| Annotation |
|---|
| Description | jgi|Araly1|312743|fgenesh1_pm.C_scaffold_1001523 |
| Sequence |
ATGGATACGT CTATTCCAAT CGAGGCAATA CCGCTCGCAA GTTTCATACC GGATTTGGTA GATGACCAGA CCAGAAACAC ATCAACGATT CCGACAATGA CGTCACCGCT TCATATAACC ATTATGCCAT TTGACGATGT CAATGATGAA ACCCACAAGA CATCTGCAAC ATCTCCTCCT ATAATGGTCT CACCTCTGCG AACCATCTGG CCATCCAACA AGGACTGGTA TGATGGAGAT GCTGGTCCTA GTACTGGTCC AATCAAACGA GAACCGTTCG ATGATGAAAC GCACAACTTA TCCGCACACC CACCTGAAAT GGTGACTCCA CTGAACACCA TTAGGCCAAT TGATGACTCT AACAACAATT CTAATGATGC GGGTGTTGGT CTTAGCACTG TTCCAGCAAA ACGAGGACGT GGCCGACCAA AAGGTTCAAA AAACTCAACG TCGACCGAGC GGAAGAAGAC AAAAGTATAT GATCCCAACA GCTTAAGGGT TACAACTTTT CTTGGGAATT TTGATTCAGA GATAACCGAC GCAGAGAGAG AAAATGGAAA CCAAGAGTTA GCTGATTCAG TAATGATGCG GTTTGATGCG GTTAGACGCC GATTATGCCA ACTAAACCCT ACGGAAGACA TCCTTGTAAC GGCTAATACG AATTTCACGA AATTTGGGGT CAAGACAAAT ACGAGAAGGA GAATAGGTCC AGTTCCTGGA GTACAAGTAG GAGATATATT CTACTTCTGG GGTGAAATGT GCTTAGTGGG GCTTCACAGA CAAATGGTCG GCGGCATTGA TTTTCTGACG GCTGCAGAGA GTGTAGTGGA AGGTCATGCT GCAACGAGTG TGGTCACAGC AGGACAATAC GATGATGAAA CCGATGGGCT TGAATCGTTG ATCTATTGCG GACAGGGTGG ATCGGACAAG TCCGGTCGTG TTTTTGATCA AGAGCTGAAA GGGGGAAATC TTGCACTGAA AGCAAGTGTA AGCAAAGGGA ATGACGTTAG AGTCGTGAGG GGAGTGATGC ATCCTTTTGA CAACAATCAG AAGGTATATA TCTATGATGG GATTTATCTG GTTACAGAGT CCTGGACAGT GACAGGAAAA TCCGGTTTCA TGGAGTTCAG ATTCAAATTG GTAAGGAAAC CAAACCAACC TTCTGGTTAT GCAATCTGGA AATTAGTTGA AAATTTGAGG GACAATGACT TGATTGATTC AAGGCCAGGT TTTATCCTTA GAGATCTTTC TTTTGGAGCT GAGCTTTTAC GAGTTCCGCT TGTTAATGAA GTCGATGAAG ACGACAAAAC GATTCCCGAA GATTTTGACT ACATCACATC TCAGTGTCAC TCTGGTATGA CGTTTGATCT TCAATCACTT GGATGCCAAA ATTTTCAACA TCAGTCATGC ATTGATCAAA ACAGCACCTG CAAGCAGAGA AACGGTGGCC TACTACCGTA CCATAACAAC ATTTTGGTTT GTCGTAAACC GTTGATTTAC GAGTGCGGTG GTTCTTGTCC ATGCCCTAAC AATTGCCCAA CCAGGTTGGT TCAAACCGGC TTGAAACTCC AGTTGGAAGT GTTCAAGACA AGAAACTGTG GTTGGGGTTT AAGGTCATGG GATCCAATTC GAGCTGGAAG TTTTATCTGC GAGTTTGCCG GTGTGAGAAA GACGACGAAA GAAGAAGTAG AAGAGGATGA TGATTACTTG TTCGACACGT CTAAGATTTA TCCCAGGTTT AAATGGAACT ACGAACCTGA GCTTTTGCTT GGAGATTGTT GGGAGCAAGT CTCAGAATTT ATCAATCTTC CAACACAAGT CTTGATAAGC GCCAAGGAAA ACGGAAATGT TGGTCGGTTC ATGAACCACA GCTGTTCACC GAATGTTTTC