Detail



ID : Ahg312922

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312922|fgenesh1_pm.C_scaffold_1001702
Sequence
ATGATTGGAT CGTTTCTAAC AAGAGGACTT GTAATGGTAT TTGGATATGC GTATCCTGCG TATGAATGCT ACAAAGCTGT TGAAAAGAAT AAGCCTGAGA TGCAACAGCT TCGATTCTGG TGCCAATACT GGATTTTGGT GGCTGCTTTG ACGATTTTCG AAAGAGTTGG CGATGCTTTT GCTTCATGGG TTCCACTATA CTGTGAGGCA AAACTGGCAT TTTTCATATA TCTTTGGTTC CCCAAGACCA GAGGAACTAC ATATGTGTAC GATTCTTTTT TTAGACCATA TGTTGCAAAG CATGAAAATG AAATCGACCG CAACTTGATT GAGCTAAGGA CCAAAGCTGG AGATATGGCA GTCGTATACT GCAGAAAAGC AGTTAGCTAT GGACAAACAA GAATCGCAGA GATCCTGCAT TTTGTAGCTC TCCAGTCAAC ACCAAAACCT CAGCCGAAGG TAAAGAAGCA GGCAGCACCA GAAGAGGAGG AACAGAAACA ACCGGATCTT AAGGCGACGA GCCAAGCAGC TTCTTCTAAT CCTCAAGCAC GTATGCAATC GAAGAAACCA CAGCTTGTAA CCAAAGAACC TATATCACCA AAGCCTCTTT CATCCCCACG TAAGCAACAA CAACTACAAA CAGAGACCAA AGAAGCAAAA GCAAGCGTGT CACAAACCAG ACTCACTACT CTCTCTCCAC CAGTACCACC ACCACCACCA TCACCCTCAA CAGCCATGAA ACCAAACGCT GATCCAGCAC AGCCATTACC AACAGAGGCA GAGCAAGCGT CACAGACTGT TGCAGCGTTA CCACCAGCAG CGTCTGAGAT TCAGCGAGCG ACATCTTCGA AAGAGACTTT AATGGAGGAA ACACTTAGGG TCACTCGTGG GAGTCTGAGA AAAGCTCGTT CTGCGGGAGC ACCGCGCTGA 
Length930
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8112452.. 8113905
Download Sequence
A.thaliana
AGI-codeAT1G19950.1
DescriptionHVA22-like protein H (ATHVA22H)
TAIR curator summary
Alias[HVA22H][HVA22-like protein H (ATHVA22H)]
Gene coexpression
MR
MR Locus Description
17.5784 Ahg472662 MLP-like protein 423
20.347 Ahg477690 Li-tolerant lipase 1
33.5857 Ahg471757 CYCLIN A2;3
33.9117 Ahg317406 Actin-binding FH2 (formin homology 2) family protein
35.0714 Ahg487523 Eukaryotic aspartyl protease family protein
35.0999 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
35.3695 Ahg480193 O-Glycosyl hydrolases family 17 protein
36.1663 Ahg494244 Protein of unknown function, DUF547
44.6654 Ahg927503 Leucine-rich repeat (LRR) family protein
46.2817 Ahg350051 glucan endo-1,3-beta-glucosidase-like protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression