Detail



ID : Ahg313816

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313816|fgenesh1_pm.C_scaffold_1002596
Sequence
ATGTCTTGCC TAGAGATTTA TAACAAAGAC ACAATGAAGA AGAAAGAAGA AGAAGAAGAA GAAACAAGAG ATGGAACAGT GGATTACTAT GGTCGTCCCT CTATTCGTTC TAACTCAGGC CAATGGGTTG CTGGCATCGT CATTCTCCTG AACCAGGGGT TGGCGACACT AGCCTTCTTT GGAGTTGGAG TGAATTTGGT GCTCTTCCTA ACGCGCGTTT TGCAGCAGAA TAACGCAGAC GCAGCGAACA ACGTTAGCAA ATGGACAGGG ACTGTTTATA TCTTCTCATT AGTTGGAGCG TTTCTCAGCG ATTCGTATTG GGGTCGTTAC AAGACTTGTG CTATATTTCA AGTCATTTTT GTCATTGGAC TTTCATCGCT ATCGCTATCA TCGTACATGT TCTTGATTAG ACCACGAGGT TGCGGGGATG AAGTCACTCC TTGTGGTTCG CATTCCATGA TGGAGATCAC AATGTTCTAC TTTTCGATCT ACTTGATCGC ATTGGGATAT GGCGGTTACC AACCAAACAT TGCAACGCTT GGAGCGGATC AATTCGATGA GGAGCATCCT AAAGAAGGGT ACTCAAAGAT TGCGTTTTTC AGCTACTTCT ACCTTGCTTT GAACCTCGGA TCACTCTTTT CAAACACCAT CTTGGGGTAT TTTGAGGATG AGGGAATGTG GGCACTTGGG TTTTGGGCGT CCACTGGTTC TGCTATCATT GGTTTGATTC TTTTCCTCGT TGGAACACCG AGATACCGAT ATTTTATGCC CACCGGGAAT CCTCTTTCGA GGTTTTGCCA AGTTTTGGTC GCTGCAACGA AGAAATCATC GGTGGAGGCG CCATTAAGAG GGAGAGAGGA GATGTATGAT GGAGACAGCC AAGGGAAAAA TGTTTCAGAA AATACAGGGA GAAGGATAGT GCATACCGAT GAATTCAAAT TCTTGGACAA AGCAGCGTAC ATCACAGCGA GAGATCTTGA TGACAAGAAA CAAGACGCAG TTAATCCGTG GAGGCTCTGT CCGGTGACAC AAGTCGAGGA AGTCAAGTGC ATTCTTAGAC TGATGCCAAT TTGGCTCTGC ACTATAATCT ACTCAGTCGT CTTCACCCAA ATGGCCTCTC TATTTGTGGA GCAAGGCGCT GCAATGAATA CCTCTGTCTC GGATTTCAAA ATCCCCCCTG CAAGTATGTC CAGCTTCGAC ATCCTTAGTG TCGCTTTGTT CATATTCCTA TACCGCAGAG TTCTCGAGCC AGTAGCCAAC AGATTCAAGA AGAACGGATC AAAAGGAATC ACCGAGCTTC ACAGGATGGG AATCGGACTT GTTATTGCTG TCATAGCTAT GATTGCAGCC GGAATTGTGG AATGCTATAG GCTAAAGTAC GCAGACAAAA GTTGCACTCA CTGTGATGGC TCAAGCTCCT TAAGCATCTT CTGGCAGGCT CCACAATACT CACTAATTGG GGCATCAGAA GTGTTCATGT ACGTGGGTCA GCTTGAGTTC TTCAACGCGC AAACACCAGA CGGACTAAAG AGCTTCGGGA GCGCTCTGTG TATGATGTCA ATGTCAATGG GAAACTTTGT GAGTAGCTTG TTGGTGACAA TGGTGGTGAA GATCTCTACA GAGGATCACA TGCCTGGTTG GATTCCAAGG AACCTCAACA AAGGTCACTT AGACAGATTC TATTTCCTCT TGGCTGCGTT GACCGGCATT GACCTGGTGG TATATATTGC CTGTGCAAAG TGGTACAAAC CTATAAAACT AGAAGGAAAA GATGAGATGC AAGACATGAG TGATGATGAC GATGACACCG AGAGCGAAGA GGAACGAGAG AAGGATTCTA AAGTCTAA 
Length1848
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14089670.. 14094115
Download Sequence
A.thaliana
AGI-codeAT1G32450.1
Descriptionnitrate transporter 1.5
TAIR curator summaryTransmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.
Alias[NRT1.5][nitrate transporter 1.5]
Gene coexpression
MR
MR Locus Description
6 Ahg330043 Chlorophyll A-B binding family protein
7.74597 Ahg930279 Chlorophyll A-B binding family protein
10 Ahg950020 Tyrosine transaminase family protein
19.1311 Ahg924738 flavin-monooxygenase glucosinolate S-oxygenase 4
20.6398 Ahg474411 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
22.1359 Ahg477094 evolutionarily conserved C-terminal region 8
22.6274 Ahg952470 delta1-pyrroline-5-carboxylate synthase 1
22.7156 Ahg489269 sigma factor E
23.8118 Ahg495066 Putative thiol-disulphide oxidoreductase DCC
30.1993 Ahg495493 Calcium-binding endonuclease/exonuclease/phosphatase family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression