| Annotation |
|---|
| Description | jgi|Araly1|314800|fgenesh1_pm.C_scaffold_1003580 |
| Sequence |
ATGCGCCGGC ACAAGCGATG GCCTTTGAGG CCTCTCGCCT GCAGCTTCAG CTCCTCGGCG GCGGAGACAG TTACTACTTC AACGGCTGCT TCGGCGACGG CGGCTTTTCC GTTGAAGCAT GTAACGAGGT CGAACTTCGA GACGACACTG AATGATCTGC GTTCACTCGT AAAGGCTGCG GATTTCGTGG CGATTGACCT TGAGATGACT GGTGTGACAA GCGCTCCGTG GCGTGACTCA TTAGAGTTCG ACCGCTACGA CGTCAGATAC CTCAAAGTCA AAGACTCCGC CGAGAAATTC GCCGTCGTTC AGTTCGGCGT CTGTCCCTTT CGCTGGGATT CTCGAACTCA GTCATTCGTT TCTCACCCGC ACAATTTCTT TGTATTTCCT CGTCAAGAGC TCACATTTGA TCCACCAGCT CATGAATTTC TCTGTCAGAC AACATCAATG GATTTTCTTG CCAAGTATCA GTTTGATTTC AATACCTGCA TACATGAAGG AATATCTTAT TTGTCCAGAC GACAAGAGGA AGAGGCAAGT AAGCGTTTGG AAATGCTACA TGGCGAGGAG GGAATTGATT CATCCGGTGA AACTGAAGAT TTAAAGTTGG TGCGATTGGC AGATACTCTT TTCGCTGTAA GGATGGAGAA AATGCTGAAT GAATGGCGGT CTGGCTTGTT ACACGGTGGG AATGCGTCCT CTGAGTTTCC GAGGATCTCA AATGGTTCGA CTCAGAGTAT GGAAACTGTG TTTCACCATA TGCGTCCAGC TCTCAGTCTG AAGGGTTTCA CTTCTCATCA GCTCAGAGTT ATTAACTCGG TTTTAAGAAA GCATTTTGGA GATCTTGTGT ACATACATTC AAATGATAAA GATTCCTGTT CACAAGGCTT TGTTGTCTAT ACTGATTCAG AATCCGACAA GGAAAATCTC ATGAAGGAGG CAAAGGATGA ACGCAAGAGA TTAGCAGAAA GAAAAATACA ATCTGCAATC GGGTTCCGTC AAGTGATTGA TCTGCTTGCT TCAGAGAAAA AGTTGATTGT TGGTCACAAT TGTTTCCTCG ATATTGCACA TGTATACAGC AAATTTGTGG GTCCTCTTCC TTCAACAGCT GAGAAATTCG TCGCCTCCAT TAACAGTCAC TTTCCTTACA TTGTTGACAC CAAAATACTC TTAAACGTGA ATCCAATGTT GCATCAGCGG ATGAAAAAGT CCAGTACATC ACTATCTTCT GCGTTTTCCT CGTTATGTCC GCAAATCGAG TTTTCTTCAA GAAGCTCTGA CTCGTTTCTT CAGCAGCGTG TCAATATTGA TGTTGAGATA GACAACGTTA GGTGTTCTAA CTGGAATGCA GGAGGAAAGC ACGAAGCTGG TTATGATGCT TTCATGACAG GTTGCATCTT TGCGCAGGCA TGCAATCATC TCGGTTTCGA CTTCAAACAG CATTCGCAAT TAGATAACTT TGCCCAGAAC GAGAAACTTG AAAAGTACAT CAACCGTCTT TATCTCAGCT GGACAAGAGG TGATATCATC AACCTTCGAA CAGGCCATAG TAATGCAGAT AACTGGCGAG TCTCAAAGTT CAAATACGAG AACATTGTCC TCATCTGGAA CTTCCCACGA AAACTTAAGG CTAGAGAGAT CAAAGAATGC ATATGCAAAG CCTTTGGCTC TGCTTCTGTC ACCTCGGTCT ACCATGTGGA TGACTCTGCG GTTTTTGTCT TGTTTAAGAA CTCAGAACTC GTCTGGGACT TCTTAACGCT CAAGCGGGAG CTGGAGTCAA CCGATGGTCC AGTTTCGGTT CTTCACCCTT TATCCAAGAT CCTCGAAGGA GGAAACACTG GAGCTGCAGA CTACGAAGCT TACAAAGAGA TTTGCAGCTC AAACATCTCA AAGATCCTAT TCTCTGACCA AGCTGAAACA GTTGGTGTCA AATCAAGAAC AAGACCGGAC CCACAAGGCG AGACTGAGAG AAGAGAGGAG AACACAGTCG CTGTGACTCA CAAAGCATCG GATTTGATCG ATGCGTTTTT GGCCAATAGA GAGGAAGTCG AAACTGCTAC GACTAATTAA |
| Length | 2070 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 28083353.. 28086077 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55870.1 |
| Description | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| TAIR curator summary | Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA. |
| Alias | [AHG2][ATPARN][ABA-HYPERSENSITIVE GERMINATION 2][ARABIDOPSIS THALIANA POLY(A) RIBONUCLEASE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.74597 |
Ahg483128 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 16 |
Ahg494611 | transducin family protein / WD-40 repeat family protein |
| 24.2693 |
Ahg477122 | Pentatricopeptide repeat (PPR) superfamily protein |
| 24.7184 |
Ahg479780 | rRNA processing protein-related |
| 37.3095 |
Ahg940355 | DEA(D/H)-box RNA helicase family protein |
| 41.497 |
Ahg942897 | mRNAadenosine methylase |
| 45.9565 |
Ahg930087 | RNA methyltransferase family protein |
| 52.5452 |
Ahg471138 | glutamine-rich protein 23 |
| 53.8981 |
Ahg942536 | Transducin family protein / WD-40 repeat family protein |
| 57.4891 |
Ahg923204 | DEA(D/H)-box RNA helicase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|