAGTGCTACTGGAAGTGGTAGGGATGGTGATGATGCAAG 1902 ||| ||||||||||||| |||||||| |||||||||||||||||||||||||| | || Sbjct 1608 TAATGTTATACCAATGAGCAGTAGTGCCACTGGAAGTGGTAGGGATGGTGATGACCCTAG 1667 Query 1903 CGTAAACCAGGATGCTATTGGAACTTTTGACTTTGTAGCCAACGGCATGGAACTTGATTC 1962 |||||||||||| ||| ||||||| ||||| |||| | ||| || ||||| |||||||| Sbjct 1668 CGTAAACCAGGACGCTGTTGGAACCTTTGATTTTGGAAACAATGGGATGGAGCTTGATTC 1727 Query 1963 -CATTTCCATGAATGTTGATTCAGGTTATAACTTTCCTGACAGAAA-C--CAATCTG--G 2016 | | ||||||||||| ||| || | || |||||| ||| || || | ||| | | | Sbjct 1728 TC-TATCCATGAATGTAGATCCAAGCTACAACTTTATTGATAGGAATCATCAACCAGCAG 1786 Query 2017 CGAGG-GTGGAAATAATGAAGTCATCGTTCTGAGTGATTCTGATGACGAGAATGAT-TTA 2074 | | | || || |||||||||||||||| | |||||||||||||| || ||| || || Sbjct 1787 CAACGAGT--AA-TAATGAAGTCATCGTTTTAAGTGATTCTGATGAAGAAAATAATGTT- 1842 Query 2075 GTGATCACTCCAGGGC-CTGCATACAGTG-GTTGTCAAACAGATGGTGGACTTACTTTTC 2132 || |||||| ||| |||| |||| || | |||||| ||||| || | | ||||| Sbjct 1843 GTAATCACTGG-GGGTTCTGCCTACAATGAGAA-TCAAACTGATGGCGGGGTAAATTTTC 1900 Query 2133 CACTGAACCCTCCTGGAATAATTAACTCATATAATGAGGACCCACACAGCATAGCTGGGG 2192 || || |||| |||| || ||||||| |||| ||| ||||| |||| | | || ||| Sbjct 1901 CATTGCACCCACCTGT--TA-TTAACTCGTATAGTGAAGACCCTCACACCGTGGCAGGGA 1957 Query 2193 G-AAGTTCAGGCTTAGGTCTTTTC---AATGAT-GATGATGAATT-TGATACGCCCCTTT 2246 || ||| ||||| ||||||||| || || || ||||| || ||||| || ||||| Sbjct 1958 ACAA-TTCGGGCTTGGGTCTTTTCGCCAAC-ATTGACGATGA-TTATGATATGCGCCTTT 2014 Query 2247 GGTCA-TTTCCTTCTGAAACTCCAGAAGC---CCCTGGGTTCCAACTATTTAG-ATCTGA 2301 || || ||| |||| || | ||| | || ||| ||||||||||||||| | |||||| Sbjct 2015 GG-CAGTTTTCTTCGGAGCC-CCA-AGGCGGACCC-GGGTTCCAACTATTT-GCATCTGA 2069 Query 2302 TGCTGACGTTTCAGGA-GGTTTAGTTGGTTTGCATCATCATAGTCCACTAAACTGTTCTC 2360 |||||| || |||| | ||||||||||| ||| | | | | ||||||| ||||| | | Sbjct 2070 TGCTGATGTATCAG-ATGGTTTAGTTGGCTTGGAGC--C-TGGTCCACTGGACTGTACCC 2125 Query 2361 CTGAAATAAATGGAGGTTATACCATGGCTCCTGAGA---CATCAATGGCATCTGTTCCTG 2417 ||| ||||| | | ||||| || || ||||| |||| |||||||| ||||||||||| Sbjct 2126 CTGCAATAAGTAGTGGTTACACAATAGCTCCAGAGATATCATCAATGCCATCTGTTCCTA 2185 Query 2418 TGGTTCCTGGCTCTACT-GGCCGAT-CT--G-A-A-GCAAACGATGGCCTAGTTGACAAT 2470 || |||| | | | | || |||| | | | | ||||||||||| |||| ||||| Sbjct 2186 TGTTTCCAGAAT-TGGTTGGACGATGCGAAGCAGATGCAAACGATGGATTAGTCAACAAT 2244 Query 2471 CCTCTTGCATTTGGTAGAGACGATCCCTCACTTCAAATATTT-TTGCCAACAAAACCAGA 2529 |||||||||||| ||||||| ||||||||||||||||||||| || ||||||| |||||| Sbjct 2245 CCTCTTGCATTTAGTAGAGAGGATCCCTCACTTCAAATATTTCTT-CCAACAAGACCAGA 2303 Query 2530 TGCTTCAGCTCAGTCGGGTTTTAAAAAC-CAAGCTGATATGTCAAATGGT-CTCCGTAGT 2587 | | ||||||||||| | ||| || || || || || ||||||| || | || |||| Sbjct 2304 TACCTCAGCTCAGTCTGATTT-AAGAAGTCAGGCCGAGGTGTCAAACGGAACCCC-TAGT 2361 Query 2588 GAAGACTGGATCTCGCTTAGGCTAGGCGAT-AGCGCCTCTGGGA-ATCA-TGGAGATCCT 2644 || || |||||||| |||||||| || ||| | || |||| | || | | | | | Sbjct 2362 GACGATTGGATCTCTCTTAGGCTTGGTGATCA-CG-----GGGAGA-CAATTG-G-TG-T 2411 Query 2645 GCAACTACAAACGGGATT-AACTCAAGCCATCAGATGTCTACGAGGGAAGGTTCTATGGA 2703 || ||| | | | | || ||| || ||| |||| || ||||| ||| || |||| Sbjct 2412 --AA--ACAGA-GTTAATGAAAACAA-CC--CAG-TGTCGACCAGGGAGGGTACTCTGGA 2462 Query 2704 TACTACAACAGAGACTGCGTCGTTGCTTCTGGGTATGAATGACAGTAG-A--CAAGACAA 2760 |||| |||||||||||| |||||||||||| |||||||||||||| | ||||| || Sbjct 2463 TACTTTGTCAGAGACTGCGTTGTTGCTTCTGGGAATGAATGACAGTAGTAAGCAAGAGAA 2522 Query 2761 GGCAAAGAAG-CAAAGATCAGATAATCCATTTTCATTTCCTCGCCAGAAGCGTTCTGTAA 2819 ||||| | || ||||||||||||| ||| ||||| |||||||| |||||||| || |||| Sbjct 2523 GGCAA-GTAGACAAAGATCAGATAGTCCGTTTTCGTTTCCTCGGCAGAAGCGATCAGTAA 2581 Query 2820 GACCTCGGATGTACCTCTCCATTGACTCGGATTCTGAA 2857 |||| ||| |||| ||||| |||||||| ||||| ||| Sbjct 2582 GACCCCGGCTGTATCTCTCAATTGACTCAGATTCAGAA 2619 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 121622152285 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5