BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G64840.1 Length=2429 Score E Sequences producing significant alignments: (Bits) Value Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1 3435 0.0 Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1 1753 0.0 > Ahg496704 jgi|Araly1|496704|fgenesh2_kg.8__2520__AT5G64840.1 Length=2367 Score = 3435 bits (1860), Expect = 0.0 Identities = 2091/2201 (95%), Gaps = 22/2201 (1%) Strand=Plus/Plus Query 51 TCTGCTGCTTCTTCTTCTTCTTCAGTAGAGCG-AGATTCTCTCGCGCTCTCTATCGCT-- 107 |||||| |||||||||||||||| |||||| | ||||||||||||| || ||| Sbjct 25 TCTGCTTCTTCTTCTTCTTCTTCGGTAGAG-GAAGATTCTCTCGCG--AGAGATTGCTCA 81 Query 108 ACATATAACCATGGGTTTATCAACGAATCTCCATAGCCTCGACCTCCGTTCAACTTTCTT 167 || | | ||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 82 ACTTCTCTCCATGGGCTTATCAACAAATCTCCATAGCCTCGACCTCCGTTCAACATTCTT 141 Query 168 CACCGG--T-C-TAC--GTACATCTCCAATCCCTTCCAATTTCATCAAAATCTCTTCCAT 221 |||||| | | | | || |||||||||||||||||||||||||||||||||||||||| Sbjct 142 CACCGGTCTCCGTCCTTGTCCATCTCCAATCCCTTCCAATTTCATCAAAATCTCTTCCAT 201 Query 222 TTCCAACCCTAGACGC-GATATCTCCACCATCAGAGCCCAAGTCTCCACCATCAGCCTCG 280 |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 202 TTCCAACCCTAGACGCGGA-ATCTCCACCATCAGAGCCCAAGTTTCCACCATCAGCCTCG 260 Query 281 AGACCTCCGTTAAACAGCGTCAAGACGAAATCGAATCTCTTTTCTCG-AAGCAACCCTCT 339 |||||||||||||| |||||||||||||||||||||| ||||||||| || ||| |||| Sbjct 261 AGACCTCCGTTAAAGAGCGTCAAGACGAAATCGAATCGCTTTTCTCGAAACCAA-CCTC- 318 Query 340 C-AGCAAGACTCCGATCGGAAACGAAACGGGAAGAGTTCCAAAAACGGAGCTTCTGGGAT 398 | | ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| Sbjct 319 CGAACAAGACTCCGACCGGAGACGAAACGGGAAGAATTCCAAAAACGGAGCTTCTGGGAT 378 Query 399 ATCTTCAGGTGTGAAGCTAGAGAACATAAGGAAAAGCTACAAAGGCGTGACTGTGCTTAA 458 || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 379 TTCGTCAGGTGTGAAGCTAGAGAACATAAGGAAGAGCTACAAAGGCGTGACTGTGCTTAA 438 Query 459 AGATGTGACATGGGAAGTGAAGAGAGGTGAGAAAGTAGGGTTAGTTGGTGTGAACGGAGC 518 ||||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||| Sbjct 439 AGATGTGACCTGGGAAGTGAAAAGGGGTGAGAAAGTAGGGTTAGTGGGAGTGAACGGAGC 498 Query 519 TGGGAAGACGACTCAGCTCAGGATTATCACTGGTCAAGAAGAGCCTGATTCTGGTAACGT 578 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 499 TGGGAAGACGACTCAGCTCAGGATTATCACTGGTCAAGAAGAGCCTGATTCAGGTAACGT 558 Query 579 AATCAAGGCCAAACCCAATATGAAAGTAGCTTTCTTGAGCCAGGAATTTGAGGTTTCGAT 638 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 559 AATCAAGGCCAAACCCAATATGAAAATAGCTTTCTTGAGCCAGGAATTTGAGGTTTCGAT 618 Query 639 GAGTAAGACTGTGAGGGAAGAGTTCATGACTGCTTTCAAGGAAGAGATGGAGATTACTGA 698 ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct 619 GAGTAAGACGGTGAGGGAAGAGTTCATGAGTGCTTTTAAGGAAGAGATGGAGATCACTGA 678 Query 699 GAAGCTTGAGAAAGTTCAGAAGGCTATTGAGGGATCTGTTGATGATTTGGATCTTATGGG 758 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 679 GAAGCTTGAGAAAGTTCAGAAGGCTATTGAAGGATCTGTTGATGATTTGGATCTTATGGG 738 Query 759 AAGGTTATTAGATGAATTTGATTTGTTGCAGAGACGAGCTCAGGCTGTGAATTTAGATTC 818 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 739 AAGGTTATTAGATGAATTTGATTTGTTGCAGAGACGAGCTCAGGCTGTGAATTTGGATTC 798 Query 819 CGTTGATGCTAAGATTAGTAAGTTGATGCCGGAATTAGGGTTTG-CTCCTGAGGATGCTG 877 ||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||| Sbjct 799 CGTTGATGCTAAGATTAGTAAGTTGATGCCGGAATTAGGTTTTGCCT-CAGAGGATGCTG 857 Query 878 ATAGGCTTGTGGCTTCGTTTAGTGGTGGATGGCAAATGAGAATGTCACTTGGAAAGATTT 937 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 858 ATAGGCTTGTGGCTTCCTTTAGTGGTGGATGGCAAATGAGAATGTCACTTGGAAAGATTT 917 Query 938 TGCTTCAGGATCCAGATTTGCTGCTACTTGATGAGCCGACAAATCATTTGGATCTTGATA 997 ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct 918 TGCTTCAGGATCCAGATTTGCTGCTTCTTGATGAGCCGACCAACCATTTGGATCTTGATA 977 Query 998 CTATTGAGTGGCTTGAAGGTTATTTGCAAAAGCAAGATGTGCCTATGGTTATTATTTCAC 1057 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 978 CTATTGAGTGGCTTGAAGGTTATTTGCAGAAGCAAGATGTGCCTATGGTTATTATTTCAC 1037 Query 1058 ATGACAGAGCCTTTCTTGATCAGTTATGTACTAAAATTGTGGAAACTGAGATGGGTGTGT 1117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1038 ATGACAGAGCCTTTCTTGATCAGTTATGTACTAAAATTGTGGAAACTGAGATGGGTGTGT 1097 Query 1118 CCAGGACATTTGAGGGTAATTATTCTCAGTATGTGATCTCAAAGGCTGAGTGGATCGAAA 1177 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1098 CCAGGACATTTGAGGGTAATTATTCTCAGTATGTGATCTCAAAGGCAGAGTGGATCGAAA 1157 Query 1178 CTCAGAATGCAGCGTGGGAAAAGCAACAGAAAGATATCGACTCAACTAAGGACTTGATCG 1237 ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1158 CTCAGAATGCAGCTTGGGAAAAGCAACAGAAAGAGATCGATTCAACTAAGGACTTGATCG 1217 Query 1238 CCAGGCTTGGTGCTGGTGCCAATTCTGGTCGTGCTTCCACTGCAGAAAAGAAACTAGAGA 1297 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1218 CTAGGCTTGGTGCTGGTGCCAATTCTGGTCGTGCTTCTACTGCAGAAAAGAAACTAGAGA 1277 Query 1298 AGCTTCAAGAACAGGAGCTAATAGAGAAGCCATTTCAGCGGAAGCAGATGAAGATTAGGT 1357 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct 1278 AGCTTCAAGAACAGGAGCTAATAGAAAAGCCATTTCAGCGGAAACAGATGAAGATAAGGT 1337 Query 1358 TTCCAGAGCGTGGGACAAGTGGAAGATCGGTAGTCAATGTTAAAAACATTGATTTTGGTT 1417 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1338 TTCCAGAGCGTGGAACAAGTGGAAGATCGGTAGTCAATGTTAAAAACATTGATTTTGGTT 1397 Query 1418 TCGAGGATAAGATGCTATTTAAGAAGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCG 1477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1398 TCGAGGATAAGATGCTATTTAAGAAGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCG 1457 Query 1478 CCATCCTTGGGCCAAACGGTTGTGGGAAA-AGTACGTTATTGAAGCTAATTATGGGTTTA 1536 |||| |||| || |||||||| || ||| ||||||||||||||| |||||||||||||| Sbjct 1458 CCATTATTGGCCCGAACGGTTGCGG-AAAGAGTACGTTATTGAAGTTAATTATGGGTTTA 1516 Query 1537 GAGAAGCCTGTGAAAGGTGAAGTTATTCTTGGAGAGCACAATGTACTGCCAAACTACTTT 1596 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 GAAAAGCCTATGAAAGGTGAAGTTATTCTTGGAGAGCACAATGTACTGCCAAACTACTTT 1576 Query 1597 GAACAGAATCAGGCTGAGGTCCTTGATTTGGATAAAACAGTGCTTGAAACTGTTTGTGAA 1656 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1577 GAACAGAATCAGGCCGAGGTCCTTGATTTGGATAAAACAGTGCTTGAAACAGTTTGTGAA 1636 Query 1657 GCTGCAGAAGACTGGAGAAGTGATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAA 1716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1637 GCTGCAGAAGACTGGAGAAGTGATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAA 1696 Query 1717 GCAGACATGCTTGATCGAAAGGTCTCTCTTTTAAGTGGTGGGGAGAAAGCGCGTCTTGCT 1776 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1697 GCAGACATGCTTGATCGAAAGGTCTCTCTTTTAAGCGGTGGTGAGAAAGCGCGTCTTGCT 1756 Query 1777 TTCTGCAAATTCATGGTGACGCCATCTACTTTACTCGTTTTGGACGAACCAACCAATCAC 1836 |||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| Sbjct 1757 TTCTGCAAATTCATGGTGACGCCATCAACTTTTCTCGTTCTGGACGAACCAACTAATCAC 1816 Query 1837 TTAGACATTCCTTCAAAAGAAATGCTCGAGGAAGCGATAAACGAGTACCAAGGTACAGTC 1896 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1817 TTAGACATTCCTTCAAAAGAAATGCTTGAGGAAGCGATAAACGAGTACCAAGGTACAGTC 1876 Query 1897 ATTGCGGTATCCCACGATCGATACTTCATCAAACAAATCGTTAACAGAGTGATAGAAGTA 1956 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1877 ATCGCGGTATCCCACGATCGATACTTTATCAAACAAATCGTTAACAGAGTGATAGAAGTA 1936 Query 1957 GAAGATGGTTGTTTAGAAGATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTG 2016 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1937 GAGGATGGTTGTTTAGAAGATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTG 1996 Query 2017 GATGCTAGAACAAAGGAGCTAGAGAGAGAAGCAGAGCTAGAAGAGAAAGCACCAAAAGTG 2076 |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1997 GATGCTAGGGCAAAAGAGCTGGAGAGAGAAGCAGAGCTAGAAGAGAAAGCTCCAAAAGTG 2056 Query 2077 AAGGCAAAGTCAAAGATGTCAAAAGCAGAGAAAGAAGCGAGGAAGAAGCAGAAGATGCAA 2136 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2057 AAGGCAAAGTCAAAGATGTCAAAAGCTGAGAAAGAAGCGAGGAAGAAGCAGAAGATGCAA 2116 Query 2137 GCATTTCAACAAGCTAAACAGAAGTCAAAGGCTAGCAAGAACTCCAAGAGATGGAACTGA 2196 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2117 