Detail



ID : Ahg313103

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313103|fgenesh1_pm.C_scaffold_1001883
Sequence
ATGTCGGCTA GAGCTCATCC TGTGGACGAT GACGGAGAGA TTTCCCCGGT GGATACATCT TCCCCGCGGC AAGCAAATAC ACCGTATGTC CACAAAGTCG AAGTTCCTCC GAAGCAAAAC CTCTTCAATG AGTTCATGTA CACTTTCAAA GAAACTTTCT TCCACGATGA TCCTCTAAGG CATTTCAAGG ACCAGTCAAA GTCCAAGAAG CTCATGCTCG GTATCCAGTC CGTCTTCCCG GTTATCGAGT GGGGAAGAAA ATATAATCTT AAGATGTTTC GCGGCGATCT TATTGCCGGT TTAACCATAG CCAGTCTCTG CATTCCTCAG GATATTGGAT ATGCAAAGCT CGCCAGTCTT GACCCTAAGT ATGGTCTATA TTCAAGTTTT GTTCCTCCGT TGGTGTACGC ATGTATGGGA AGCTCAAAGG ATATAGCGAT TGGACCCGTG GCAGTGGTTT CGCTCCTTTT AGGTACTCTG CTTCGGGCTG AGATCGACCC CAACACAAAC CCTAACGAAT ATCTCCGCTT AGCCTTCACC TCCACGTTCT TTGCCGGTGT CACTCAAGCA GCACTAGGGT TCTTTAGATT GGGTTTCTTG ATCGATTTCT TATCCCACGC CGCGGTAGTA GGGTTCATGG GTGGAGCAGC CATCACCATT GCGCTTCAAC AGCTCAAAGG ATTCCTCGGA ATCAATAAGT TCACAAAGAA AACCGATATC ATCGCGGTTC TTTCTTCCGT AATCAGCTCA GCCCACCACG GAGTAAAGAT TCATTCAATC TCTCTGTTTT TAGTTTCTTT CACTCTTTAT GAATACTCAC CGTTTGGTAT CAAATGCTTG CAGTGGAATT GGCAGACAAT ACTCATTAGT GCATCGTTCT TGATCTTCCT TCTCATCTCC AAGTTCATAG GGAAGAAAAA CAAGAAACTG TTTTGGATTC CAGCGATTGC TCCGTTAGTA TCTGTCATCA TTTCAACCTT CTTCGTCTAC ATAACCCGAG CCGACAAGAA AGGAGTTCAG ATAGTGAAAC ATCTTGACAA AGGTCTAAAC CCTTCTTCTT TGCGTCTAAT ATACTTCTCC GGCGATTACC TTCTCAAGGG CTTCCGCATA GGCGTTGTCT CAGGCATGGT TGCCTTGACG GAAGCTGTAG CGATAGGAAG AACATTTGCA GCAATGAAAG ACTACCAAAT CGATGGTAAC AAAGAGATGG TAGCATTAGG AGCAATGAAC GTGATCGGTT CGATGACCTC TTGCTATGTA TCCACCGGTT CGTTCTCAAG ATCCGCTGTC AACTTCATGG CCGGATGTCA AACGGCAGTC TCCAACATCA TCATGTCCAT CGTCGTCCTC TTAACGCTTC TCTTCCTCAC TCCTCTTTTC AAATACACAC CCAACGCAAT TCTTGCAGCG ATCATCATCA ACGCCGTGAT TCCTTTGGTT GACGTTAATG CTACCATTTT GATTTTCAAG ATCGATAAGC TCGATTTTGT TGCTTGTATG GGGGCTTTCT TTGGTGTCAT CTTTGTATCC GTAGAGATTG GCCTTCTAAT AGCCGTGGGG ATATCTTTTG CCAAGATACT TTTGCAAGTT ACGAGACCTA GGACAGCAAT TCTTGGAAAG ATACCAGGGA CTTCGGTTTA CAGGAATATC AATCAGTATC CTGAAGCGAC TAGGATTCCC GGAGTTTTGA CAATTCGTGT TGACTCCGCG ATTTACTTCT CCAATTCCAA TTATGTCAGG GAAAGGATTC AAAGATGGTT GACAGATGAA GAAGAGATGG TGAAAGCTGC AAGCTTGCCG AGGATCCAGT TTCTTATCAT CGAAATGTCA CCTGTTACGG ACATCGATAC TAGCGGGATT CATGCCTTAG AAGACTTATA TAAGTCTCTC TAAAAACGAT ACATTCAGTT GGTTCTAGCG AATCCAGGAC CGCCGGTCAT AGATAAGCTA CACGTTTCTC ACTTTGCAGA CATGTTAGGA CAGGACAAAA TCTTTCTGAC GGTGGCTGAA GCCGTGGATT CTTGCTCTCC TAAACTCTCC GACGAGGTCT GA 
Length2052
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16917660.. 16920599
Download Sequence
A.thaliana
AGI-codeAT1G22150.1
Descriptionsulfate transporter 1;3
TAIR curator summarysulfate transporter Sultr1;3
Alias[SULTR1;3][sulfate transporter 1;3]
Gene coexpression
MR
MR Locus Description
25.923 Ahg482320 Integrase-type DNA-binding superfamily protein
30.7896 Ahg936672 Protein of unknown function (DUF1216)
31.8119 Ahg477955 myb domain protein 108
34.0588 Ahg926758 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
36.9324 Ahg323060 Exostosin family protein
43.1277 Ahg497161 Actin cross-linking protein
44.9778 Ahg477695 Calcium-dependent lipid-binding (CaLB domain) family protein
51.7687 Ahg952263 copper ion binding;electron carriers
60.2827 Ahg487537 Leucine-rich repeat protein kinase family protein
62.2093 Ahg355547 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression