Detail


ID : Ahg315285

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315285|fgenesh1_pm.C_scaffold_2000318
Sequence
ATGAAAGATA GAGAAAACGA TGGAAATCTT GAGAGCAGAA TCTTCGTTGG AGGATTGTCG TGGGATGTCA CAGAGAGACA GCTTGAGAGT ACTTTTGACC GCTATGGGAA AATCACTGAG TGTCAGATTA TGGTGGGGAA AGATACTGGC CGTCCACGTG GTTTTGGGTT TATTACATTC ACTGATCGCC GAGGAGCTGA TGATGCAATT AAGCACATGC ATGGGAGGGA GTTGGGCGAT AGGGTCATCT CGGTGAACAA AGCTGAGCCC AAAGTTGGTG GAGATGATGT AGACCATTTA CATAAGGGTG GAGGCTACTC ATCTCGAGGG AAGGGAAGCG AGGATGAGTG CTTTAAGTGC GGACGCCCTG GTCATTGGGC TCGAGATTGC CCATCAGCTG GTAGCGAAGG AGGACGGTTC AGAGTTTCCC TTGCGATGCG CTCTAGACTT GGAGAAATCG ATGGACACCG AGATCGCTAT GGAGATCGTG AGCTGGAGCG TGAGCGTGAC CGCTACATGG ATGGACGCCG TGACCGAGAT GGGGGACGAT ATAGCTACAG GGACCGCTTT GAGAGTGGAG ACAAGTATGA GACTCGTGAT CACTATCCAT TTGAGAGATA CGCACCACCT GGAGACCGTT TTGTGAGTGA TAGGTATGGG ATGCCTGAAC ATCATCTTGA GAATGAATAT CGCGGGCGAG AGAGAAGCTA TGACAGGGAC AGATACGCAA GGGATACAAG TGATAGGTAT GGAGCTATGG GACCGATACG TGATGAGGGA AGACCCTATA GAAGCAGACC AGGTCCTTAT GACCGTCCTA GCCGAGCTGG AGGCCGACCT TCGTCATATG AACGTTGGTA G
Length861
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2792864.. 2794916
Download Sequence
A.thaliana
AGI-codeAT1G60650.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
TAIR curator summary
Alias[AtRZ-1b][RZ-1b][AtRZ-1b][RZ-1b]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg331225 ARM repeat superfamily protein
4 Ahg484402 eukaryotic translation initiation factor 4B1
6.9282 Ahg484087 Chaperone DnaJ-domain superfamily protein
18.6548 Ahg313379 Plasma-membrane choline transporter family protein
25.4558 Ahg481406 DNAJ heat shock N-terminal domain-containing protein
32 Ahg357483
35.2987 Ahg323555 Tetratricopeptide repeat (TPR)-like superfamily protein
35.8329 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
36.4966 Ahg490687 Homeodomain-like superfamily protein
41.3521 Ahg479466 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression