BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G66310.1 Length=3740 Score E Sequences producing significant alignments: (Bits) Value Ahg496975 jgi|Araly1|496975|fgenesh2_kg.8__2791__AT5G66310.1 2939 0.0 Ahg485469 jgi|Araly1|485469|fgenesh2_kg.5__1461__AT3G51150.1 1419 0.0 Ahg929419 jgi|Araly1|929419|scaffold_301876.1 52.8 2e-05 > Ahg496975 jgi|Araly1|496975|fgenesh2_kg.8__2791__AT5G66310.1 Length=3362 Score = 2939 bits (1591), Expect = 0.0 Identities = 1826/1937 (94%), Gaps = 26/1937 (1%) Strand=Plus/Plus Query 360 AGATCGAACTTTCTACAGAAGAGGCTGTGATATATCATCTTCTTAAGTCCTCC-CCtc-t 417 ||||||||| ||||||||||| |||||||||| || |||||||||| |||||| || | | Sbjct 116 AGATCGAACATTCTACAGAAGCGGCTGTGATA-ATAATCTTCTTAACTCCTCCTCC-CAT 173 Query 418 tcttcttct-tcttctAAGGTAGGGTAGAAGATGACTACAGAAGATGATGATCAGATGCT 476 ||||||||| | |||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct 174 TCTTCTTCTCTGTTCTTAGGTGGGGTAGAAGATGACTACAGAAGATGATGATCAGATGTT 233 Query 477 AGGACCAAGCGGCACCCAGGAAAAGATCTATGTTTCTGTTCGTATGCGACCTTTAAACGA 536 ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct 234 AGGACCAAGCGGCACTGAGGAAAAGATTTATGTTTCTGTTCGTATGCGCCCTTTAAACGA 293 Query 537 CAAGGAAAAGTTTAGGAATGATGTCCCTGACTGGGAGTGCATCAACAATACTACCATCAT 596 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 294 CAAGGAAAAGTTTAGGAATGATGTCCCGGACTGGGAGTGCATCAACAATACTACCATCAT 353 Query 597 TTACAGGAGTCATCTTTCTATCTCCGAGCGTTCCATGTATCCTTCTGCTTACACATTTGA 656 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 354 TTACAGGAGCCATCTTTCTATCTCTGAGCGTTCCATGTATCCTTCTGCTTACACATTTGA 413 Query 657 CAGAGTGTTTAGCCCTGAGTGTTGTACAAGGCAGGTGTATGAACAAGGGGCAAAGGAAGT 716 |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 414 CAGAGTGTTTAGCCCTGATTGTTGTACGAGGCAGGTCTATGAACAAGGGGCAAAGGAAGT 473 Query 717 CGCTTTCTCTGTTGTCAGTGGCGTTAATGCTAGTGTATTCGCATATGGGCAAACAAGCAG 776 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 474 CGCTTTCTCCGTTGTCAGTGGCGTTAATGCTAGTGTATTTGCATATGGGCAAACAAGCAG 533 Query 777 TGGAAAGACGTACACTATGAGCGGAATTACTGACTGCGCCTTGGTTGATATATATGGCTA 836 ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 534 TGGAAAGACTTATACAATGAGCGGAATTACTGACTGCGCCTTGGTTGATATATATGGCTA 593 Query 837 CATTGACAAGCACAAGGAAAGAGAATTCATTCTTAAGTTCTCTGCTATGGAGATCTACAA 896 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 594 CATTGACAAGCACAAGGAAAGAGAATTCATTCTTAAGTTCTCTGCCATGGAGATCTACAA 653 Query 897 TGAGTCTGTAAGAGATCTCTTAAGTACAGATACTAGTCCACTCAGACTTTTAGATGACCC 956 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 654 TGAGTCTGTAAGAGATCTCTTAAGTACAGATACTAGTCCACTCAAACTTTTAGATGACCC 713 Query 957 TGAGAAAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTCTGCGAGACTGGAATCATTT 1016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 714 TGAGAAAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTCTGCGAGACTGGAATCATTT 773 Query 1017 CAAGGAGCTCCTATCTGTCTGCAAAGCACAAAGGCAAATTGGTGAGACAGCTCTAAATGA 1076 ||||||||| |||||||||||| |||| ||| |||| ||||| ||||||||||||||||| Sbjct 774 CAAGGAGCTTCTATCTGTCTGCGAAGCTCAACGGCAGATTGGAGAGACAGCTCTAAATGA 833 Query 1077 AGTTAGCTCCCGGTCTCATCAGATTTTGAGATTGACAGTAGAAAGCATAGCTCGTGAATT 1136 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 834 AGTTAGCTCCCGGTCTCATCAGATTTTGAGATTGACAGTTGAAAGCACAGCTCGTGAATT 893 Query 1137 TTCTACCAATGATAAGTTTAGTACTCTAACAGCGACAGTGAACTTCATTGATCTTGCTGG 1196 ||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct 894 TTCCACCAATGATAAGTTTAGTACACTAACAGCAACAGTGAACTTTATTGATCTTGCTGG 953 Query 1197 AAGTGAACGTGCGTCTCAATCATTATCAGCCGGCACAAGGTTAAAAGAAGGTTGTCATAT 1256 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 954 AAGTGAACGTGCATCTCAATCATTATCAGCCGGTACAAGGTTGAAAGAAGGTTGTCATAT 1013 Query 1257 AAACCGAAGTTTGTTAACACTGGGAACTGTGATCCGTAAGCTAAGTAAAGAAAAAACTGG 1316 |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct 1014 AAACCGAAGTTTGTTAACGCTGGGAACTGTGATACGTAAGCTAAGTAAAGGAAAAACTGG 1073 Query 1317 GCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTCTTCTTTGGGAGGAAA 1376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1074 GCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTCTTCTTTGGGAGGAAA 1133 Query 1377 TGCAAGAACTGCCATAATTTGCACTATGAGTCCTGCGAGAATCCATGTTGAACAATCAAG 1436 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1134 TGCAAGAACTGCCATAATTTGCACTATGAGTCCTGCGAGAATCCATGTTGAGCAGTCAAG 1193 Query 1437 AAACACACTGTTATTTGCAAGCTGCGCAAAGGAGGTGACAACAAATGCACAAGTCAATGT 1496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1194 AAACACACTGTTATTTGCAAGCTGCGCAAAGGAGGTGACAACAAATGCACAAGTCAATCT 1253 Query 1497 TGTCATGTCTGATAAAGCTTTAGTAAAGCACTTGCAGAGGGAGTTGGCTAAACTGGAAAG 1556 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1254 TGTCATGTCTGATAAAGCTTTAGTAAAACACTTGCAGAGGGAGTTGGCTAAACTGGAAAG 1313 Query 1557 TGAGTTGAGAAGCCCTAGTCAGGCTTCAATTGTTTCTGACACAACTGCATTACTGACGGA 1616 ||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||| Sbjct 1314 GGAGTTGAGAAGCCCTGGTCAGCCTTCGGTTGCTTCTGACACAACTGCATTACTGACGGA 1373 Query 1617 GAAAGACCTTGAGGTTGAAAAGCTTAAGAAAGAGGTATTCCAACTAGCACAACAACTAGA 1676 ||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||| Sbjct 1374 GAAAGACCTCGAGGTTGAAAAGCTAAAGAAAGAGGTACTCCAACTAGCACAACAGCTAGA 1433 Query 1677 GCAAGCTCGTTCCGAGATTAAGGATCTTCGACGAATGGTTGAAGAAGa-aaaaaaCCAAG 1735 |||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| || Sbjct 1434 GCAAGCTCGTTCCGAGATTATGGATCTTCGAAGAATGGTTGAAGAAGAGAAAAAACC-AG 1492 Query 1736 AAAAAGAGACGCTATCAACAGAAACAGAAGGGTTAAATGTTCTGATGGAACATCAATACC 1795 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1493 AAAAAGAAACGCTATCAACAGAAACAGAAGGGTTAAATGTTCTGTTGGAACATCAATACC 1552 Query 1796 CCAAGCTGCGGGTGCGCAGGACATGGGACTCTGAGAATACAACACCACTGAGCCCTATAT 1855 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1553 CCAAGCTGCGAGTGCGCAGTACATGGGACTCTGAGAATACAACACCACTGAGCCCTATAT 1612 Query 1856 CAGCTCACCGTTCCAGTATATCTCCACGATCAACTGAATATAGTTATGAAGAGAATGTCT 1915 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1613 CAGCTCACCGCTCCAGTATATCTCCACGATCAACTGAATATAGTTATGAAGAGAATGTCT 1672 Query 1916 TTCAGCTATCAGATTTCAGGATAGATTCTGCATCAAGTAGTCCGCAACAGCTTGCGTTTG 1975 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1673 TTCAGCTATCAGATTTCAGGATAGATTCTGCATCAAGTAGTCCGCAACAGCTTGCGTTTG 1732 Query 1976 TAACTCCTTTCCTTAAGGTTCCACTTGATGATATTCACGTGACAGATACTGTAGACCAAT 2035 |||||||||||||| | | | || | |||| |||||| ||||||||||||| Sbjct 1733 TAACTCCTTTCCTT--G-----A-T--AT--T---CACGGGACAGAAACTGTAGACCAAT 1777 Query 2036 CTCATGTTCACAAAGAGGAAGCTATAGAAGAACCTCATGTTCAGGAGGAACGGTTTTATG 2095 |||||||||||| ||||||| || ||| ||||||||||||||||||| |||||||||| Sbjct 1778 CTCATGTTCACATAGAGGAAATTACAGATCAACCTCATGTTCAGGAGGAGCGGTTTTATG 1837 Query 2096 AAATGGCTGAACACACTGACGGAAATTCTGAGGATAACTGCAGGGAAGTTCGGTGCATAG 2155 ||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1838 AAATGGCTGAACAGACTGACGAAAATTCTGAGGATAACTGCAGGGAAGTTCGCTGCATAG 1897 Query 2156 AAACAGAGAAGTCAGATATTAGTATAGGTCCAGTGGAAAATATGCCGGAGAGCAGTCCAG 2215 |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 1898 AAACGGAGAAGTCAGATATTGGTATAGGTCCAGAGGAAAATATGCCGGAGAGCAGTCCAG 1957 Query 2216 ACAAATACGAGGCTGT-AACTGCAGAAGAACCAGTATCTGTGACAGAGCCAAAGAACTTA 2274 |||||||||| ||||| || || |||||||||||||| |||||||||| ||||||||||| Sbjct 1958 ACAAATACGAAGCTGTGAA-TGAAGAAGAACCAGTATGTGTGACAGAGTCAAAGAACTTA 2016 Query 2275 CAAC-ATCCGACAGAAG 2290 | || | || ||||||| Sbjct 2017 CGACCACCC-ACAGAAG 2032 Score = 2091 bits (1132), Expect = 0.0 Identities = 1289/1363 (95%), Gaps = 17/1363 (1%) Strand=Plus/Plus Query 2286 AGAAGAAGCAGTATGTGTGACAGAGACAAAGAACTTAC-AACATCCCACAGAAGCTGAAA 2344 ||||||| ||||||||||||||||| |||||||||||| | || |||||||||||||||| Sbjct 1980 AGAAGAACCAGTATGTGTGACAGAGTCAAAGAACTTACGACCA-CCCACAGAAGCTGAAA 2038 Query 2345 ACgaagaagaagaagaagaagaaagaGTAAAGGAAGTCAGTGGTGCTTCTCCTGAACCAA 2404 || | ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2039 AC--------A-AAGAAGAAGAAAGAGTAAAGGAAGTCAGTGGTGCTTCTCCTCAACCAA 2089 Query 2405 AACAAGAAAGCAACCTCACAAAAAATCCTGCATTGTGTGATTTGGAATGTTCACCTGAT- 2463 ||||||||| ||||||| |||||| |||| |||| |||||||| ||||||||||||| | Sbjct 2090 AACAAGAAACCAACCTCGCAAAAACTCCTCCATTCTGTGATTTCGAATGTTCACCTG-TG 2148 Query 2464 GAGTTTGATACAA-GCATGTCTAACCTGAGTAGAATCTCAACACCTCCAGCCCTTATCAC 2522 |||||||||| || |||||||||||||||| |||||| |||| |||||| | |||||||| Sbjct 2149 GAGTTTGATA-AAGGCATGTCTAACCTGAGAAGAATCCCAACGCCTCCAACACTTATCAC 2207 Query 2523 TCCCTCTCCTGAAAAGCCTTTCTCTTGGATTATGGAGAGAGATTCACAACTT-TTCAGAG 2581 |||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| Sbjct 2208 TCCCTCTCCTGAAAAGCCTTTCTCTTGGCTTATGGAGAGAGATTCACAA-TTGTTCAGAG 2266 Query 2582 GAATGAAGCTGACTAGAAGTCGAAGCTGCCGACCAAGCTTATTATCGAGCCCTTCCTCCT 2641 | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 2267 GCATGAAGCTGACTAGAAGTCGAAGCTGCCGGCCAAGCTTATTATCGAGCTCTTCCTCCT 2326 Query 2642 CTTGGTTAGAGAAAGATGCTGATACACCGCCAAGCTGGTACGACAAAGAATTTATCAAAA 2701 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2327 CTTGGTTAGAGAAAGATGCTGATACACCGCCAAGCTGGTACGACAAAGAATTTGTCAAAT 2386 Query 2702 CAGCTGAGAGAAACTTGACAATGTGCGACATCAAGAACCAGAGATTGTTGCAGGATGAGT 2761 ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2387 CAGCTGAGACAAACCTGACAATGTGCGACATCAAGAACCAGAGGTTGTTGCAGGATGAGT 2446 Query 2762 TTAGTGGGAGGAGCATGCCAACAACTTGGTTCGAGAGAAGCTTGAGTGACACTCAAACGG 2821 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2447 TTAGCGGGAGGAGCATGCCAACAACTTGGTTCGAGAGAAACTTGAGTGACACTCAAACGG 2506 Query 2822 TGGATGCTGCTTCACATGGTGTCAGCAACGAAATGTCGCCAAATGAATCACCATTTCGGC 2881 |||||||||||||||||||||||| || ||||||||||||||||| ||||| | ||||| Sbjct 2507 CGGATGCTGCTTCACATGGTGTCAGTAATGAAATGTCGCCAAATGAGTCACCGTCTCGGC 2566 Query 2882 CATCTGATGCTTCTGTGTTTGAGCTCCAGACAAGTGGTAGAGCTTCAATAAGCCAGGACA 2941 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2567 CATCTGATGCTTCTGTGTTTGAGCTCCAGACAAGTGGTAGAGCTTCAATAAGCCAGGACA 2626 Query 2942 GAACAGAGGAGACTGCTGCTCAAAAAGACAAGCAAATCATTCATCGATCGATGGAGGAAA 3001 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2627 GAACAGAGGAGACTGGTGCTCAAAAAGACAAGCAAATCATTCATCGCTCGATGGAGGAAA 2686 Query 3002 GGGAACAGAAGTTCTTGGCCTCGAATTCAACGAAGAGTTTCAAGGACGCAGCAATGGACC 3061 |||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 2687 TGGAACAGAAGTTCTTGTCCTTGAGTTCAACGAAGAGTTTCAAGGACGCAGCAATGGACC 2746 Query 3062 CAATACAAGACTACTTAGACACGGCCTTGAATTGGCCAGTGGAGTTCAAGAGGCTACAGA 3121 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 2747 CAATACAAGACTACTTAGACACGCCCTTGAATTGGCCGGTGGAGTTCAAGAGGCTACAGA 2806 Query 3122 GGGAGATAATAGAGCTATGGCACGTGTGTAAAGTCTCAATGGCACACAGAAGCTACTTCT 3181 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 2807 GGGAGATAATAGAGCTGTGGCACGTGTGTAAAGTCTCTATGGCACACAGAAGCTACTTCT 2866 Query 3182 TCCTTCTGTTCAGAGGAGATCAGAAAGATTGCTTGTACTTGGAGGTAGAGCTCCGTAGAC 3241 |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2867 TCCTTCTGTTTAGTGGAGATCAGAAAGATTGCCTGTACTTGGAGGTAGAGCTCCGTAGAC 2926 Query 3242 TTAAGTACATCAGAGAATCTTTCGCCCAAAATAGCAACGATGGCAACAATATGACCCTAA 3301 |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| Sbjct 2927 TTAAGTACATCAGAGAATCTTTTGCCGAAAATAGCAACGATGGCCACAATATGACCCTAA 2986 Query 3302 TCTCCTGCACGAGGGCATTGACGAGGGAGAGGTATAAGCTGAGCAAGCTGATGCAGAGGA 3361 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2987 TCTCCTGCACGAGGGCGTTGACGAGGGAGAGGTATAAGCTGAGCAAGCTGATGCAGAGGA 3046 Query 3362 AACTGTCGAAAGAAGAGAGAGAGAACTTGTTCTTGAGATGGGGCATTGGGCTCAACACGA 3421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3047 AACTGTCGAAAGAAGAGAGAGAGAACTTGTTCTTGAGATGGGGCATTGGGCTCAACACGA 3106 Query 3422 ATCACAGACGGGTCCAGCTGGCGCGTCGTCTCTGGTCGGATTACAAAGACATGGGTCATG 3481 ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct 3107 GTCACAGACGGGTCCAGCTGGCACACCGGCTCTGGTCGGATTACAAAGACATGGGTCATG 3166 Query 3482 TCCGAGAGAGCGCCTCCCTCGTTGGTAAGCTCAATGGGTTCGTGGACATGAAGTTGACTT 3541 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3167 TCCGAGAGAGCGCTTCCCTCGTTGGTAAGCTCAATGGGTTTGTGGACATGAAGTTGACTT 3226 Query 3542 CCACAGAGATGTTTGGCGTCAACTATGCTTTCAGACCACCACGTCCCAAGAAATCTAGTC 3601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3227 CCACAGAGATGTTTGGCGTCAACTATGCTTTCAGACCACCTCGTCCCAAGAAATCTAGTC 3286 Query 3602 TTTGGAAACGCAGCGTTTTGTCCCTCTCCTTTTTGTAACTACT 3644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3287 TTTGGAAACGCAGCGTTTTGTCCCTCTCCTTTTTGTAACTACT 3329 > Ahg485469 jgi|Araly1|485469|fgenesh2_kg.5__1461__AT3G51150.1 Length=3470 Score = 1419 bits (768), Expect = 0.0 Identities = 1296/1547 (84%), Gaps = 52/1547 (3%) Strand=Plus/Plus Query 466 GATCAGATGCTAGGACCAAGCGGCACCCAGGAAAAGATCTATGTTTCTGTTCGTATGCGA 525 |||||||||| ||| || || || | | || ||||| | ||||||||||||| || | Sbjct 355 GATCAGATGCAAGGGCCGAGTGGTAGGGAAGAGAAGATTTTTGTTTCTGTTCGTCTGAGG 414 Query 526 CCTTTAAACGACAAGGAAAAGTTTAGGAATGATGTCCCTGACTGGGAGTGCATCAACAAT 585 || ||||| | || |||| | ||||||||||| | || |||||||| ||||| || Sbjct 415 CCATTAAATGTGAAAGAAAGGGCAAGGAATGATGTGGCAGATTGGGAGTGTATCAATGAT 474 Query 586 -ACTACCATCATTTACAGGAGTCATCTTTCTATCTCCGAGCGTTCCATGTATCCTTCTGC 644 | || |||| |||||||| ||||| ||||| || |||||||||||||| || |||| Sbjct 475 GA-AACGGTCATATACAGGAGCCATCTCTCTATATCAGAGCGTTCCATGTACCCCACTGC 533 Query 645 TTACACATTTGACAGAGTGTTTAGCCCTGAGTGTTGTACAAGGCAGGTGTATGAACAAGG 704 ||||||||||||||||||||| |||||||||||| ||| ||| |||||||||| ||||| Sbjct 534 GTACACATTTGACAGAGTGTTTGGCCCTGAGTGTTCTACCAGGGAGGTGTATGATCAAGG 593 Query 705 GGCAAAGGAAGTCGCTTTCTCTGTTGTCAGTGGCGTTAATGCTAGTGTATTCGCATATGG 764 ||| |||||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| Sbjct 594 GGCTAAGGAAGTGGCTCTCTCTGTTGTCAGTGGGGTTCATGCTAGTGTCTTTGCATATGG 653 Query 765 GCAAACAAGCAGTGGAAAGACGTACACTATGAGCGGAATTACTGACTGCGCCTTGGTTGA 824 ||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||| || Sbjct 654 GCAAACAAGCAGTGGAAAGACATACACTATGAGTGGAATTACTGATTACGCCTTGGCCGA 713 Query 825 TATATATGGCTACATTGACAAGCACAAGGAAAGAGAATTCATTCTT-AAGTTCTCTGCTA 883 |||||||| |||||||| |||||||| ||||||||||||||| || |||||||| || | Sbjct 714 TATATATGATTACATTGAGAAGCACAATGAAAGAGAATTCATT-TTGAAGTTCTCAGCCA 772 Query 884 TGGAGATCTACAATGAGTCTGTAAGAGATCTCTTAAGTACAGATACTAGTCCACTCAGAC 943 |||||||||| ||||||||||||||||| ||||| |||||||| | |||||||||||||| Sbjct 773 TGGAGATCTATAATGAGTCTGTAAGAGACCTCTTGAGTACAGACATTAGTCCACTCAGAC 832 Query 944 TTTTAGATGACCCTGAGAAAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTCTGCGAG 1003 || ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| | Sbjct 833 TTCTAGATGATCCTGAGAAAGGAACAGTTGTTGAGAAACTCACGGAGGAAACTCTGCGGG 892 Query 1004 ACTGGAATCATTTCAAGGAGCTCCTATCTGTCTGCAAAGCACAAAGGCAAATTGGTGAGA 1063 ||||||||||||| |||||||| |||| |||| | ||| ||| | || ||||| |||| Sbjct 893 ACTGGAATCATTTTAAGGAGCTTTTATCAATCTGTATAGCTCAACGACATATTGGAGAGA 952 Query 1064 CAGCTCTAAATGAAGTTAGCTCCCGGTCTCATCAGATTTTGAGATTGACAGTAGAAAGCA 1123 ||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| Sbjct 953 CAGCTTTAAATGAAGTTAGCTCCCGCTCTCATCAGATTCTGAGATTGACAGTTGAAAGCA 1012 Query 1124 TAGCTCGTGAAT-TTTCTACCAATGATAAGTTTAGTACTCTAACAGCGACAGTGAACTTC 1182 ||| ||||||| ||| | || ||||| ||||||||||| |||||||||||||| ||| Sbjct 1013 CAGCACGTGAATATTT-GGCGAAGGATAAATTTAGTACTCTCACAGCGACAGTGAATTTC 1071 Query 1183 ATTGATCTTGCTGGAAGTGAACGTGCGTCTCAATCATTATCAGCCGGCACAAGGTTAAAA 1242 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct 1072 ATTGATCTTGCTGGAAGTGAACGTGCATCTCAATCATTATCAGCCAGCACAAGGTTGAAA 1131 Query 1243 GAAGGTTGTCATATAAACCGAAGTTTGTTAACACTGGGAACTGTGATCCGTAAGCTAAGT 1302 |||||||||||||||||||||||||| ||||||| |||||||| || || ||||||||| Sbjct 1132 GAAGGTTGTCATATAAACCGAAGTTTACTAACACTAGGAACTGTCATTCGAAAGCTAAGT 1191 Query 1303 AAA-GAAAAAACTGGGCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTC 1361 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 AAAGGAAAAAA-TGGGCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTC 1250 Query 1362 TTCTTTGGGAGGAAATGCAAGAACTGCCATAATTTGCACTA-TGAGTCCTGCGAGAATCC 1420 ||| |||||||||||||| ||||| |||||||| ||||| | | |||||||| ||||| | Sbjct 1251 TTCCTTGGGAGGAAATGCCAGAACAGCCATAATCTGCAC-ACTAAGTCCTGCAAGAATAC 1309 Query 1421 ATGTTGAACAATCAAGAAACACACTGTTATTTGCAAGCTGCGCAAAGGAGGTGACAACAA 1480 ||||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||||||||| Sbjct 1310 ATGTTGAGCAATCTAGAAACACATTGTTATTTGCGAGCTGTGCAAAGGAGGTGACAACAA 1369 Query 1481 ATGCACAAGTCAATGTTGTCATGTCTGATAAAGCTTTAGT-AAAGCACTTGCAGAGGGAG 1539 ||||||||||||| || |||||||||||||||||| | || ||| || || ||||| ||| Sbjct 1370 ATGCACAAGTCAACGTCGTCATGTCTGATAAAGCTCTGGTTAAA-CATTTACAGAGAGAG 1428 Query 1540 TTGGCTAAACTGGAAAGTGAGTTGAGAAGCCCTAGTCAGGCT-TCAATTGTTTCTGACAC 1598 ||||||||| |||| ||||||||||| |||||| |||| ||| | |||| |||||||| Sbjct 1429 TTGGCTAAATTGGAGAGTGAGTTGAGCAGCCCTCGTCAAGCTCTGG-TTGTGTCTGACAC 1487 Query 1599 AACTGCATTACTGACGGAGAAAGACCTTGAGGTTGAAAAGCTTAAGAAAGAGGTATTCCA 1658 |||||||||||||| ||| |||||||| | | |||||||| || |||||||||||||| Sbjct 1488 AACTGCATTACTGAAGGATAAAGACCTCCAAATCGAAAAGCTAAATAAAGAGGTATTCCA 1547 Query 1659 ACTAGCACAACAACTAGAGCAAG-CTCGTTC-CGAGATTAAGGATCTTCGAC-GAATGGT 1715 |||||||||| || ||||| | | || ||| || |||| ||||||||| || || | | Sbjct 1548 ACTAGCACAAGAATTAGAG-AGGGCTTATTCTCG-GATTGAGGATCTTCAACAGATTA-T 1604 Query 1716 TGAAGAAGaaaaaaaCCAAGAAAAAGAGACGCTATCAACAGA---A-A-CAGA-AGGGTT 1769 |||||||| ||| ||||||||| |||||||||| | | |||| | Sbjct 1605 TGAAGAAGGC-----CCAC-AAAAAGAGATATTATCAACAGACTCAGAACAGACAAACAC 1658 Query 1770 AAATGTTCTGATGGAACATCAATACCCCAAGCTGCGGGTGCGCAGGACATGGGA--CTCT 1827 |||||| | ||| || ||| |||||||||||||| ||||| || ||||||| |||| Sbjct 1659 AAATGTGGTTCTGGGACGTCAGTACCCCAAGCTGCGTGTGCGTAGTTCATGGGAGTCTCT 1718 Query 1828 GAGAATACAACACCACTGAGCCCTATATCAGCTCAC-CGTTCCAGTAT-ATCTCC--ACG 1883 | |||| ||||||| |||||| ||||||| || ||| ||| ||| || ||| || Sbjct 1719 -A-AATATAACACCAGAAAGCCCTCTATCAGCGCAAGCGT-CCATTATGATTTCCCCACA 1775 Query 1884 ATCAACTGAATATAGTTATGAAGAGAATGTCTTTC-AGCTAT-CAGA-TTTCAGGATAGA 1940 |||||| ||| || ||| ||| |||||||| |||| |||| | |||| ||| ||| || | Sbjct 1776 ATCAACCGAACATGGTTCTGACGAGAATGT-TTTCCAGCT-TGCAGACTTT-AGGTTAAA 1832 Query 1941 TTCTGCAT-CAAGTAGTCC-GC--AACAGCTTGCGTTTGTAACTCCT 1983 ||| | | |||||||||| || |||| ||| |||||||||||||| Sbjct 1833 TTCGGG-TGCAAGTAGTCCAGCCCAACATCTTACGTTTGTAACTCCT 1878 Score = 586 bits (317), Expect = 4e-166 Identities = 1063/1399 (76%), Gaps = 147/1399 (11%) Strand=Plus/Plus Query 2306 CAGAGACAAAGAAC-TTACAACATCCCACAGAAGCTGAAAACgaagaagaa-gaagaaga 2363 ||||| |||||||| | | | || || |||||| ||| || |||||| || |||||||| Sbjct 2063 CAGAGTCAAAGAACGTAAGACCA-CCAACAGAAACTG--AA-GAAGAA-AAGGAAGAAGA 2117 Query 2364 agaaagaGTAAAGGAAGTCAGTGGTG-CT-TCTCCTGAACCAAAACAAG-AAAG-CAACC 2419 ||||||||| |||||||||||| ||| || | ||| |||| ||| || |||| ||| Sbjct 2118 AGAAAGAGTGAAGGAAGTCAGTAGTGTCTCTATCC--AACC-AAAGGAGAAAAGTGGACC 2174 Query 2420 TCACAAAAAATC-CTGCATTG-TGTGATTTGGAATGTTCACCTGATGAGT--T-TGATAC 2474 | ||| || || || | |||| |||| | || | |||| || | | | | | Sbjct 2175 -GA-TCAAAGTCTCTCCA-CGCTGTGTTTTGTCA-CTT-A-CTGACGAATCATATCCT-C 2227 Query 2475 A--AG-CATGTCTAACCTGAGTAGA-ATCTCAACACCTCCAGCCCTTATCACTCCCTCTC 2530 | || | | |||||||| || ||| | | |||||| || || || ||||||| |||| Sbjct 2228 ATGAGTC-T-TCTAACCTCAGAAGAGA-CCCAACACATCAAGATTTTGTCACTCCATCTC 2284 Query 2531 CTGAAAAGCCTTTC-T-CTTGG-ATTATGGAGAGAGATTCAC-AACTTTTCAGAGGAATG 2586 |||||||||| || | ||||| | | | |||||| |||| | ||| | |||| ||| Sbjct 2285 CTGAAAAGCC--TCATGCTTGGCA-TCTTGAGAGAAATTCGCAAACAGCT-GGAGGCATG 2340 Query 2587 AAGCTGACTAGAAGTCGAAGCTGCCGACCAAGCTTAT-TATCGAGCCCTTCCTCCTCT-T 2644 | | |||||||| ||||||||| || ||||||| | |||| ||| |||||| ||| | Sbjct 2341 GGGTTTACTAGAAGCCGAAGCTGCGGAGCAAGCTT-TGTATCAAGCTCTTCCTTTTCTAT 2399 Query 2645 GGT-TAGAGAAAGATGCTGATACACCGCCAAGCTGGTACGACAAAGAATTTATCAAAACA 2703 || | |||| ||||||| | ||||| ||||||||||| | || | || ||| | Sbjct 2400 -GTCT-GAGAGAGATGCTAACACACCACCAAGCTGGTA--TC--AG-A---AT-GAAAGA 2448 Query 2704 GCTGAGAGAAACTTGACAA-TGTGCGACATCAAGA-ACCAGAGATTGTTGCAGGATGAGT 2761 |||||||| ||| ||| || || | ||| ||||| ||| |||| || || | | Sbjct 2449 GCTGAGAGCAACCTGA-AACCGTACAACAACAAGAGGCCA-CCATTG--CCA-AATCA-T 2502 Query 2762 -TTAGTGGGAGGAGCATGCCAACAACTTGGTTCGAGAGAAG-CTTGAGTGACACTCAAAC 2819 |||| ||| |||||||||| ||||||||||||||| ||| ||| | | | Sbjct 2503 ATTAGCCGGATGAGCATGCCAGCAACTTGGTTCGAGA-AAGACTT---T-----T--TA- 2550 Query 2820 GGTGGATGCTGCTTCACATGGTGTCAGCAACGAAATGTCGCCAAATGAATCACCA--TTT 2877 | ||| || || || | || | || || | | || ||||||| |||| || ||| Sbjct 2551 GATGG-TGGTG-TT-A-AT-AAG--AG-AAAGTCA--TCACCAAATGGATCA-CAGGTTT 2599 Query 2878 CGGCCATCT-GATGCTTC-TGTGTTTG-AGCTCCAGACAAGTGGTAGAGCTTCAAT-AAG 2933 | || ||| || | || | ||| || | | |||||||||||||||||||| ||| || Sbjct 2600 C-TCCCTCTAAAT-C-TCTTCTGTATGCA-CGCCAGACAAGTGGTAGAGCTTTAATCAA- 2654 Query 2934 CCAGGACAGAA-CAGAGGAGACTGCTGCTCAAAAAGACAAGCAAATCATTCATCGATCGA 2992 ||| ||| ||| || ||||||| | |||||| ||||||| ||||||||| | ||||| Sbjct 2655 CCAAGAC-GAAGGTGAAGAGACTGTTCCTCAAAGGGACAAGCGAATCATTCACCTATCGA 2713 Query 2993 TGGAGGAAAGGGAACAGAAGTTCTTGGCCTCGAA-TTCAACGAAGAGTTTCAAGGACGCA 3051 ||||||| | || || |||||||||| ||| || || | ||||||||||||||||| Sbjct 2714 TGGAGGAGATAGAGCAAAAGTTCTTGG-CTCTAAGATCGTCAAAGAGTTTCAAGGACGCT 2772 Query 3052 GCAATGGACCCAATACAAGACTACTTAGA-CACGGCC-TTGAATTGGCCAG-TGGAGTTC 3108 || | ||||| ||||||||||| ||| | || ||| ||||| ||||| | |||| ||| Sbjct 2773 GCGGTTGACCCCATACAAGACTATTTA-ACCA-TGCCATTGAACTGGCC-GTTGGAATTC 2829 Query 3109 AAGAGGCTAC-AGAGGGAGATAATAGAGCTATGGCACG-TGTGTAAAGTCTCAATGGCAC 3166 ||||| || | ||| ||||||||||||||||||||| | | || || || || || ||| Sbjct 2830 AAGAGACT-CGAGATGGAGATAATAGAGCTATGGCATGCT-TGCAACGTTTCCTTGTCAC 2887 Query 3167 ACAGAAGCTACTTCTTCCTTCTGTTCAGAGGAGATCAGAAAGATTGCTTGTACTTGGAGG 3226 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 2888 ACAGAAGTTACTTCTTCCTTCTCTTCAGAGGAGATCAGAAAGATTGCTTGTACATGGAGG 2947 Query 3227 TAGAGCTCCGTAGACTTAAGTACATCAGAG-AATCTTTCGCCCAAAATAGC-AA-CGAT- 3282 | || |||||||| || ||||||||||||| || |||| |||| |||| | || | || Sbjct 2948 TCGAACTCCGTAGGCTCAAGTACATCAGAGAAACCTTT-ACCCACAATAACAAAGCTATA 3006 Query 3283 GGCAACAATATG-AC-C---C-T-AATCTCCTGCAC-GAGGGCATT-GACGAGGGAGAGG 3333 | ||| | | || | | | ||| ||| || | |||||| || || ||||||||| Sbjct 3007 GAAAAC-GGACGCACTCTTACATCAATGTCCAGC-CTGAGGGCGTTAAAC-AGGGAGAGG 3063 Query 3334 TATAAGCTGAG-CAAGCTGATGCAGAGGAAACTGTCGAAAGAAGAGAGAGAGAACTTGTT 3392 |||||||| || | || ||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 3064 TATAAGCTAAGTC-AGATGATGCAGAAGAAACTGACGAAAGAAGAGAGAGAGAACTTGTT 3122 Query 3393 CTTGAGATGGGGCATTGGGCTCAACACGAATCACAGACGGGTCCAGCTGGCGCGTCGTCT 3452 ||||||||||||||||||||| ||||| || ||||| ||| |||||||||||| |||||| Sbjct 3123 CTTGAGATGGGGCATTGGGCTGAACACAAAGCACAGGCGGCTCCAGCTGGCGCATCGTCT 3182 Query 3453 CTGGTCGGATTA-CAAAGACATGGGTCATGTCCGAGAGAGCGCCTCCCTCGTTGGTAAGC 3511 |||||| || | ||||||||||| ||||||||||||||||||||| | || || |||| Sbjct 3183 CTGGTCAGAA-AGCAAAGACATGGATCATGTCCGAGAGAGCGCCTCAGTTGTGGGAAAGC 3241 Query 3512 TCAATGGG-TTCGTGGACATGAAGTTGACTTCCACAG-AGATGTTTGGCGTCAACTA-TG 3568 ||| |||| |||||||||||| | ||| | |||| || | ||||||||| |||||| | Sbjct 3242 TCA-TGGGGTTCGTGGACATGGATTTGGCGTCCA-AGGAAATGTTTGGCCTCAACTTCT- 3298 Query 3569 CT-TTCAGACCACCACGTCCCAAGAAATCTAGTCTTTGGAAACGCAGCGTTTTGTCCCTC 3627 || || ||||| || |||||||||||||||| || |||||||||||||||||||| || Sbjct 3299 CTCTT-AGACC-CC--GTCCCAAGAAATCTAGCCTATGGAAACGCAGCGTTTTGTCACTA 3354 Query 3628 TCCTTTTTGTAACTA-CTG 3645 ||| ||||||| || ||| Sbjct 3355 TCCAATTTGTAATTAACTG 3373 > Ahg929419 jgi|Araly1|929419|scaffold_301876.1 Length=2110 Score = 52.8 bits (28), Expect = 2e-05 Identities = 28/28 (100%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1180 TTCATTGATCTTGCTGGAAGTGAACGTG 1207 |||||||||||||||||||||||||||| Sbjct 1216 TTCATTGATCTTGCTGGAAGTGAACGTG 1243 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 141307768549 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5