BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G66760.1 Length=2335 Score E Sequences producing significant alignments: (Bits) Value Ahg496924 jgi|Araly1|496924|fgenesh2_kg.8__2740__AT5G66760.1 3563 0.0 Ahg480752 jgi|Araly1|480752|fgenesh2_kg.3__3453__AT2G18450.1 1496 0.0 > Ahg496924 jgi|Araly1|496924|fgenesh2_kg.8__2740__AT5G66760.1 Length=2268 Score = 3563 bits (1929), Expect = 0.0 Identities = 2175/2288 (95%), Gaps = 40/2288 (2%) Strand=Plus/Plus Query 1 CCGTTCGCGTCTTCCTCTTAAAGGAAACCTCCTCTACG--CGA--AATTCGTATTCTCTC 56 ||||||||||||||||||| |||| ||| ||||||||| | ||||||||||||||| Sbjct 1 CCGTTCGCGTCTTCCTCTTTAAGGGAACTTCCTCTACGAAAAACTAATTCGTATTCTCTC 60 Query 57 ATTTCTTCTACGGAGATTTGCATCGAAGAAACTGACTCGCTTGTGGAATCAACAACAAGA 116 |||||||||| |||||||||||||||||||||||| |||||||||||| || ||||| || Sbjct 61 ATTTCTTCTAAGGAGATTTGCATCGAAGAAACTGATTCGCTTGTGGAACCATCAACACGA 120 Query 117 CGATGTGGCGCTGCGTCTCTCGTGGCTTTCGAGCTCCTGCTTCAAAGACCTCTTCACTCT 176 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 121 AGATGTGGCGCTGCGTCTCTCGTGGCTTTCGAGCTCCTTCTTCAAAGACCTCTTCACTCT 180 Query 177 TTGATGGCGTCTCTGGATCTCGCTTTTCCAGATTCTTCTCCACTGGTTCTACCGATACGA 236 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 181 TTGATGGCGTCTCTGGATCTCGCTTTTCCAGATTCTTCTCCACCGGTTCTACCGATACGA 240 Query 237 GATCCTCTTATACGATAGTGGATCACACTTATGATGCGGTTGTGGTGGGAGCTGGTGGTG 296 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 241 GATCCTCTTATACGATAGTGGATCACACCTATGATGCGGTTGTGGTGGGAGCTGGTGGTG 300 Query 297 CTGGTCTTAGGGCGGCGATTGGGTTATCGGAGCATGGCTTTAACACCGCTTGCATTACTA 356 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 301 CTGGACTTAGGGCGGCGATTGGGTTATCGGAGCATGGTTTTAACACCGCTTGCATTACTA 360 Query 357 AGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 AGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGG 420 Query 417 GAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACT 480 Query 477 GGCTAGGTGATCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCAAAAGCAGTCATTG 536 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | Sbjct 481 GGCTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCGGTCATCG 540 Query 537 AACTTGAGAATTATGGGCTGCCTTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AACTTGAGAATTATGGGCTGCCTTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 600 Query 597 CATTTGGTGGTCAGAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGTG 656 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CATTTGGTGGTCAAAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGTG 660 Query 657 CTGCGGATAGGACTGGTCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCATA 716 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 661 CTGCGGATCGGACTGGGCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCACA 720 Query 717 ACACACAGTTCTTTGTTGAATACTTCGCCTTGGATCTGCTCATGGCTAGTGATGGCAGTT 776 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 721 ACACACAGTTCTTTGTTGAATACTTCGCCTTGGATTTGCTTATGGCTAGTGATGGCAGTT 780 Query 777 GCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGTTCTTCTC 836 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 781 GCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGCTCTTCAC 840 Query 837 AAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGCACATA 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 AAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGCACATA 900 Query 897 CATGCACAGGGGATGGAAATGCAATGGTTGCACGGGCCGGTCTTCCACTGCAGGACTTGG 956 |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| | Sbjct 901 CATGCACAGGAGATGGAAATGCCATGGTTGCACGGGCCGGTCTTCCATTGCAGGACTTAG 960 Query 957 AGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCCGGATGTCTCATCACCGAAGGAT 1016 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 961 AGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCTGGATGTCTCATCACTGAAGGAT 1020 Query 1017 CTCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGAACGTTTTATGGAACGATATG 1076 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1021 CTCGAGGTGAAGGAGGTATCCTTAGAAACAGTGAAGGTGAACGTTTTATGGAGCGATATG 1080 Query 1077 CTCCTACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGACTATGGAAA 1136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CTCCTACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGACTATGGAAA 1140 Query 1137 TCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATCTGAATCATC 1196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATCTGAATCATC 1200 Query 1197 TTCCTCCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCTGCCATCTTTG 1256 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 TTCCTCCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCTGCCATCTTTG 1260 Query 1257 CTGGTGTTGATGTTACCAAAGAGCCAATTCCTGTCTTACCCACGGTTCATTATAACATGG 1316 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1261 CTGGTGTTGATGTTACCAAAGAGCCAATTCCCGTCTTACCCACGGTTCATTATAACATGG 1320 Query 1317 GTGGTATCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGCGATGATCCAGATG 1376 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1321 GTGGTATCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGCGATAATCCAGATG 1380 Query 1377 CAGTGATTCCTGGGCTAATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCA 1436 ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1381 CAGTGGTACCTGGGCTAATGGCTGCTGGAGAGGCAGCTTGTGCATCTGTTCATGGTGCCA 1440 Query 1437 ACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTATTTGGTCGTGCTTGTGCAAATA 1496 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1441 ACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTCTTTGGTCGTGCTTGTGCAAATA 1500 Query 1497 GGGTTGCAGAGATAAGCAAACCAGGGGAGAAACAGAAACCTCTTGAGAAGGATGCGGGTG 1556 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1501 GGGTTGCGGAGATAAGCAAACCAGGGGAGAAACAGAAACCTCTTGAGAAGGATGCGGGTG 1560 Query 1557 AGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAACGGGTCTCTACCTACTTCAA 1616 |||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| Sbjct 1561 AGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAATGGGTCGCTTCCTACTTCAA 1620 Query 1617 CTATCAGATTGAACATGCAGAG-GATTATGCAGAACAACGCAGCTGTGTTCCGCACGCAA 1675 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 1621 GTATCAGATTGAACATGCAGAGAG-TTATGCAGAACAACGCAGCTGTGTTCCGCACGCAA 1679 Query 1676 GAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGGGAAAGTTTTGGGGACGTC 1735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1680 GAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGGGAAAGTTTTGGGGATGTC 1739 Query 1736 CAGGTGAAAGATCGGAGTATGATATGGAACTCGGATTTGATAGAGACATTGGAACTGGAG 1795 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1740 CAGGTGAAAGATCGGAGTATGATATGGAACTCTGATTTGATAGAGACATTGGAACTGGAG 1799 Query 1796 AACCTTTTGATAAACGCATCCATAACAATGCATTCAGCAGAAGCACGAAAGGAAAGCAGA 1855 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1800 AACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGTAGA 1859 Query 1856 GGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACA 1915 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 GGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACA 1919 Query 1916 TTGGGATATTGGGAAGATGAGAAAGTGAGATTGGATTATAGGCCTGTTCACATGGACACT 1975 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1920 TTGGGATATTGGGAAGATGAGAAAGTGAGATTGGAGTATAGGCCTGTTCACATGGACACT 1979 Query 1976 CTCGACGATGAGATCGACACTTTCCCTCCCAAAGCTCGTGTCTATTGATCGAGCCCATGT 2035 |||||||||||||| ||||||||||||||||||||||||||||||||| | || | Sbjct 1980 CTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGTGTCTATTGA--GT----AT-T 2032 Query 2036 TTTTATTTTATCTGTTATCGGAATAATAATAATAATCAGGAACCCCCCaaaaaa-a---- 2090 || | | || | |||||||||||||||||||||||| |||||| | Sbjct 2033 G---ATCG-AGCCC--AT-G-AATAATAATAATAATCAGGAACCCAAAAAAAAACAAAAA 2084 Query 2091 GGGAATTAGGAGAAGA-AGACGGAGTTATGAGCTGATGGAGCACAAAGGACTGTTCTGAA 2149 |||||||||||||||| | | ||| ||||||||||||||||||||||||| ||||||||| Sbjct 2085 GGGAATTAGGAGAAGACAAA-GGAATTATGAGCTGATGGAGCACAAAGGAGTGTTCTGAA 2143 Query 2150 ACTGGGTTTACGTTTTA-CACCAGAAACGATGAAAATAAATTGATAGAAAGAGGAAAAAA 2208 |||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||| Sbjct 2144 ACTGGGTTTACGTTTTTTCACCTGAAACGATGAAAATAAATTGATAGAG-GAG-AAAAAC 2201 Query 2209 CACTACAATTCTTATTTTCTTTATCAGTTCCTGA-A-----A-T-TGTTACATTCTTTGT 2260 | |||||||| ||||||||||||||||||||||| | | | ||||||||||||||| Sbjct 2202 C-CTACAATTATTATTTTCTTTATCAGTTCCTGATACTGTTAGTCTGTTACATTCTTTGT 2260 Query 2261 TACCTGTT 2268 ||| |||| Sbjct 2261 TACTTGTT 2268 > Ahg480752 jgi|Araly1|480752|fgenesh2_kg.3__3453__AT2G18450.1 Length=1907 Score = 1496 bits (810), Expect = 0.0 Identities = 1488/1814 (82%), Gaps = 52/1814 (3%) Strand=Plus/Plus Query 236 AGATCCTCTTATACGATAGTGGATCACACTTATGATGCGGTTGTGGTGGGAGCTGGTGGT 295 ||||| || ||||| || || |||||||| |||||||||||||| || |||||||||||| Sbjct 112 AGATCATCGTATACAATCGTAGATCACACGTATGATGCGGTTGTTGTAGGAGCTGGTGGT 171 Query 296 GCTGGTCTTAGGGCGGCGATTGGGTTATCGGAGCATGGCTTTAACACCGCTTGCATTACT 355 ||||| || || || || || || ||||| || ||||| |||||||| ||||| || ||| Sbjct 172 GCTGGGCTAAGAGCAGCAATAGGATTATCAGAACATGGTTTTAACACGGCTTGTATCACT 231 Query 356 AAGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTG 415 |||||||| || || | || ||||| |||||||||||||| ||||| |||||||| || Sbjct 232 AAGCTTTTTCCAACTCGTTCCCATACAGTTGCTGCTCAGGGAGGTATAAATGCTGCGTTG 291 Query 416 GGAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGAC 475 || |||||| |||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct 292 GGTAATATGAGTGAAGATGACTGGAGATGGCATATGTATGATACTGTCAAGGGAAGTGAT 351 Query 476 TGGCTAGGTGATCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCAAAAGCAGTCATT 535 ||| |||||||||||||||| || ||||| ||||| || || ||||||||||| || ||| Sbjct 352 TGGTTAGGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATT 411 Query 536 GAACTTGAGAATTATGGGCTGCC-TTTCTCTCGTACTGAAGAAGGG-AAAATTTACCAGC 593 || ||||||||||| || |||| ||| ||||| || |||| |||| ||||| || || | Sbjct 412 GAGCTTGAGAATTACGGATTGCCATTT-TCTCGAACAGAAG-AGGGAAAAATATATCAAC 469 Query 594 GTGCATTTGGTGGTCAGAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTT 653 | || |||||||| ||||||||||| ||||||||||||||||| || || ||||| || | Sbjct 470 GAGCTTTTGGTGGCCAGAGTCTTGATTTTGGAAAAGGTGGTCAAGCATACCGTTGCGCAT 529 Query 654 GTGCTGCGGATAGGACTGGTCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGC 713 ||||||| || | ||||| ||||||||||| |||||||| ||||| ||||| ||||| | Sbjct 530 GTGCTGCTGACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAAC 589 Query 714 ATAACACACAGTTCTTTGTTGAATACTTCGCCTTGGATCTGCTCATG-GCTAGTGATGGC 772 | ||||| || |||||||| |||||||| ||||||||| || | ||| | |||||||| Sbjct 590 ACAACACTCAATTCTTTGTGGAATACTTTGCCTTGGATTTGATAATGAAC-AGTGATGGA 648 Query 773 AGTTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGTTCT 832 | || || || || |||||||| |||||||||||||| || || |||||||||| | || Sbjct 649 ACCTGTCAAGGAGTCATTGCACTGAACATGGAAGATGGTACTTTACATCGTTTCCATGCT 708 Query 833 --TCTCAAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAG 890 | || || || ||||| || ||||| || || ||||| || || |||||||| |||| Sbjct 709 GGT-TC-TACGATATTGGCTACCGGGGGCTATGGGAGAGCTTATTTTTCTGCAACTTCAG 766 Query 891 CACATACATGCACAGGGGATGGAAATGCAATGGTTGCACGGGCCGGTCTTCCACTGCAGG 950 ||||||| |||||||| ||||||||||| ||||||||||| ||||| || || ||||||| Sbjct 767 CACATACGTGCACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTGCAGG 826 Query 951 ACTTGGAGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCCGGATGTCTCATCACCG 1010 | |||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct 827 ATTTGGAGTTTGTTCAGTTTCATCCTACTGGTATATATGGAGCCGGATGTCTCATCACTG 886 Query 1011 AAGGATCTCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGA-ACGTTTTATGGAA 1069 ||||| || |||||||||| || || || ||||||||||||||||| | || ||||| Sbjct 887 AAGGAGCTAGAGGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGA-AATTCATGGAC 945 Query 1070 CGATATGCTCCTACAGCCAAG-GATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGAC 1128 || |||||||| || | | || |||||||| ||||||||||| || || ||||| ||||| Sbjct 946 CGGTATGCTCCCAC-GGCTAGAGATCTTGCTTCAAGAGATGTCGTTTCAAGATCGATGAC 1004 Query 1129 TATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCAT-AAGGATCATATCTATCTCCATC 1187 |||||||||| | ||||| ||||||| |||||| || |||||||| || || || || | Sbjct 1005 TATGGAAATCCGAGAAGGACGTGGTGCAGGACC-TATGAAGGATCACATATACCTTCA-C 1062 Query 1188 -TGAATCATCTTCCTCCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCT 1246 | || ||||| || |||||||| || ||||| ||||||||||| || ||||| || || Sbjct 1063 TTAAACCATCTACCACCAGAAGTGCTTAAAGAGAGGCTTCCTGGTATATCTGAAACTGCG 1122 Query 1247 GCCATCTTT-GCTGGTGTTGATGTTACCAA-AGAGCCAATTCCTGTCTTACCCACGGTTC 1304 || || ||| || ||||| ||||||| ||| ||||||||||||||| || || || || | Sbjct 1123 GCTAT-TTTCGCGGGTGTCGATGTTA-CAAGAGAGCCAATTCCTGTATTGCCTACTGTGC 1180 Query 1305 ATTATAACATGGGTGGTA-TCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGC 1363 ||||||| |||||||||| |||| |||||||||||||| |||||| |||| | | ||| Sbjct 1181 ATTATAATATGGGTGGTATTCCC-ACAAACTACCATGGAGAGGTAATTACTGTTAGAGGT 1239 Query 1364 GATGATCCAGATGC-AGTGA-TTCCTGGG-CTAATGGCTGCTGGGGAGGCAGCTTGTGCA 1420 ||||||||| |||| | | | |||| ||| ||||||||||| || || |||||||||||| Sbjct 1240 GATGATCCAAATGCTA-T-AGTTCC-GGGACTAATGGCTGCAGGAGAAGCAGCTTGTGCA 1296 Query 1421 TCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTATTTGGT 1480 |||||||||||||| || || ||||||||||||||||| || |||||||| || ||||| Sbjct 1297 TCTGTTCATGGTGCTAATAGACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGA 1356 Query 1481 CGTGCTTGTGCAAATAGGGTTGCAGAGA-T-AAGCAAACCAGGGGAGAAACAGAAACCTC 1538 | ||||||||||| || |||||||||| | || |||||||| ||||||| |||||||| Sbjct 1357 AGAGCTTGTGCAAACAGAGTTGCAGAGATTCAA--AAACCAGGCGAGAAACTGAAACCTC 1414 Query 1539 TTGAGAAGGATGCGGGTGAGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAACG 1598 | |||||||||||||||||||||| ||||| |||| ||||| | | ||||||||||||| Sbjct 1415 TAGAGAAGGATGCGGGTGAGAAGAGTATTGAATGGTTGGACCGAATAAGAAACTCAAACG 1474 Query 1599 GGTCTCTACCTACTTC-AACTATCAGATTGAACATGCAGAGGA-TTATGCAGAACAACGC 1656 |||| ||||| ||||| || ||| | || |||||||| | || | ||||| ||||| || Sbjct 1475 GGTCGCTACCGACTTCTAA-AATCCGCTTAAACATGCA-AAGAGTAATGCAAAACAATGC 1532 Query 1657 AGCTGTGTTCCGCACGCAAGAAACAT-TGGAAGAAGGTTGTCAGTTGATTGACAAGGCCT 1715 ||||| || || ||||||||||| | | || ||||||||| | |||||||| ||| | | Sbjct 1533 TGCTGTCTTTCGTACGCAAGAAAC-TCTAGAGGAAGGTTGTGATTTGATTGATAAGACGT 1591 Query 1716 GGGAAAGTTTTGGGGACGTCCAGGTGAA-AGATCGGAGTATGATATGGAACTCGGATTTG 1774 |||| |||||||| || ||| | || || |||||||||||||||||||||||||||||| Sbjct 1592 GGGACAGTTTTGGTGATGTCAAAGT-AACGGATCGGAGTATGATATGGAACTCGGATTTG 1650 Query 1775 ATAGAGAC-ATTGGAACTGGAGAACCTTTTGATAAACGCATCCATAACAATGCATTCAGC 1833 ||||| || || ||| | ||||| |||||| | || || | ||||||||||||||| || Sbjct 1651 ATAGAAACTAT-GGAGTTAGAGAATCTTTTGGTTAATGCGTGCATAACAATGCATTCTGC 1709 Query 1834 AGAAGC-ACGAAAGGAAAG-CAGAGGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAG 1891 || || | ||| |||||| | |||||||||||||||| || || ||||||||| |||| Sbjct 1710 TGAGGCTAGGAA-GGAAAGTC-GAGGAGCACATGCTCGTGAGGATTTCACGAAACGAGAC 1767 Query 1892 GATGGAGAAT-GGATGAAGCATACATTGGGATATTGGGAAGATGAGAAAGTGAGATTGGA 1950 |||| | ||| |||||||||| |||||||| ||||||||||| | ||| |||| |||||| Sbjct 1768 GATGCA-AATTGGATGAAGCACACATTGGGGTATTGGGAAGAAGGGAATGTGAAATTGGA 1826 Query 1951 TTATAGGCCTGTTCACATGGACAC-TCTCGACGATGAGATCGACACTTTCCCTCCCAAAG 2009 ||||| || || || ||| | || | | || |||||| | |||||||| ||||| ||| Sbjct 1827 GTATAGACCAGTGCATATGAATACAT-TGGATGATGAGGTTGACACTTTTCCTCCTAAAC 1885 Query 2010 CTCGTGTCTATTGA 2023 ||||||| |||||| Sbjct 1886 CTCGTGTTTATTGA 1899 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87950375705 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5