BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G67070.1 Length=827 Score E Sequences producing significant alignments: (Bits) Value Ahg951519 jgi|Araly1|951519|scaffold_803406.1 643 0.0 > Ahg951519 jgi|Araly1|951519|scaffold_803406.1 Length=431 Score = 643 bits (348), Expect = 0.0 Identities = 399/423 (94%), Gaps = 5/423 (1%) Strand=Plus/Plus Query 77 ctctAGTTTCCCCCAACAATCGCCATGGCAGCTTCGtctctcaatctcctcctcattctc 136 |||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1 CTCTCGTTTCCTCCAACAATCTCCATGGCAGCTCCGTCTCTCAATCTCCTCCTCATTCTC 60 Query 137 tctcttctcact-ttcatttctctccagagatctgaatctctttccgataatccatctct 195 ||||||||| | |||||||| |||| ||||||||||||||| ||||||||||||||||| Sbjct 61 TCTCTTCTC-GTCTTCATTTCACTCCCGAGATCTGAATCTCTCTCCGATAATCCATCTCT 119 Query 196 cACTCTTCTACCCGACGGATTCGACTGGCCGATCTCTCACTCCGATGAATTCGATATCAT 255 | |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 120 CGTTCTTCTACCCGACGGATTCGACTGGCCGATCTCTCACTCCGACGATTTCGACATCAT 179 Query 256 CGACGGTGAAGAAAGCTTCGAAGTTACGGAGGAAGACGACGGCGTAACAGATCGACGGTC 315 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 180 CGACGGTGAAGAAAGCTTCGAAGTTGCGGAGGAAGACGACGGCGT---AGATCGACGGTC 236 Query 316 ATTGTACTGGCGGAGGACGAAGTATTACATATCGTACGGTGCATTGTCGGCGAATAGAGT 375 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 237 ACTGTACTGGCGGAGGACGAAGTATTACATATCGTACGGTGCATTGTCGGCGAATCGAGT 296 Query 376 GCCATGTCCTCCCAGATCTGGAAGATCGTACTACACTCATAACTGCTTCAGAGCTAGAGG 435 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 GCCGTGTCCTCCCAGATCTGGAAGATCGTACTACACTCATAACTGCTTCAGAGCTAGAGG 356 Query 436 TCCCGTTCATCCGTATAGCCGAGGCTGCTCGTCGATCACTCGATGCCGGAGATAGATGAA 495 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 357 TCCCGTTCATCCGTACAGCCGAGGCTGCTCGTCGATCACTCGATGCCGGAGATAGAAGAA 416 Query 496 GAA 498 ||| Sbjct 417 GAA 419 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30574579434 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5