BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G65620.1 Length=2514 Score E Sequences producing significant alignments: (Bits) Value Ahg951411 jgi|Araly1|951411|scaffold_803298.1 4058 0.0 Ahg487887 jgi|Araly1|487887|fgenesh2_kg.6__1021__AT5G10540.1 2455 0.0 Ahg497269 jgi|Araly1|497269|fgenesh2_kg.112__1__AT5G65620.1 2250 0.0 > Ahg951411 jgi|Araly1|951411|scaffold_803298.1 Length=2415 Score = 4058 bits (2197), Expect = 0.0 Identities = 2336/2404 (97%), Gaps = 5/2404 (0%) Strand=Plus/Plus Query 2 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCCTCTCTCAATCTT 61 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCGTCTCTCAATCTT 63 Query 62 CTTCGTCGATCGCCAAAACCCAAATATTTCTCATCTTCTTCTTGTCATTTTCGTCCCTCA 121 |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 64 CTTCGTCGTTCACCAAAACCCAAATATTTCTCATCTTCTTCTTGTCAATTTCGTCCCTCA 123 Query 122 ACTTTTCGTAAATCATATCCTTGCCCCATCTGGtcttcttctttctctttttgtctccct 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 124 ACTTTTCGTAAATCATATCCTTGCCCCATCTGGTCTTCTTCTTTCTCTTTCTGTCTCCCT 183 Query 182 cctcctagatccaccacttccacctctctctcctcctcctctttccgccccttctcctct 241 |||||||||||||| || ||||||||||||||||||| | | ||||| |||||||||||| Sbjct 184 CCTCCTAGATCCACTACCTCCACCTCTCTCTCCTCCT-C-C-TTCCGTCCCTTCTCCTCT 240 Query 242 cctccgtccatgtcttccgccgccgctgccgccgTGGAATCCGTCGTCTCCGACGAGACT 301 |||||||| |||||||||||||||||||||||||| || || || ||||||| |||||| Sbjct 241 CCTCCGTCTATGTCTTCCGCCGCCGCTGCCGCCGTAGACTCTGTTATCTCCGAGGAGACT 300 Query 302 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 360 Query 362 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 420 Query 422 CTAGAGAAATCTGTGGAGCCAACATGGCCAAAACTGGTGGAACCATTAGAGAAAATCGTT 481 ||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||| Sbjct 421 CTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCATTAGAGAAAATCGTT 480 Query 482 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAGGCTGTCAAGGACACACCT 541 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 481 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACACACCT 540 Query 542 GAGCTACGTGCTGCCATCGAAGACGTTCAGCCAGAGAAAGTGAAGTTCCAGCTCAGGTTG 601 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 541 GAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCAGATTG 600 Query 602 GGGCAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 661 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 660 Query 662 TCGCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATAAAGGAGGCGGTTCTCATT 721 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 661 TCTCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATTAAGGAGGCGGTTCTCATA 720 Query 722 GGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAATAAAATTGAACAGGAACTCGAA 781 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 721 GGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAACAAAATTGAACAGGAACTCGAA 780 Query 782 AAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCAACAAAGAAATTTGAAAAGTTG 841 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 781 AAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCTACAAAGAAATTTGAAAAGTTG 840 Query 842 ATAACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTTGGGCTATTCGCACAA 901 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 841 ATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTCGGGCTATTCGCACAA 900 Query 902 GCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCATTACA 961 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 GCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCATTACA 960 Query 962 CTGGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAAAACCGTGCTCTGCGTGAG 1021 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 961 CTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAGAACCGTGCTCTGCGTGAG 1020 Query 1022 GAAGTCTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACGGCAATT 1081 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1021 GAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACAGCAATT 1080 Query 1082 ATTGACCAGATTTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACAACAATTAC 1141 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 ATCGACCAGATCTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACAACAATTAC 1140 Query 1142 GCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCAGAGCTTTTAGAG 1201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCAGAGCTTTTAGAG 1200 Query 1202 AAGCTTCGTAGTGCATCCTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAAGAGTTTC 1261 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 AAGCTTTGTAGTGCATCTTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAAGAGTTTC 1260 Query 1262 GCAAAGAACCAGGGTGCTGCAGAATCTGACAGTATGACTCATTGGGACACCACTTTCTGG 1321 |||||| |||||||||| ||||||||||||||| ||||||| |||||||||||||||||| Sbjct 1261 GCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTGACTCACTGGGACACCACTTTCTGG 1320 Query 1322 AGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTACGTCCATACTTC 1381 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1321 AGTGAGAGGCTTCGTGAATCCAAATATGATATTAATGAGGAAGAACTACGTCCATACTTC 1380 Query 1382 TCACTGCCAAAGGTTATGGATGGACTTTTCAGTCTAGCTAAGACACTTTTTGGAATTGAT 1441 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1381 TCACTACCAAAGGTTATGGATGGACTTTTCAGTCTAGCTAAGACACTATTTGGAATTGAT 1440 Query 1442 ATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAATGATGTTCGGTTCTACCGCGTC 1501 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1441 ATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAACGATGTTCGGTTCTACCGCGTC 1500 Query 1502 AAAGATTCTTCTGGGAACCCAATCGCTTACTTTTACTTTGATCCATACTCTCGCCCGTCA 1561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1501 AAAGATTCTTCTGGGAACCCAATCGCTTACTTTTACTTTGATCCATACTCTCGCCCTTCA 1560 Query 1562 GAGAAAAGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAGTCATGGCTCAG 1621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1561 GAGAAAAGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAGTCATGGCTCAG 1620 Query 1622 AAAGGCTCTTCTGTTAGGCTGCCTGTTGCACACATGGTCTGCAACCAAACTCCACCAGTA 1681 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1621 AAAGGCTCTTCTGTTAGGCTTCCTGTTGCACACATGGTCTGCAACCAAACTCCACCAGTA 1680 Query 1682 GGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTCATGAATTTGGA 1741 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1681 GGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTCATGAATTTGGA 1740 Query 1742 CATGCTCTTCAGCACATGCTTACGAAGCAGGATGAGGGGCTAGTTGCTGGTATCCGAAAT 1801 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1741 CATGCTCTTCAGCACATGCTTACGAAGCAGGATGAAGGGCTAGTGGCTGGTATCCGAAAT 1800 Query 1802 ATCGAGTGGGACGCGGTTGAATTACCATCACAGTTTATGGAGAATTGGTGCTACCACAGG 1861 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1801 ATCGAGTGGGACGCAGTTGAATTACCATCACAGTTTATGGAGAATTGGTGCTACCACAGG 1860 Query 1862 GACACTTTAATGAGCATTGCTAAGCATTACGAAACAGGAGAAACACTCCCAGAGGAAGTA 1921 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1861 GACACTTTAATGAGCATTGCTAAGCATTACGAAACAGGAGAAACACTCCCAGAGGAAGTA 1920 Query 1922 TACAAGAAACTCCTGGCCGCAAGAACATTCCGTGCAGGGTCCTTTAGTCTTCGTCAGTTG 1981 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1921 TACAAGAAACTCCTGGCCGCAAGAACATTCCGCGCAGGGTCCTTTAGTCTTCGTCAGTTG 1980 Query 1982 AAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATACGTACCAGGAGGACCAGAGTCC 2041 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1981 AAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATATGTACCAGGAGGACCAGAGTCC 2040 Query 2042 ATCTATGACGTAGATCAAAGGGTATCAGTAAAAACCCAAGTTATCCCTCCACTTCCTGAG 2101 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2041 ATCTATGACGTAGATCAAAGGGTATCAGTGAAAACCCAAGTTATCCCTCCACTTCCTGAG 2100 Query 2102 GATAGATTTCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGGATATTAC 2161 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2101 GATAGATTCCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGGATATTAC 2160 Query 2162 AGTTACAAGTGGGCAGAAGTTTTGTCTGCTGATGCATTTTCAGCATTTGAAGACGCTGGA 2221 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2161 AGTTACAAGTGGGCAGAAGTTTTGTCTGCAGATGCATTTTCAGCATTTGAAGACGCTGGA 2220 Query 2222 CTAGACGACATCAAGGCTGTTAAAGAAACAGGACAGAGATTCAGAAACACCATACTTGCA 2281 ||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 2221 CTAGATGACATCAAGGCTGTGAAAGAAACAGGACAGAGATTCAGAGACACCATACTTGCA 2280 Query 2282 CTTGGAGGAGGGAA-AGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAGAACCTTC 2340 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2281 CTTGGAGGAGG-AAGAGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAGAACCTTC 2339 Query 2341 ACCCGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTTAACTCTT 2400 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2340 ACCAGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTTAACTCTT 2399 Query 2401 ATAT 2404 |||| Sbjct 2400 ATAT 2403 > Ahg487887 jgi|Araly1|487887|fgenesh2_kg.6__1021__AT5G10540.1 Length=2826 Score = 2455 bits (1329), Expect = 0.0 Identities = 1854/2104 (88%), Gaps = 50/2104 (2%) Strand=Plus/Plus Query 300 CTCTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATG 359 |||| |||||||||||||| |||||| | || || |||||||||||||| || ||||||| Sbjct 62 CTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCTGTTGATG 121 Query 360 C-CAGTCATGTTC-GTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGA 417 | || |||| || | ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 122 CTCA-CCATG-TCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGA 179 Query 418 GGAGCTAGAGAAATCTGTGGAGCCAACATGGCCAAAACTGGTGGAACCATTAGAGAAAAT 477 | ||||||| ||| |||| ||||| ||||||||||||| ||||| ||||||||||| || Sbjct 180 GCAGCTAGAAAAAACTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGAT 239 Query 478 CGTTGATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAGGCTGTCAAGGACAC 537 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 240 TATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACAC 299 Query 538 ACCTGAGCTACGTGCTGCCATCGAAGACGTTCAGCCAGAGAAAGTGAAGTTCCAGCTCAG 597 |||||||| ||||||||||| ||||| |||||||||||||| ||||||| ||||||||| Sbjct 300 GCCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCAGAGAAGGTGAAGTACCAGCTCAG 359 Query 598 GTTGGGGCAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTG 657 |||||| || ||||| || ||||||||||| |||||||||||||| ||||| ||||| || Sbjct 360 GTTGGGACAGAGCAAACCCATTTACAATGCATTTAAAGCTATTCGAGAATCGCCTGACTG 419 Query 658 GTCATCGCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATAAAGGAGGCGGTTCT 717 | | ||| || | | || || || | | |||||||||||||||||||| Sbjct 420 G--A--AATCACTG-A-C-CG--AA-GC----T----CCGCAAATAAAGGAGGCGGTTCT 461 Query 718 CATTGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAATAAAATTGAACAGGAACT 777 || ||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||| Sbjct 462 CAGTGGTATTGCTCTTGAAGACGACAAGAGAGAAGAATTTAACAAAATTGAACAGGAACT 521 Query 778 CGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCAACAAAGAAATTTGAAAA 837 ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 522 TGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAATTTGAAAA 581 Query 838 GTTGATAACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTTGGGCTATTCGC 897 |||||||||||||||||||||||||||||| ||||| |||||||| ||||| | ||||| Sbjct 582 GTTGATAACAGACAAGAAAGAGATCGAGGGGTTGCCGCCATCTGCACTTGGATTGTTCGC 641 Query 898 ACAAGCAGCTGTC-TCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCA 956 ||||||||||| | |||||||| |||||||||||||||||||| | |||||||||| ||| Sbjct 642 ACAAGCAGCTG-CTTCCAAGGGACATGAAAATGCAACTGCTGACACTGGACCATGGCTCA 700 Query 957 TTACACTGGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAAAACCGTGCTCTGC 1016 ||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct 701 TTACACTCGATGCTCCTAGTTATCTTCCCGTCATGCAACATGCCAAAAACCGAGCTCTGC 760 Query 1017 GTGAGGAAGTCTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACGG 1076 | ||||||||||||||||||||| |||| ||||||||||| || ||||| |||||||| | Sbjct 761 GCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAG 820 Query 1077 CAATTATTGACCAGATTTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACA-AC 1135 ||||||| ||||| || ||||||||||| |||||||| ||||||| ||||||||||| | Sbjct 821 CAATTATCGACCAAATCTTGAAGCTTCGATTGGAAAAGGCTAAGCATCTTGGTTACAGA- 879 Query 1136 AATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCA-GAGCT 1194 ||||| ||||||||||||||||| | ||||||||||||||| |||||||||| | ||||| Sbjct 880 AATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTAGAGAAAGCAG-ATGAGCT 938 Query 1195 TTTAGAGAAGCTTCGTAGTGCATCCTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAA 1254 |||| |||||||| ||||| || |||||| |||||||||||||||| |||||||| || Sbjct 939 ACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAA 998 Query 1255 GAGTTTCGCAAAGAACCAGGGTGCTGCAGAATCTGACAGTATGACTCATTGGGACACCAC 1314 |||||| ||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||| Sbjct 999 GAGTTTTGCAAAGAACCAAGGTGCTGCAGAAGCTGACAGTTTGACTCACTGGGACATCAC 1058 Query 1315 TTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTACGTCC 1374 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1059 TTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACC 1118 Query 1375 ATACTTCTCACTGCCAAAGGTTATGGATGGACTT-TTCAGTCTAGCTAAGACACTTTTTG 1433 |||||||||||||||||||||||||||| | || ||| |||||||||||||||| |||| Sbjct 1119 TTACTTCTCACTGCCAAAGGTTATGGATGCA-TTATTCGGTCTAGCTAAGACACTATTTG 1177 Query 1434 GAATTGATATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAATGATGTTCGGTTCT 1493 |||||||| ||| |||||||||||| |||||||||||||||||| |||||| |||||| Sbjct 1178 GAATTGATGTTGTGCCAGCAGATGGTGTAGCTCCGGTCTGGAACAGCGATGTTAGGTTCT 1237 Query 1494 ACCGCGTCAAAGATTCTTCTGGGAACCCAA-TCGCTTACTTT-TACTTTGATCCATACTC 1551 || | ||||||||||||||||| || |||| | ||||| ||| ||||||||||| ||||| Sbjct 1238 ACTGTGTCAAAGATTCTTCTGGAAATCCAACT-GCTTA-TTTCTACTTTGATCCCTACTC 1295 Query 1552 TCGCCCGTCAGAGAAA-AGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAG 1610 ||| || ||||| ||| |||| ||||||||||||||||| ||| |||| |||||||||| Sbjct 1296 TCGTCCTTCAGA-AAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAG 1354 Query 1611 TCATGGCTCAGAAAGGCTCTTCTGTTAGGCTGCCTGTTGCACACATGGTCTGCAACCAAA 1670 ||||||| ||||| || || || |||||||| |||||||| || |||||||||||||||| Sbjct 1355 TCATGGCCCAGAAGGGTTCCTCCGTTAGGCTCCCTGTTGCTCAAATGGTCTGCAACCAAA 1414 Query 1671 CTCCACCAGTAGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTC 1730 |||||||||| ||||||||||||||||||||||||||||||||||||||||| || || | Sbjct 1415 CTCCACCAGTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCC 1474 Query 1731 ATGAATTTGGACATGCTCTTCAGCACATGCTTACGAA-GCAGGATGAGGGGCTAGTTGCT 1789 |||||||||| |||||||||||||| |||||||| || | || ||||||||||||| ||| Sbjct 1475 ATGAATTTGGCCATGCTCTTCAGCATATGCTTACCAAAGAAG-ATGAGGGGCTAGTGGCT 1533 Query 1790 GGTATCCGAAATATCGAGTGGGACGCGGTTGAATTACCATCACAGTTTATGGAGAATTGG 1849 ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||| Sbjct 1534 GGTATCCGAAATATCGAGTGGGATGCAGTTGAATTACCTTCACAGTTTATGGAGAACTGG 1593 Query 1850 TGCTACCACAGGGACACTTTAATGAGCATTGCTAAGCATTA-CGAAACAGGAGAAACACT 1908 |||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| || Sbjct 1594 TGCTACCACAGGGATACCTTAATGAGCATTGCTAAGCATTATC-AAACAGGAGAAACTCT 1652 Query 1909 -CCCAGAGGAA-GTATACAAGAAACTCCTGGCCGCAAGAACATTCCGTGCAGGGTCCTTT 1966 ||| ||| || ||||||||||| || ||||| |||||||||||||||||||||||| || Sbjct 1653 TCCC-GAG-AATGTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTT 1710 Query 1967 AGTCTTCGTCAGTTGAAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATACGTACCA 2026 |||||||| |||||||| ||||| | |||||||| |||||||||||||||||| | ||| Sbjct 1711 AGTCTTCGCCAGTTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCA 1770 Query 2027 GGAGG-ACCAGAGTCCATCTATGACGTAGATCAAAGGGTATC-AGTAAAAACCCAAGTTA 2084 || || || |||| ||||||| || || ||||||||||| || | ||||||| ||||| | Sbjct 1771 GGTGGGAC-AGAGACCATCTACGATGTTGATCAAAGGGTGTCCA-TAAAAACACAAGTGA 1828 Query 2085 TCCCTCCACTTCCTGAGGATAGATTTCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGAT 2144 |||||||||||||||| |||||||| ||||||||||||||||| || ||||| || || | Sbjct 1829 TCCCTCCACTTCCTGAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTT 1888 Query 2145 ATGCAGCTGGATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCTGATGCATTTTCAG 2204 ||||||||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||| Sbjct 1889 ATGCAGCTGGATACTACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAG 1948 Query 2205 CATTTGAAGACGCTGGACTAGACGACATCAAGGCTGTTAAAGAAACAGGACAGAGATTCA 2264 | |||||||| ||||| | || ||||||||||||||||||||||||||||| ||||||| Sbjct 1949 CTTTTGAAGATGCTGGGTTGGATGACATCAAGGCTGTTAAAGAAACAGGACAAAGATTCA 2008 Query 2265 GAAACACCATACTTGCACTTGGAGGAGGGAAAGCGCCTCTTAAGGTGTTTGTTGAGTTTA 2324 ||||||| ||||| || || |||||||| ||||| ||||| || |||||||| ||||| | Sbjct 2009 GAAACACAATACTCGCTCTGGGAGGAGGAAAAGCACCTCTAAAAGTGTTTGTGGAGTTCA 2068 Query 2325 GAGGACGAGAACCTTCACCC-GAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCT 2383 |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| ||| Sbjct 2069 GAGGACGAGAACCTTC-CCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCT 2127 Query 2384 GCTT 2387 |||| Sbjct 2128 GCTT 2131 > Ahg497269 jgi|Araly1|497269|fgenesh2_kg.112__1__AT5G65620.1 Length=1958 Score = 2250 bits (1218), Expect = 0.0 Identities = 1360/1426 (95%), Gaps = 19/1426 (1%) Strand=Plus/Plus Query 2 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCCTCTCTCAATCTT 61 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCGTCTCTCAATCTT 60 Query 62 CTTCGTCGATCGCCAAAACCCAAATATTTCTCATCTTCTTCTTGTCATTTTCGTCCCTCA 121 |||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 61 CTTCGTCGTTCACCAAAACCCAAATATTTCTCATCTTCTTCTTGTCAATTTGGTCCCTCA 120 Query 122 ACTTTTCGTAAATCATATCCTTGCCCCATCTGGtcttcttctttctctttttgtctccct 181 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 121 ACTTTTCGAAAATCATATCCTTGCCCCATCTGGTCTTCTTCTTTCTCTTTCTGTCTCCCT 180 Query 182 cctcctagatccaccacttccacctctctctcctcctcctctttccgccccttctcctct 241 |||||||||||||| || ||||||||||||||||||| | | ||||| |||||||||||| Sbjct 181 CCTCCTAGATCCACTACCTCCACCTCTCTCTCCTCCT-C-C-TTCCGTCCCTTCTCCTCT 237 Query 242 cctccgtccatgtcttccgccgccgctgccgccgTGGAATCCGTCGTCTCCGACGAGACT 301 |||||||| |||||||||||||||||||||||||| || || || ||||||| |||||| Sbjct 238 CCTCCGTCTATGTCTTCCGCCGCCGCTGCCGCCGTAGACTCTGTTATCTCCGAGGAGACT 297 Query 302 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 357 Query 362 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 417 Query 422 CTAGAGAAATCTGTGGAGCCAACATGGCCAAAACTGGTGGAACCATTAGAGAAAATCGTT 481 ||||||||||||||||||||| | |||||||| ||||| ||||| ||||||||||||||| Sbjct 418 CTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCTTTAGAGAAAATCGTT 477 Query 482 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAGGCTGTCAAGGACACACCT 541 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 478 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACACACCT 537 Query 542 GAGCTACGTGCTGCCATCGAAGACGTTCAGCCAGAGAAAGTGAAGTTCCAGCTCAGGTTG 601 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 538 GAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCAGATTG 597 Query 602 GGGCAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 661 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 GGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 657 Query 662 TCGCTCAGTGAAGCTCGTCAACGCTTAGT---A-G----A-------AGCTCAAATAAAG 706 || |||||||||||||||||||||||||| | | | ||||||||||||| Sbjct 658 TCTCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGGCAATATGTTTTCAGCTCAAATAAAG 717 Query 707 GAGGCGGTTCTCATTGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAATAAAATT 766 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 718 GAGGCGGTTCTCATAGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAACAAAATT 777 Query 767 GAACAGGAACTCGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCAACAAAG 826 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 778 GAACAGGAACTCGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCTACAAAG 837 Query 827 AAATTTGAAAAGTTGATAACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTT 886 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 838 AAATTTGAAAAGTTGATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTC 897 Query 887 GGGCTATTCGCACAAGCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGA 946 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 GGGCTATTCGCACAAGCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGA 957 Query 947 CCATGGATCATTACACTGGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAAAAC 1006 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 958 CCATGGATCATTACACTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAGAAC 1017 Query 1007 CGTGCTCTGCGTGAGGAAGTCTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTG 1066 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1018 CGTGCTCTGCGTGAGGAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTG 1077 Query 1067 GATAATACGGCAATTATTGACCAGATTTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTT 1126 |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1078 GATAATACAGCAATTATCGACCAGATCTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTT 1137 Query 1127 GGTTACAACAATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCA 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 GGTTACAACAATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCA 1197 Query 1187 GCAGAGCTTTTAGAGAAGCTTCGTAGTGCATCCTGGGATGCGGCTGTTCAAGACATGGAA 1246 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1198 GCAGAGCTTTTAGAGAAGCTTCGTAGTGCATCTTGGGATGCGGCTGTTCAAGACATGGAA 1257 Query 1247 GACCTCAAGAGTTTCGCAAAGAACCAGGGTGCTGCAGAATCTGACAGTATGACTCATTGG 1306 ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||| Sbjct 1258 GACCTCAAGAGTTTCGCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTGACTCACTGG 1317 Query 1307 GACACCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAA 1366 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1318 GACACCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATATGATATTAATGAGGAAGAA 1377 Query 1367 CTACGTCCATACTTCTCACTGCCAAAGGTTATGGATGGACTTTTCA 1412 ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1378 CTACGTCCATACTTCTCACTGCCAAAGGTTATGGATG-ACTTTTCA 1422 Score = 789 bits (427), Expect = 0.0 Identities = 511/548 (93%), Gaps = 20/548 (4%) Strand=Plus/Plus Query 1975 TCAGTTGAAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATACGTACCAGGAGGACC 2034 ||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| | Sbjct 1420 TCA-TTGAAATTTGCTAGTGTGGATCTTGAGCTGCACACAAAATATGTACCAGGAGGAGC 1478 Query 2035 AGAGTCCATCTATGACGTAGATCAAAGGGTATCAGTAAAAACCCAAGTTATCCCTCCACT 2094 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1479 AGAGTCCATCTATGACGTAGATCAAAGGGTATCAGTGAAAACCCAAGTTATCCCTCCACT 1538 Query 2095 TCCTGAGGATAGATTTCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGG 2154 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1539 TCCTGAGGATAGATTCCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGG 1598 Query 2155 ATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCTGATGCATTTTCAGCATTTGAAGA 2214 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1599 ATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCAGATGCATTTTCAGCATTTGAAGA 1658 Query 2215 CGCTGGACTAGACGACATCAAGGCTGTTAAAGAAACAGGACAGAGATTCAGAAACACCAT 2274 |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 1659 CGCTGGACTAGATGACATCAAGGCTGTGAAAGAAACAGGACAGAGATTCAGAGACACCAT 1718 Query 2275 ACTTGCACTTGGAGGAGGGAA-AGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAG 2333 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1719 ACTTGCACTTGGAGGAGG-AAGAGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAG 1777 Query 2334 AACCTTCACCCGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTT 2393 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1778 AACCTTCACCAGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTT 1837 Query 2394 AACTCTTATATAATCCTCACAACATTTGGAAACTTTGA-AAGACATTTATA-A-GATGGA 2450 ||||||||||| | ||||||||||||| |||||| | || ||||||||| | |||| | Sbjct 1838 AACTCTTATAT--T--TCACAACATTTGGCAACTTT-ATAA-ACATTTATATAAGATGAA 1891 Query 2451 AAATCAACTTTTCTTTTTTAATATGCCAACCATTTACATCT---AA-TAC-A--TTGCAT 2503 ||| | ||||| |||||||||||| ||||||||||||||| || ||| | |||||| Sbjct 1892 AAAAGATCTTTT-TTTTTTAATATGGCAACCATTTACATCTCTCAACTACTACATTGCAT 1950 Query 2504 TGATTTCT 2511 |||||||| Sbjct 1951 TGATTTCT 1958 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94768529560 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5