TGGCAGCCTA TAGAGTATGA AAACAACGGT GATATATATA TTCTTATTGG ACTTTTTGCT ATGAAGCATA TTCCTCCAAT GACAGAGTTA ACATATGACT ATGGAGTTTC TCGTGTGGAG AGGACCGAAG AAGATGAAAA GGGTTTTCTT GTCTGCCCTT ACCTTTCTTT CGTCCCTCTG GCCATCTTCC TCGGAAATTC ACTTTCATTT CATGTAATTC GATTCTCAGA TTCTAAAGGA AGAGCATGGT ATGATAAAAT TAAAATCTAC CGTAAATTGG ACAGTTTGGC TTCTCAGGGT AAGGTTTCTT TAGAATCAAG TGATTCTTCA GGATTGGATT CTGTAAAGGA TGAACCAGAG AAACTTACAG AGGAACAAAT GGAGGGAGAG GGTTTTAAGG AGAAGTTATC AGACTCTGTT TTGATTGATG AGAAGCTTGA AGAGTACAGT GATTGTGATC AGACAGCAAC CACTTCCCCT TGCCCCAAAG ATCCAGTATC TTCTCAATCT ACTCACCGCT CCCCGGAAAG CTTTGTGACT GCAATAACAT GTAATGATGA TACTTTTGTA TCTGTCTCTG GGATTTCTAG GGGTGTTTCA AATCTAATCC CATTCGCTAC AGAGACTCAA GCTTCACCTG TTCAAGACAA AGTGCCAAGC ACTAGATCCT ATGGCAGCAA CTCTATGAAA GTTAATAATC AAGATGAGTT CTTCATTGAA GACTTCGATG TTGGTCCAAT GGATACCATT GATTTGTATG ACATGACATT TCGAGAAGAC CCCTCAGATT TTGACGACAA TTTGCTATAT GCAACGCGTG ACAGGACTAA GCAACTCAGA TCATTCAAGA GAAAGGTAAT GGATGCTATA ACTTCGAAAA GAAGAAGAGA GAAGGAATAT GAGCAGCTTT CTATATGGTT TGGAGACGCA GACATGGGTT GTGATCTGGT AAACACTAAG GAGCATGCTA CAACATCTCT AGACTCCAAA AGCTCACAGT CAAATGTGCC ATTTGTATCA CAAGATTCTG AGTGGGAGCT TTTGTAA |
| Length | 2937 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7126593.. 7130560 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17770.1 |
| Description | SU(VAR)3-9 homolog 7 |
| TAIR curator summary | Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. |
| Alias | [SDG17][SUVH7][SET DOMAIN PROTEIN 17][SU(VAR)3-9 homolog 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 22.5832 |
Ahg934176 | |
| 34.8999 |
Ahg336359 | SBP (S-ribonuclease binding protein) family protein |
| 36.1663 |
Ahg907524 | glutathione S-transferase TAU 15 |
| 41.2432 |
Ahg895136 | global transcription factor C |
| 43.3359 |
Ahg484673 | NAC domain containing protein 3 |
| 52.7636 |
Ahg497092 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 54.4977 |
Ahg311800 | Neutral/alkaline non-lysosomal ceramidase |
| 57.9224 |
Ahg927120 | Protein of unknown function (DUF300) |
| 67.082 |
Ahg951424 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 69.7209 |
Ahg492927 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|