Detail



ID : Ahg313393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313393|fgenesh1_pm.C_scaffold_1002173
Sequence
ATGGGAAATC TGAAACTTGC TTTGATCATC AAGAACCCTA GAGACGACGT TGAGTTCCTG CTCGAGAAGC AAAAACAGCC GGCGAAATTT GGAGATGAAG CTTATGATTC CTTTGTCGAT TCCGATCTCT GGGACTTACC GTCAACAGAT TTACTGGCTT TGGAAGACGG AGTCAGGTCC GGATTTAGTA TCTCTATACT TGAATCATGT TCTGAGGAGG TTGATTTGAT GAATTTCGAC TTCGAATCCA CACTGATTCT GCTGTTGGCG AATTTAGGGA TTGGTATTAG CGATGTAGGA GAGTGGAGAT TTGTCAGGTC TGTAGAAGAG CCTGAGTTTG GACCTGACTC TTGCGTCCGT ACTTGTTTTA TCTCCGGGAA GCTCTTGAAT ACAGATCAAA GTTTACAAGA CAACTGTAAG TGGATGTCCA TGGAAGCATG CTTTGACTCT CTTATAGATG TAAAACCGGG CTGTGATCGT GTTGGACCAT TAGTACTACT TGGACTTGGG GATGGTTCAT GTCAGTCCTT GAAGCAGAAG TTGTCATCTT CTCTGTCTAT CCAGGAATAT CCACCTGGTG TTATGCTTGT GCCAATGCGT AGCAGGACAT TGAAACCTTT CAAGACAACA AATTTGGTTG TGTTTGCTCC AGAAAATGGT CCAGGGGATC ATCAAGGGAC TGATTTTGTA GCTCATGGGG ATGCGTTGAT AGTGGATCCT GGATGTCTCT TCAAACTCCA CGTTGAGCTC AAGAAAATCG CTGATGCTTT ACCTAGAAAG CTAATTGTCT TTGTTACACA TCACCATCGA GATCACATTG ATGGTCTTTC TGCTATACAA GAGAGCAATC CTGATGCTAT TTTAGTGGCA CATGTTAAAA CTAGGCATCA CATTGATGGT TGGTCTGGTA ACTATACCCC AGTTTCTGGA GGAGAAAACA TCTATGTCAA TGGTCATAAA TTGACCGTCA TTTTTGCTCC GGGGCACACA GATGGCCATA TGGCACTACT TCATATCTCC ACTCAATCTC TGATTGTTGG TGATCATTGT GTTGGTCAAG GAAGTGCTTT CTTGGACATC AGGGGAGGTG GTAACATGAC AGATTACTTT CAATCGACAT ATAAATTTCT GGAGCTTTCT CCAAATGTGG TGATTCCCAT GCATGGAAGG GTCAATTTGT GGCCGAAACA CATGCTTTGT GGATATCTCA AAAACCGCAG AAGCAGAGAA GAATCAATCC TAAAGGCCAC TGAGGATGGA GCTCAGACGT TATATGACAT TGTTGCTAAC GTGTACTCAA GTGTGGATCG CAGATTCTGG TGGGCTGCAG CATCAAACGT TAGGCTGCAT ATCGACAAGC TGGCTGTAGA AAACAAATTA CCAGAGGGAT TCTCAATCCG AAAATTCAAA GCAAGTTGCG GAATGTGTTT TGCGATACGG TGGACAGTGG GTTATATCAG AAGCAAGATT CCGTTCAAGA TCAATAAGCC AGAGAAAGAG ATTGATTCGT TCCTTGTTCT TTGATCGATT AGAGTAAGTG CACCAGAATC AATGGTATTT CCCGGTGAGA TGGCGGCGAC GACGACGACG AGACCTGAGC AACGATCGAA GACTCTTCAC AATTTCCCTC TCCCGAACTT ATGGGGGAAT CAGAGACATC TCAAGTGCAT GAAGATCGAC TCTATCAGCA ACGGAGGTTC CGGCGATCAC CGACTACGAC GCCGATCTCC GCCTTTGAAA TTCGCTGATT CTTCCGTCTC GATCCCGTTT CGATTCGGAA ACTCCGATCA TCGTCGACCG TTTAAATCGG GAAGCGAAGA AGGGATCGAA GAGTTCAGGG TGAAGATTAT GTCGGATCTG AAGACGGTGA GAGATAAGAT CACACAATCG ATGTTTAACA AAGACGTAAT CGAAGAGGAA GAAGAAGAAG ATATCGACGG TTCTGGTTCC GGTCAAGAGA AGGAGGTTTC TCCGGTGAAG CCATGGAATC TAAGGAAGAG AAGAGCAGCG TGTAAGGAAC CGGAATCCAA CAGTTTGAAT CATCAAATCT ATAAAGGATT TGTAATTGAG GAGAAGATAG TGAAGAATCA TCCATCTCCG GTGAGAGGCG GCGGAGTGGT CGAAGCGGAG GCGACGAAGA AGATGCGAGT TAAGTTCTCT GTGAAGCTAT CGAAGAAGGA GATCGAAGAA GATTTCATTG GGATGTTAGG TCACCGACCA CCGCGTCGGC CCAAGAAACG GCCCAGAACT GTTCAGAAAA AACTCGATAG TTTGTATCCT GGATTGTATT TGACTGAAGT GACGCATGAT GCATATAAGG TTCCAGAAGA AACCAAGGTA TAA 
Length2343
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11057387.. 11062247
Download Sequence
A.thaliana
AGI-codeAT1G25375.1
DescriptionMetallo-hydrolase/oxidoreductase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.91608 Ahg485317 ubiquitin-specific protease 26
10.3923 Ahg489361
17.4069 Ahg927919
21.5407 Ahg934405 conserved peptide upstream open reading frame 52
42.7551 Ahg928023 Malectin/receptor-like protein kinase family protein
44.0227 Ahg478603 nuclear factor Y, subunit C11
44.2493 Ahg496324 phosphofructokinase 4
49.1121 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
49.3559 Ahg943129 Copper amine oxidase family protein
51.2152 Ahg313276 transmembrane receptors;ATP binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression