| Annotation |
|---|
| Description | jgi|Araly1|312521|fgenesh1_pm.C_scaffold_1001301 |
| Sequence |
ATGGCACCGA GGTCAAGCAA AGGGAAATCA AACAACAGAG GGAAAGGAGG AGATAAGAAG AAGAGAGAAG ACAAACTGTT GGCACCGAGT CTTGTTGAAA TCACAGTCAC CACTCCGTAC GAAACTCAAG TGATACTCAA GGGAGTTTCT ACTGACAAAA TCATTGATGT GAGAAGGCTT TTGGCATCTC ACGTTGAGAC TTGCCATTTC ACCAACTATT CTCTCTCCCA TAAGGTGAAA GGGCATAAAT TGAATGACAA CATCCAAGTG CTTTCCCTCA AGCCTTGTTT CCTCCGCATG ATTCCAGAGG AGTATCTAGA GGAAAGCCAG GCGTTGACTC AGGTACGGAG AGTCATAGAC ATCGTAGCAT GCACCACCAG GTTCTTCTCC GCTTCCCCCA AATCCCCCAA CAAATCCATA GCCGCCGGCA ATGCCACTCA GACGCCGGAG CCGGACGGCC TCGACATGGT CGCCATCCAC CCCACTCCCA AACTTTCTCA GTTCTACGAG TTTTTCTCCA TTCCTCACCT CTCTCCTCCG ATTCTTCACT TGAAGAAAGT TGATGGTGAA GACGCTGGAG AGAAGCGTGA TGGTGACTAT TTTGGACTCA AGGTTAAGAT TTGCAATGGG AAGGTTATAC ATGTGATTGC TTCGGTGAAA GGGTTCTTCG CCGTTGGAAA GCAGCTCACA CATTGCCACT CCATTGTTGA TTTGCTTCAG AATGTCAGCA ATGCTTTTGC CAAGGCATAT GAATCTCTAA TGAAAACTTT CACTGACCGG AATAAGTTTG GCAACCTCCC GTGTGGATTA CGCTCAAATA CATGGCTTGT ACCTTCTCCT GTTTCTGAGT CTGCTTCTCC TTTACCAGTA GAGGATGAAC ATTGGGGCGG GAATGGTGGA GGTCAGGGGA GAAATGGTGA ATATGATCAT CGACCTTGGG CGGCACAGTT TTCTGTATTA GCTACGCTTC CTTGCAAGAC GGAGGAGGAG AGAGTTATTC GAGATAAGAA AGCTTTTTTG CTTCATAGCC AGTTTATCGA CACCTCGGTG CAAAGAGCTG TTAGAGCCAT TTGCAATTTG ATGGATACTA ATCAACACAC AAGTGGGACT ACTGACTTAC CTGCTGGCTC GATCCTTCTT GAGGATCATG TTGGGGATTT GTCTATTATT GTAAAACGCG ATATAGCCAC CCTTGACCCA AAGCCTGAAG CTACATTTCA AAATGAAGCA TTTGTTCTAT CATCCCAGGA ACTTGCCGAA AAGAATTTGC TAAAAGGGAT AACAGCTGAT GAGAGTGTGA TTGTTCACAT TATAACCAGT GAAGAAAAAA ATGTCCAGGA TACTCCGGCT TTAGGCACAG TTATCGTAAG ACACTGTGGA TATACTGCGG TGGTAAATGT CAAGGGTAAA ACTCAGAAGG CAATATCTGA TTTCCGTGAT ATTTTGATCG ATGACCTGCC GGATGGAGGA GCTAATGCTC TTAACCTTAA CAGCTTAAGG GTTCAGCTTC GCAGGTCCCA TAGTGTTAGA ATATCTGGAG AGAACCAGCC CACACTGCTT GATTCGGATG ATTTAGAGTC TTATAGATGT ATTGTACAGG ATTTAGTAAA AGTTAACTTA ACAAAGTTAG AAGAAAAAAG GGTATCTTCT GTAAGACCCA TCAGATGGGA GCTCGGTTCT TGCTGGGTTC AGCATCTACA AAAGAAAGAA ACAGACGTCT GTGGAAAGCC TGCAACTAAT GATGAGACTG AACTTTCAAT TAAAGGCTTG GGAAAACAAT TTAAAGTTCT AAAGAGCAAA AGTAAGAAAT CAGAATCTAT AAGTACCGTG AAGGAAAAGG AAAAAGATAT CAGACTACGC GAGTTAAATG GGGAGGCTGA TCTAGGGCAG AAAAGCATTG ATGGACACTT TACTGAACTG AAGGAGCTGC TTTCTGAAGA AGCTTTCTCT CGTCTACAAG AAACTGGAAC TGGTCTCCAT TTAAAGTCAA AAGAAGAGCT TACCAAGATG GCATATGGTT ACTATGATGA AATTGCTTTG CCAAGGCTGG TAGCAGATTT CGGGTCACTG GAGCTTTCTC CAGTTGATGG TCGCACAATG ACTGACTTCA TGCATATAAG AGGACTCCAA ATGCGTTCTC TAGGACATGT GGCTAAAATT GCTGAGAAAC TTCCTCATAT ACAGTCCCTC TGTATTCATG AGATGATTAC AAGAGCTTTC AAGCATCTTT TTAGGGCGGT TATTGCATCT GTCAATAATA TGGCTGAGAT ACCTGTGGCA GTAGCTGCTT CATTAAATTT CATGTTTGGC CACCGTGAAT TGGAAGGGTC TGATAGGATC CCCAGTGAAG AGTATTGTCT CAGATTACGG TGGCTACAGA AATTTCTCTC CAGAAAATTT GGTTGGATAC AGAAAGATGA GTTCAATCAT TTGAAAAAGT TTTCTATCCT CCGAGGACTC TGCCAGAAGG TTGGGTTAGA ACTAGTTGCA AGAGATTATG ACTTCGATTC TCCAAATCCC TTCACGAGCT CTGACATTTT TGGCTTGGTA CCTGTGTGCA AGCATGTGCT GTGTATTTCA TCTGACGGAA GGACACTCTT GGAGTCATCA AAACTTGCCC TTGACAAAGG AAAACTTGAT GATGCTGTGA ACTATGGAAC AAAGGCATTA GTCAAGATGA TTGCTGTCTG TGGGCCTTAT CACAGAAATA CTGCTTGTGC GTACAGCCTT CTCGCAGTTG TACTATACCA CACTGGCGAT TTTAACCAGG CAACAATATA TCAGCAGAAG GCTCTAGATA TAAATGAGAG AGAACTTGGT CTCGACCATC CCGACACTAT GAAAAGCTAT GGGGATCTTT CTGTATTTTA CTATCGTCTT CAACACTTTG AATTGGCACT AAAATATGTG AACCGTGCGT TATTTCTCCT TCACTTCACT TGTGGGCTAT CTCACCCAAA TACTGCTGCC ACATATATCA ATGTGGCTAT GATGGAAAAA GAAGTAGGGA ATGATCATCT AGCTCTAAGA TACCTGCATG AAGCGCTAAA GTGCAATAAA AGATTGCTAG GAGCTGACCA TATTCAGACT GCGGCAAGCT ATCATGCAAT AGCGGTGGCT CTCTCTTCCA TGGAAGCACA TTCATTGAGT GTGCAACACG AACAAACTAC ACTTCAGATA CTTACAGCAA AACTTGGATC AGATGACCTT CGTACACAGG ATGCTGCTGC ATGGCTCGAA TATTTTGAAT CAAGAGCCAT AGAGCAGCAG GAAGCAGCAC GAAATGGAAT CCCAAAGCAT GATGCTTCCA TCGCAAGCAA AGGCCACCTT AGTGTATCAG ATCTCCTGGA CTATATAAGT TCTGATCCAG ACACCAAAGG AAGTGTTGCT CACAGGAAAC ATCGGCGTGC CAGGGCATTA CAGGTCAATG ATAGTGTTGC ATCAGCTGAT GATGACGCCC ATAGAGTTGA TTCTCAGATT GGCATTGTTG CATGGAACGA CGTGGCAGAA GCGGATGCCA TTAAGAGTAG GACTGAAGTA AATGATCCTA ATGCAGTTGT TGATGAGATC AAAATTGAGA CAGGTGATAT TGTAGTACAC AGGCTAAATG TAGACAGCCA AACTGTGGAA GAGTCAACTT TAGATGATGG CTGGCAAGAG GCATACTCAA AGGGGAGATC CGGAAATGGT GCTGGAAGGA AATTCAGACA AAGGCAGCCT GATCTTATGA AAAAGAGAAT GTCGCTTAAT AAACATTTCA ACAGGAGACA GGATGTTCAG CAACAGAATA TATCTTCCTT GCAGAAAACA AGCAAAAGAC CCTCCCTCTC TAAGTCATCA TCCCATAGGG CTATGAAGAA TGCAGAGATA GATGTCAGTA CAAATACAAC TAAACCACAG TTAATGGCTT CTGGTTCTGC TGCTGTGACC AGTACTACTT TGGCTTCAAA GTCTCTCTCA TACAAAGAGG TTGCTTTGGC ACCACCAGGT ACAGTTCTGA GGCCAATGTT AGAAAAATTA GAACTGAATT TGGAGAGAAC TGAAACTCAG ATATACAGGA CTTCAAGTGC GTCAACTGGA GAAGAAAGCA AGTCTGACAC TGTAATGTTG GATTTGCCAA TCGAAGGCAC AGAGCTTCCC TGTGAAAAAC AAGAATCACA AGAAAGTGCT GAGTCAGTGG AAAATTTAAC GTCAGAGTCT GAAGGGGATC TGGGGTCCTA TTGTGGGCAA AAGGCTTCTG ATATAAGCCA GACAAAGCTA TCAGCCGCTG CAGAGCCTTA CAACCCTGGA GGTTTCTTGT TTATTGATCT GCAAAGCTCA GCAGCAACAA CAGGCAACTA CCCGATTATG GTTGCAGACC CTATTTCCTG GGCTGGAGTT CCATGTGGGA TTCACTCACC ACCATATTAT AGTGCTAATC ACTCCCATGG AGTTGGGATG CCAAGAAGCA TGAATCCAGA TGCACCAGAG TTTGTTCCAA TGAGATCCGT GCAGAATAGC TCACAACATG CAGGTGGAGA TGCAAGTGTA TCCGTCGACT CCAGCAGTTT CCTAAAGGCT GAGAAAGAAG CAGTTGCTTT GAAGAAGCGA GAGCTAGCCA GCTTCATAGT AAAGTCATCC CAGAAGGAGG TTCCGGCTGC TCTGAGGAAA ACGAGCCCAA AAGCTGAGTC AGGAGATACC TCCGCAAAGG ATAGTGCATT AACCGAGGTA GTTTATAGTA GAGAAGAGGA GAGTGGAGCG AATGCAAATG AGACAAATGG AGGTGAAGGG TTTGTGATTG TGGCAAAGAA GAGGAGGAGG AAGAACAAGC TGCGGCTTAC AAATGTTGGG GCTGGGCTGT ACCATCAACC GTCGTCAGTT TGTGCATAA |
| Length | 4869 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6165077.. 6172763 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G15290.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg482407 | NAD(P)-binding Rossmann-fold superfamily protein |
| 11.3137 |
Ahg495918 | phototropin 2 |
| 17.2047 |
Ahg473611 | aspartate kinase-homoserine dehydrogenase i |
| 20.1742 |
Ahg472217 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
| 21.5407 |
Ahg473472 | UDP-Glycosyltransferase superfamily protein |
| 25.4951 |
Ahg951334 | ABC2 homolog 13 |
| 26.1534 |
Ahg312200 | starch synthase 3 |
| 29 |
Ahg481114 | K-box region and MADS-box transcription factor family protein |
| 29.5466 |
Ahg481283 | aldehyde dehydrogenase 11A3 |
| 31.9374 |
Ahg490234 | Outer arm dynein light chain 1 protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|