Detail


ID : Ahg311240

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311240|fgenesh1_pm.C_scaffold_1000020
Sequence
ATGGTTTCTT CTGTCCCTAA ACTCCATGCT TTGTTTGTCG CCAAGTCTCT ACCAGTAGTT ATCCGAGCCG CCAAAATTAC CAATGAAGAA GGTTCTGCGT CGACCAAATC AAAACTCGCC AGGTCCTTGG CGCGTGCCGT GAACTCTAAC CCGTGGTCGG ACGAACTCGA GTCTTCACTC TCATCTCTTC ACCCGTCTGA ACCTCTCTCC AGAACCACCG TTCTCCAAAC CCTGCGTCTC ATCAAGGTCC CTGCCGATGG TCTCCGGTTC TTCGACTGGG TTTACAACAA GGGTTTCTCT CACAAAGAGC AGTCTTTCTT CCTCATGTTA GAGTTCCTAG GTCGAGCTCG CAATCTCAAT GCGGCTCGCA ATTTCTTGTT CTCCATCGAG AAAAGGTCTA ACGGCTGCGT CAAGCTCCAG GATCGCTACT TCAACAGCTT GATTAGGAGC TACGGCAACG CTGGGCTCTT CCAGGAGTCA GTGAACCTGT TCCAGACCAT GAAGAAGATG GGCATCTCGC CTTCCGTGCT TACCTTCAAC AGTCTTCTCT CGATTTTGCT TAAGCGTGGC CGAACTGGAA TGGCCCATGA CATGTTCGAC GAAATGCGCC GTACCTACGG GGTTACCCCA GATTCCTATA CTTTCAATAC ATTGATAAGT GGGTTTTGCA AGAACTCCAT GGTCGACCAA GCCTTTAGGA TTTTTAAGGA AATGGAGCTG TATAGTTGCA ATCCTGACGT TGTTACATAT AACACGATCA TCGATGGGTT ATGCAGAGCT GGCAAGGTCA AGATTGCACA CAATCTTTTG AATGGAATGT TGAAGAAAGC AACGGCTGTG CATCCCAACA TTGTTAGTTA CACTACTCTG CTGCGAGGCT ATTGTATGAA GCAGGAAATT GATGAAGCAC TGCTTGTGTT TCATGAAATG CTGACCAGAG GGCTAAAACC CAATGCTGTA ACTTACAATA CTCTGATCAA GGGGCTCTCG GAGGCTCATA GATATGATGA GATCAAAGGA TTTTTGATTG GAGGGGACGC AGTTACCACT TTCTCTCCAG ATGCCTGCAC TTTTAATATT TTGATCAAAG CCCACTGCGA TGCTGGACAT CTAGATGCAG CGATGAAGGT GTTCCAAGAA ATGCTGAATA TGAAGTTGCA TCCGGATTCA GCTTCATATA GTGTTTTGAT TCGTACTCTG TGCCTGAGAA ATGAATTTGA TAAAGCCGAG ACATTGTTTA ATGAGTTGTT TGAGAAGGAA GTATTGTTAG GTAAGAATGA ATGCAAGCCT CTTGCTGCAG CTTATAACCC AATGTTCGAA TACTTATGTG CCAATGGGAA AGCAAAACAA GCGGAGAAAG TTTTTAGGCA GCTGATGAAA AGAGGAGCGC AAGATCCATC CTCTTACAGG ACTTTGATCA CGGGTCTCTG CAGAGAAGGT AAATTCAAGG CTGCTTATGA GCTGTTGGTT CTAATGCTGA GGCGGGAATT TGTTCCTGAT CCTGAAACCT ACGAGGTATT GATTGATGGG CTATTGAAGA TAGGTGAAGC TCTTCTTGCT CATGATACCC TACAAAGGAT GCTAAGGAGC TCTTATCTTC CGGTTGCAAC CACTTTCCAT TCTGTACTTG CAGAACTTGT GAAAAGGAAA TTTGCTAACG ACTCTTTCGG CTTGCTAACG GTAATGTTGG AAAAACGAAT AAGACAGAAC ATTGATCTTT CAACGCAGGC TGTCAGATTG GTTTTTAGTA GTGCACAGAA AGAAAAGGCA TTTCTGATTG TTAGGTTGCT TTATGACAAC GGGTATTTGA TTAAGATGGA GGAATTACTT GATTTCCTCT GCGAGAATCG AAAACTGCTT GATGCACACA CACTTGTTCT GTTTTGTCTG GAAAAGAGTC AAATGGTAGA TATCGACACG TGTAACACGA TCATAGAAGG ACTCTGTAAG CATAAGAGAC ACTCTGAAGC GTTTAGTTTG TACAATGAAT TAGTAGAACT AGGAAATCAC CAACAGCTTA GCTGCCACGT GGTTTTGACA AATGCCTTAG AGGCTGCTGG AAAGTGGGAA GAACTTCAGT TTGTGTCAAA GAGGATGGCT ACAATGAGAA AATCAGATAA TTGCGCTGTA TCAGAATGA
Length2139
Protein Sequence
Protein Residue
Map Locationscaffold_1: 65744.. 67876
Download Sequence
A.thaliana
AGI-codeAT1G02060.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg358710
4.79583 Ahg493299 RNA helicase 1
32.1248 Ahg497150 ARM repeat superfamily protein
63.9218 Ahg470071 Chalcone and stilbene synthase family protein
79.3158 Ahg892794 Tetratricopeptide repeat (TPR)-like superfamily protein
79.7245 Ahg336766 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
84.5872 Ahg470771 Transcription factor IIA, alpha/beta subunit
96.933 Ahg913255
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression