| Annotation |
|---|
| Description | jgi|Araly1|315184|fgenesh1_pm.C_scaffold_2000217 |
| Sequence |
ATGAATCATC AGAGGAGTAA ATTTGCTAGG AATTTGGGGA GTTCTGTTGA TGGAAAAATC AAAAGTGTTA GAGGAGGCTT GAAGAAGTTT TATCAGAAGA TGAAAACACT GAAAAACTGG AGGAAGACTG TCTTGTTAGC TTGCGTGGTT GATTTGGCTA TTGATCCTTT GTTTCTCTTT ATCCCTTTGA TTGATTCTAA TAAATATTGC TTCACTTTCG ACAAGAAACT TGCAGTAGTA GTTTGTGTCA TTCGTACTTT TAGTGACACA TTCTATGTGA TTCACATCAT TTTTCATCTT ATAACCGAGA TCATGGCTCC TCGTCCTGAA GCATCTTTTA GAGGCGAGAT TTCCGTGCAT TCTAAGGCTA CACGGAAAAC ACGTCACCTC TTTCAATTCA TTGTTAACAT TTTCTCTGTT CTCCCCATTC CTCAGGTGGT GGTTCTCACT CTCATTCCAC GGTCTGCCTC GCTAGTGTCA GAGAAAATAC TGAAATGGAT TATACTTTCT CAATTGTTAC CAAGAATCAT TCGTATGTAT CCGCTTTACA AAGATGTGAC AAGAGCCTTT GGTACGGTAG CAGAATCAAA GTGGATTGGA GCTGCTTTAA ACCTTTTCCT TTACATGCTG CACAGTTATG TGTTTGGGGC TTTTTGGTAC GTGAGTGCAG TAGAAAAGAA AAGCAAATGT TGGCGTGACG CGTGCGCTAG GACATCCGAC TGCGATCTCA CGAATCTGCT TTGTGGACGA GGTGGCAGAG ACAACAGTCG TTTCCTTAAC ACTTCATGCC CCTTAATCGA CCCTGCCCAA ATCACAAACT CCACAGACTT CAACTTTGGT ATGTTCATTG ATGCATTGAA GTCAGGGGTG GTAGAGGTGA AACCAAGAGA TTTTCCGAGG AAATTCCTCT ATTGCTTTTG GTGGGGTCTC CGTAATATTA GTGCTTTGGG CCAAAACCTG GAGACAAGCA ACTCTGCAGG GGAGATTTGT TTTGCTATCA TCATATGTGT CTCTGGTTTA CTCTTGTTTG CTGTGCTCAT TGGAAACGTT CAGAAGTACT TGCAATCATC AACGACTAGA GTAGATGAAA TGGAGGAGAA AAAGAGAGAC ACAGAAAAAT GGATGTCCTA TCGGGTGATA CCACAGTATT TGAAGGAACG CATTAGGAGA TTCGAAGATT ACAAATGGCG AGAAACCAAA GGCACCGAAG AGGAAGCTCT TCTTCGTAGT CTTCCAAAAG ACCTCAGACT CGAAACCAAA CGCTATCTTT ACTTGGATAT GTTAAAGCGT GTTCCATGGC TTGACTTCAT GGATGATGGT TGGCTACTAG AAGCTGTGTG CGACCGGGTG AAGTCTGTGT TCTACTCAGC GAACAGCTAC ATAGTGAGAG AGGGGCACCC AGTTGAGGAA ATGCTGATTG TAACTAGAGG CAATCTGAAA AGTACAACCG GATCTCATGA AATAGGTGGC CGCTACAATT GTTGTTACCT CCAAGCTGGT GACATATGTG GAGAACTTCT CTTCAATGGT TCTCGCCTTC CCACCTCAAC TAGAACCATA ATGACTCTGA CTGAAGTTGA AGGCTTCATT CTCTTGCCTG ATGATGTCAA TTTTATAGCG TCTCATTTAA ATGCCTTTCA ACGACAGAAA CTCAAACAAA CATTCAGGCA AAAATGGCGC TCATGGGCGG CATTCTTCAT TCAAAGGGCA TGGAGGGAAT ATTGCAAAAG GAAGCTTTCT AAGATCTTAC GCGCCAAAAG AGACAACGAG AACATTCCAC AAGGCAAGCA ACTCAATCTT GAATCAACGC TCTACGTGTC GAGATTTGTG TCCAAAGCTT TGCAAAATCG ACGGAAAGAT ACAGCAGATT GTTCCACTTC TCTTGATATG TCACCTCCGG TACCTCATAA ACCAGCCGAT CTCGAGTTTG CAAAGGATGA AGCATAG |
| Length | 1947 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 1868751.. 1871261 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G46450.1 |
| Description | cyclic nucleotide-gated channel 12 |
| TAIR curator summary | Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner. |
| Alias | [ATCNGC12][CNGC12][cyclic nucleotide-gated channel 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg943226 | cysteine-rich RLK (RECEPTOR-like protein kinase) 40 |
| 3 |
Ahg478899 | Leucine-rich repeat transmembrane protein kinase |
| 3.60555 |
Ahg943817 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 4.24264 |
Ahg493041 | receptor serine/threonine kinase, putative |
| 6.9282 |
Ahg477399 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 8 |
Ahg934564 | PYR1-like 4 |
| 8.48528 |
Ahg492684 | HSP20-like chaperones superfamily protein |
| 8.48528 |
Ahg314969 | GroES-like zinc-binding dehydrogenase family protein |
| 9.79796 |
Ahg484750 | Methylenetetrahydrofolate reductase family protein |
| 11.4891 |
Ahg907562 | Disease resistance protein (CC-NBS-LRR class) family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|