GCGTTTCAACAAGCTAAACAGAAATCAAAGGCTAGCAAGAACTCCAAGAGATGGAACTGA 2176 Query 2197 ACAAACATTGAAAACTGAAAGGAGTCAAGATTTATAAAAAA 2237 ||||||| ||||||||||||||||||||||||| |||||| Sbjct 2177 ACAAACACGGAAAACTGAAAGGAGTCAAGATTTACAAAAAA 2217 Score = 213 bits (115), Expect = 5e-54 Identities = 142/154 (92%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 2268 TGTGGAATGTATATAGATATTACTTTTAGAAATGCAGAGAGAGTATTAATGTTTCTACAA 2327 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2218 TGTGGAATGTATATAGATA-TACTTTTAGAAATGCAGAGAGAGTATTAATGTTTCTACAA 2276 Query 2328 CACTTGAGCCCCATTGGGTAAAAATTAAGAAACTTTATT--CTCAAACATGGAACCGAAC 2385 ||||||||||||||||||| ||| ||||||||||||||| |||||| ||||| ||| Sbjct 2277 CACTTGAGCCCCATTGGGTTAAA-TTAAGAAACTTTATTGTCTCAAAAATGGAT--GAAT 2333 Query 2386 CGAACCAAACCATTGAATTTCAGTGCAAAACCTA 2419 |||| | ||||||||||||||||||||||||||| Sbjct 2334 CGAATCGAACCATTGAATTTCAGTGCAAAACCTA 2367 > Ahg487818 jgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1 Length=2037 Score = 1753 bits (949), Expect = 0.0 Identities = 1574/1872 (84%), Gaps = 58/1872 (3%) Strand=Plus/Plus Query 350 CCGATCGGAAAC-GAAACGGGAAG-AGTTCCAAA-AACGGAGCTTCTGGGATATCTTCAG 406 |||||||||| | | | ||| ||| | | |||| || || || ||| ||| || || | Sbjct 191 CCGATCGGAAGCTG-ATCGGTAAGCA-AT-CAAACAATGGTGCGTCTTCGATTTCGTCTG 247 Query 407 GTGTGAAG-CTAGAGAACATAAGGAAAAGCTACAAAGGCGTGACTGTGCTTAAA-GATGT 464 | ||| || || |||||||| || || ||||| ||||||| || | || |||| ||||| Sbjct 248 GAGTG-AGACTTGAGAACATTAGTAAGAGCTATGAAGGCGTTACAGGGC-TAAAGGATGT 305 Query 465 GACATGGGAAGTGAAGAGAGGTGAGAAAGTAGGGTTAGTTGGTGTGAACGGAGCTGGGAA 524 ||| ||||||||||||| ||| || |||||||| ||| | || || ||||| || ||||| Sbjct 306 GACTTGGGAAGTGAAGAAAGGAGAAAAAGTAGGTTTAATCGGCGTTAACGGTGCGGGGAA 365 Query 525 GACGACTCAGCTCAGGATTATCACTGGTCAAGAAGAGCCTGATTCTGGTAACGTAATCAA 584 |||||| ||||||| ||| || || ||||||||||| |||||||| || ||||| || Sbjct 366 GACGACACAGCTCAAGATCATAACGGGTCAAGAAGAACCTGATTCAGGAAACGTGATTTG 425 Query 585 GGCCAAACCCAATATGAAAGTAGCTTTCTTGAGCCAGGAATTTGAGGTTTCGATGAGTAA 644 ||||||||||||| ||||||| ||||||||||| || ||||| |||||||||||| | || Sbjct 426 GGCCAAACCCAATTTGAAAGTTGCTTTCTTGAGTCAAGAATTCGAGGTTTCGATGGGGAA 485 Query 645 GACTGTGAGGGAAGAGTTCATGACTGC-TTTCAAGGAAGAGATGGAGATTA-CTGA-GAA 701 ||| |||| |||||||||||||| ||| ||| |||||||||||||| | || | | ||| Sbjct 486 GACAGTGAAGGAAGAGTTCATGAGTGCGTTT-AAGGAAGAGATGGA-AGTAGC-AAGGAA 542 Query 702 GCTTGAGAAAGTT-CAGAAGGCTATTGAGGGATCTGTTGATGATTTGGATCTTATGGGAA 760 ||||||| | ||| |||||||| ||||| | | ||||||||||||| || || ||||||| Sbjct 543 GCTTGAG-AGGTTGCAGAAGGCGATTGAAGAAGCTGTTGATGATTTAGAACTAATGGGAA 601 Query 761 GGTTATTAGATGAATTTGATTTGTTGCAGAGACGAGCTC-AG-GCTGTGAATTTAGATTC 818 |||| |||| ||||| |||||||||||||||||||||| || | | || |||| ||||| Sbjct 602 AGTTACTAGACGAATTCGATTTGTTGCAGAGACGAGCTCAAGAGGT-TG-ATTTGGATTC 659 Query 819 CGTTGATGCTAAGATTAGTAAG-TTGATGCCGGAATTAGGG-TT-TGCTCCTGAGGATGC 875 || |||||||| || |||||| || ||| ||||||||||| || || | | |||||||| Sbjct 660 TGTCGATGCTAAAATCAGTAAGCTT-ATGTCGGAATTAGGGCTTGTG-T-CGGAGGATGC 716 Query 876 TGATAGGCTTGTGGCTTCGTTTAGTGGTGGATGGCAAATGAGAATGTCACTTGGAAAGAT 935 ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| Sbjct 717 AGATAGGCTTGTGGCTTCTTTTAGTAGTGGATGGCAAATGAGAATGTCACTTGGGAAGAT 776 Query 936 TTTGCTTCAGGATCCAGATTTGCTGCTACTT-GATGAGCCGACAAATCATTTGGATCTTG 994 |||||||||| |||||||||| |||||| || |||||||| || |||||||||||||||| Sbjct 777 TTTGCTTCAGAATCCAGATTTACTGCTA-TTGGATGAGCCAACGAATCATTTGGATCTTG 835 Query 995 ATACTATTGAGTGGCTTGAAGGTTATTTGCAA-AAGCAAGATGTGCCTATGGTTATTATT 1053 ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| || Sbjct 836 ATACTATTGAGTGGCTTGAAGGTTACTTG-AATAAGCAAGATGTGCCTATGGTTATAATA 894 Query 1054 TCACATGACAGAGCCTTTCTTGATCAGTTATGTACTAAAATTGTGGAAACTGAGATGGGT 1113 |||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||| Sbjct 895 TCACATGACAGAGCGTTTCTTGATCAGTTGTGTACTAAAATTGTGGAAACCGAAATGGGA 954 Query 1114 GTGTCCAGGACATTT-GAGGGTAATTATTCTCAGTATGTGATCTCAAAGGCTGAGTGGAT 1172 || || ||||| ||| ||||||||||| ||||||||||| || |||||||| |||||| | Sbjct 955 GTTTCGAGGAC-TTTCGAGGGTAATTACTCTCAGTATGTAATTTCAAAGGCAGAGTGGGT 1013 Query 1173 CGAAACTCAGAATGCAGCGTGGGAAAAGCAACAGAAAGATATCGACTCAACTAAGGACTT 1232 |||| ||||| |||| || ||||| |||||||||||||| || || |||| ||||| || Sbjct 1014 CGAAGCTCAGTATGCTGCTTGGGAGAAGCAACAGAAAGAGATTGAAGCAACAAAGGATTT 1073 Query 1233 GATCGCCAGGCTTGGTGCTGGTGCCAATTCTGGTCGTGCTTCCACTGCAGAAAAGAAACT 1292 ||| | ||||| ||||||| || ||||||||||| ||||| | |||||||||||||| Sbjct 1074 GATTACTAGGCTAAGTGCTGGAGCAAATTCTGGTCGAGCTTCTTCAGCAGAAAAGAAACT 1133 Query 1293 AGAGAAGCTTCAAGAACAGGAGCTAATAGAGAAGCCATTTCAGCGGAAGCAGATGAAGAT 1352 ||||||||||||||| |||||| |||||||||||||||||||||||| || ||||| || Sbjct 1134 GGAGAAGCTTCAAGAAGAGGAGCAAATAGAGAAGCCATTTCAGCGGAAACAAATGAAAAT 1193 Query 1353 TAGGTTTCCAGAGCGTGGGAC-AAGTGGAAGATCGGTAGTCAATGTTAAAAA-CATTG-A 1409 |||||||| || |||| | ||| |||||||| ||||||| |||||| || | ||| | Sbjct 1194 CAGGTTTCCGGAATGTGG-ATTAAGCGGAAGATCTGTAGTCACTGTTAAGAATC-TTGGA 1251 Query 1410 TTTTGGTTTCGAGGATAAGATGCTATTTAAGAAGGCTAATCTATCAATAGAAAGAGGGGA 1469 ||| ||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||| || Sbjct 1252 TTT-GGTTTTGAGGATAAGATGTTATTTAACAAGGCAAATCTAGCGATAGAAAGAGGAGA 1310 Query 1470 GAAAATCGCCATCCTTGGGCCAAACGGTTGTGGGAAAAGTACGTTATTGAAGCTAATTAT 1529 |||| |||| || |||| |||||||| || || |||||||| || ||||| || ||||| Sbjct 1311 GAAAGTCGCTATAATTGGTCCAAACGGGTGCGGTAAAAGTACATTGTTGAAACTGATTAT 1370 Query 1530 GGGTTTAGAGAAGCCTGTGAAAGGTGAAGTTATTCTTGGAGAGCACAATGTACT-GCCAA 1588 |||||| ||||||||| ||| ||||||||| ||||| || ||||||||||| || ||| | Sbjct 1371 GGGTTTGGAGAAGCCTATGAGAGGTGAAGTGATTCTCGGGGAGCACAATGT-CTTGCCTA 1429 Query 1589 ACTACTTTGAACAGAATCAGGCTGAGG-TCCTTGATTTGGATAAAACAGTGCTTGAAACT 1647 ||||||| |||||||||||||| |||| || | |||||||||||||| ||| |||| || Sbjct 1430 ACTACTTCGAACAGAATCAGGCAGAGGCTC-TAGATTTGGATAAAACTGTGATTGAGACA 1488 Query 1648 GTTTGT-GAAGCTGCAGAAGACTGGAGAAGTGATGATATAAAAGGTCTTCTTGGACGCTG 1706 ||| || |||||||| | ||| ||||||| |||||||||||||| ||||||||| ||||| Sbjct 1489 GTT-GTTGAAGCTGCTGTAGATTGGAGAATTGATGATATAAAAGCTCTTCTTGGTCGCTG 1547 Query 1707 CAACTTCAAAGCAGACATGCTTG-ATCGAAAGGTCTCTCTTTTAAGTGGTGGGGAGAAAG 1765 |||||||||||| |||||| ||| || |||||||||||||||| |||||||| ||||| | Sbjct 1548 CAACTTCAAAGCTGACATG-TTGGATAGAAAGGTCTCTCTTTTGAGTGGTGGTGAGAAGG 1606 Query 1766 CGCGTCTTGCTTTCTGCAAATTCATGGTGACGCCATCTACTTTACTCGTTTTGGACGAAC 1825 | || ||||||||||||||||||||||||| ||||| ||| |||| || |||||||||| Sbjct 1607 CACGCCTTGCTTTCTGCAAATTCATGGTGAAACCATCCACTCTACTTGTGTTGGACGAAC 1666 Query 1826 CAACCAATCACTTAGACATTCCTTCAAAAGAAATGCTCGAGGAAGCGATAAACGAGTACC 1885 | ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct 1667 CCACCAATCACTTAGACATACCTTCAAAAGAAATGCTTGAGGAAGCGATAAATGAGTACA 1726 Query 1886 AAGGTACAGTCATTGCGGTATCCCACGATCGATACTTCATCAAACAAATCGTTAACAGAG 1945 |||| || ||||| || || || |||||| |||||||||| |||||||| |||||||||| Sbjct 1727 AAGGCACGGTCATCGCAGTCTCACACGATAGATACTTCATTAAACAAATTGTTAACAGAG 1786 Query 1946 TGATAGAAGT-AGAAGATGGTTGTTTAGAAG-ATTATGCAGGCGACTACAATTATTACTT 2003 | || ||||| ||| |||||| ||||| | | | |||||||| ||||||||||||||| | Sbjct 1787 TAATTGAAGTCAGA-GATGGTGGTTTA-ATGGACTATGCAGGAGACTACAATTATTACCT 1844 Query 2004 GGAGAAGAATCTGGATGCTAGAACAAAGGAGCTAGAGAGAGAAGCAGAGCTAGAAGAGAA 2063 ||||||||| | || |||||| ||| |||||| ||||| |||||||| | || || || Sbjct 1845 AGAGAAGAATGTTGAAGCTAGAGCAAGGGAGCTGGAGAGGGAAGCAGAATTGGAGGAAAA 1904 Query 2064 AGCACCAAAAGTGAAGGCAAAGTCAAAGATGTCAAAAGCAGAGAAAGAAGCGA-GGAAGA 2122 ||| ||||||||||| |||||||||||||||||||| || |||| |||||| | |||||| Sbjct 1905 AGCTCCAAAAGTGAAAGCAAAGTCAAAGATGTCAAAGGCTGAGAGAGAAGC-ACGGAAGA 1963 Query 2123 AGCAGAAGATGCAAGCATTTCAA-CAAGCTAAACAGAAGTCAAAGGCTAGCAAGAACT-C 2180 |||| |||||| |||| |||||| | | ||| | ||||| ||| | ||||| || | | Sbjct 1964 AGCAAAAGATGAAAGCGTTTCAAGCTTCCAAAA-ACAAGTCTAAGTCCAGCAAAAA-TGC 2021 Query 2181 CAAGAGATGGAA 2192 |||||||||||| Sbjct 2022 CAAGAGATGGAA 2033 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91530858735 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5