Detail



ID : Ahg314643

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314643|fgenesh1_pm.C_scaffold_1003423
Sequence
ATGTTTTTAT GGATCGAATT ATATCAGAGG GGTTCTGCAG CAAGCGAAAT GGGACAAAGA AATAGGACTG TTGATTTAGA AATGGAGCAG CAGCAATCTC AAGCTTCTCT CCAACCAGAA CCTTGCATCC TTTTAGGCAG CTTTCCGCAA CAACCGGATA ATAATAATAT CCCTGCCATG GTTGCACACA TTCCTAATTT AGAAGCTCAT TCTCTTCAAG ACCCAACATA TGACAACTCG GCAATGTTCT ACGGGCTTCC TCAGTACCAT CATCATCCTC ATCAGCGTGC TCCAACGAAT TTCTATGTTC CCTATGTGGC ATTTCAGGCT CCTCCGGGTC AGTTACCATC TTCAAGCAGT CACGGTGTGG TTGGAGTAAG TCCTGATCAT GAATACGAAA GAAATGCTCA TTTTATGGAT CACACAAGAG GGACATATAA ACGAAAAAAC GCTGAAGGAA TACCCGGACA ACCTCAATAT TTAAGTACCT TAGCAGCCCC ATTCAACACA CCGGAGACAA TAGCACCTTT TGTAGGCGCT AGGAACAGAC CAGGAGCTGT TACAGTGAAC CCTGTTCTTC CTCCTCATGC TCCAAACAAC TTCATTCAAG GAAACTATGC AGGTCATCAT CCTTTTCCAC CTCCTGGATC AATCTGGTAT GATCAACACC ACGGCAGATC TGATGGCTCA CCTTCGTTCT GGCCCACACC TTACATGCAC GGTAGTAACA TTGTCGCTGG TTCCATAGAG TCTAGTAGCA GAAACCCTAC ATCATTTATG TATCCTTCTC AGTTAAACCC GAGGGACCAC TATTATAGTC ATCATCACCA CCCGGCACCT CCTCCTGTAC AAGGCATGAG AGGCCAGAAT GCCACATTAT ATCCTCACAC AGCTTCTTCG GCTTCATACA GAGTTCCTCC AGGGAGTTTT GCTCCGCAGA ACACAATGAA TAGTGGTCCC TCGGGCTCAG AGATGGGTTC GAGTCACATG GGTCTGGTTC AACCAACCGG GTTTCGGATA TACCAGCATC ATCAGCGAGA TGATTCTGTA CCTGTAGCAA CTCTTAGACA ACACCGTGGA GGAGTTCCTC GGCTTAGAGT GATGCCTGAT GATGAAGTTG CACTTTTGGA GTTTGGAGAC TTCCTTGGTG GTTCTGGAAA TAATCACATT GATCATCATC GAGATATGCG ATTGGACATC GAGGAAATGT CTTACGAGGA GCTTCTTGCT TTGAGTGAGC GAATCGGAAC AGTAAACACT GGTTTGCCAG AGGAAGATGT TAAGAATCAT TTGAAAACAA GAACATGTTC TGGAATCAAC CTTGAAAAAG AGTCGTCGTC TCCACGAACT AAAGATTTAG AAACTGAACC GTGCACGATA TGTCAGGAAA GCTTCATGAA CGAAGAAAAG ATTGCAACTT TGGATTGCGG GCACGAGTAT CATGCAGAGT GCTTGGAGAA ATGGCTGATT GTGAAGAACG TTTGCCCAAT CTGTAAATCA GAAGCACTGG TCATGGAGAA GAGAAAGGTA TAG 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26997318.. 26999297
Download Sequence
A.thaliana
AGI-codeAT1G53190.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg496927 C2H2-like zinc finger protein
13 Ahg907209 transcription factor jumonji (jmjC) domain-containing protein
19.3391 Ahg481265 Protein of unknown function (DUF295)
31.241 Ahg496460 Protein of unknown function (DUF1645)
31.305 Ahg949481 Predicted AT-hook DNA-binding family protein
38.7943 Ahg496745 plant U-box 38
41.5812 Ahg931278 RING/U-box superfamily protein
55.4437 Ahg336766 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
57.0789 Ahg895324 cysteine-rich RLK (RECEPTOR-like protein kinase) 34
63.561 Ahg479013 DNA photolyase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression