Detail


ID : Ahg311229

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311229|fgenesh1_pm.C_scaffold_1000009
Sequence
ATGAAGAACT TGAAGCGTGA TAAGGGTGAA GATGCTGTTA AAGGTCAAGC GGTGAAGAAT CAGAAGGCTC TTTGGGATAA AACTCTGGAG TTCAGATTCT TACTTCAGAA AGCATTTGAT CGTTCTAACA GATTGCCACA GGAGCCTGTG AAATCGTATT TTTGTTCGGA AGATGAGGAT GTCTCAACAG CATATACAGA TCTAGTTACT TCATCTAAGA AGACATTAGA TTTCCCTCTT GGAGCTTTGT TTGAGAAGAA CCCCTCGGTT GATCAACAAG TGAATGAAAA GGCTGTGGAC AAATGGCAGA GAAGAACAGA AGTTACAACT GGTGCAGCTG CTATTAAAGG AAAGCTCCAC GCCTTTAACC AGAACGTTAG TGAACAGGTT GCTTCCTACA TGAGGGATCC AAGTAGAATG ATTAAACAAA TGCAACAATC AAGATCTACT GTTGCTGTTT TTGGAATTGA AAAACAACAA GAAGGAGACC CTGAACTTGT GGAAGATGCT GAGTTCTATA GGCAGTTACT AAAGGAGTTT CTTGAGACCA TCGATCCAGC TTCCCCTAGC GATAATCAAG CGGCTTTCTA CGAGATGAAG AAGTTTCAGA CGAAGAAGAG GAAAATTGTG GATCGACGTG CCTCTAAGAG CAGAAAGATC AGGTATAATG TTCATGAGAA GATTGTCAAC TTCATGGCTC CACGACCAGC AAAGATTCCT CCAAACACTG CGGATTTGCT CAAGAATCTC TTCGGTCTCA AGACCAGAAA CGTTCAGTCT GAAGCGTAA
Length789
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18758120.. 18760121
Download Sequence
A.thaliana
AGI-codeAT5G61330.1
DescriptionrRNA processing protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.9808 Ahg349526 Transducin/WD40 repeat-like superfamily protein
50.3587 Ahg932816 Transducin/WD40 repeat-like superfamily protein
53.1789 Ahg474417 Ribosomal RNA processing Brix domain protein
55.7136 Ahg347050 histone-lysine N-methyltransferases
81.8291 Ahg489194 Nucleotidylyl transferase superfamily protein
86.3423 Ahg341749 Predicted eukaryotic LigT
87.0919 Ahg484065 SEC12P-like 2 protein
87.6641 Ahg951310 Transducin/WD40 repeat-like superfamily protein
92.2605 Ahg496171 Thioesterase superfamily protein
94.2815 Ahg492339 Ubiquitin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression