Detail



ID : Ahg312611

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312611|fgenesh1_pm.C_scaffold_1001391
Sequence
ATGGCGAATT CAGCGTCACT ACTGTACGAT CAGCTCAAGG TTGCGGAGCC GTTTTTCTTG TTTGCTGGTC CAAATGTGAT TGAATCCGAA GAACATGTTC TTCGAATGGC GAAAAGCATC AAAGAGATTT CTACAACGCT TGGATTGCCC CTGGTTTTCA AGTCAAGTTT CGATAAAGCT AACAGAACTT CATCAAAGTC CTTCCGAGGT CCTGGCATGG CTGAAGGTCT CAAGATTCTT GAGAAGGTGA AAGTAGCATA TGATCTACCA ATCGTAACTG ACGTTCATGA ATCGAGCCAG TGTGAAGCGG TCGGCAAGGT TGCAGATGTA ATTCAGATAC CAGCGTTCTT ATATCTTCTG GTCGCGGCAG CCCAAACTGG GAAAATTATC AACATAAAGA AAGGACAATT TTGTGGTCAC TCTGTCATGA GAAACTCGGC CGAGAAGGTT AGACTCGCAG GGAATCCAAA TGTGATGGTT TGTGAAAGAG GAACCATGTT TGGATACAAT GATTTAATAG TAGATCCACG AAATTTGGAA TGGATGAGGG AAGCTGATTG TCCCGTTGTT GCTGATATAA CTCATTCATT ACAACAACCT GCAGGCAAGA AGTTAGATGG TGGGGGTGTT GCTAGTGGAG GCCTTCGCGA ATTAATACCA TGCGTAGCAA GAACAGCCGT AGCTGTTGGT GTCAATGGAA TTTTCATGGA GGTGCATGAT GATCCTTTGA ATGCACCAGT CGATGGTCCA ACACAATGGC CTCTGCGTCA TCTAGAAGAA CTGCTAGAAG AGCTCATTGC AATCGCGAGT GTCACAAAGG GGAAACAGCA GTTCCAAATC GATCTCACGC CTTATCGTGA TTAG 
Length864
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6536067.. 6538432
Download Sequence
A.thaliana
AGI-codeAT1G16340.4
DescriptionAldolase superfamily protein
TAIR curator summaryEncodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500).
Alias[ATKDSA2][ATKSDA]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg949223
19.6723 Ahg475417
21.166 Ahg912904
44.1588 Ahg311464 Cysteine proteinases superfamily protein
50.5272 Ahg484166 homeobox protein 21
51.8266 Ahg900248
60.2495 Ahg480715 Protein of unknown function (DUF726)
66.7458 Ahg475777 Zinc finger C-x8-C-x5-C-x3-H type family protein
69.8999 Ahg314253
77.8974 Ahg932200
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression