Detail



ID : Ahg315481

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315481|fgenesh1_pm.C_scaffold_2000514
Sequence
ATGGAGTTTA CTTTCATGGA AGATGATAAT GGCGACGAAC TCTTCGACCT TGCCAAAGAT TACTTCAAAG ATGGAGATCA CATCAAGGCC TTGGAGGTAC TTGAAGATTT GTCTTTAGAT CAAGGGAATG ACGATCCCGT GGAGGGAATT CATGTTAATT ACTTTCAAGG TACAATCTTT AGGGAACTAG CGGGAGATTC AGAGAACAAT GATGTGAAAG TTACTTACTT GTTGGCTTCT GTTGAATGCT ATTCCAGAAA TCTCGGGTTA TCTGCGTTTT CGGCTGGTAC ATTGTTCCTT TTGGCTCAAC AGATTGAGTC AGTCTTGTAT TACAAGCAAT CTGTGCGTAA AGCAAAAGAA GGTTTATATA AAGCAGTGAG TATGCAGGAA GGAGAGTCAG TGAACAAGGA AAGGGAAGAA CTGATGAGTA TAATCGAACA TGCAGAGTTA AGGATCGCTG ATTCCAAGAC TCGTGTTGAT TCTCCTGTAG AAAACTGTGA ACAACAAGTT AGGGAGTCAA AGGAAAATGG GGAGACAAGG AAGAGTGAGC CTGATTTGTT TAAAAGGTTG AGGTCGTATT GGGCGGGTTT GAATGTTGAT ATCAAAAGGA ACTTTATGAA AGTAAGCACT GCAGAACTTA GGAGCTATGT CGAGGGAATA TATGGCACAG GGGGACGAGA TGCTTTGGAG CAAGTTCTAA GTTCTGCAAA GGAAGACAGA AAATGGAGAT TTTGGTTTTG TCGAACATGT TCGGTGAAGT TCTCCAGTCC TGAAGAATGT AAGAGTCATT TTGAACAACA ACATGCAGCA GAATTTAAAC CTTCTTCGGC AAAGCATATT ACTAAGAGGA TAAGTAAAGT CTGGACTCGT AAGATATTGG TTGGAGGTTG GGATCCAGTT GATGCAGTAG CTGCCATTAA AATGATTAAG AATCGGCTTG AAGATGTGAA AGCGTTTGCA TATGAGAATG GATGGTCTAA AGACTGGCCT TTAGCTGCGG ATAAAGAGCG CAGTGAGTTA CTCAAGGAAA TCCAGTCGCT CCTTCTGTCG TTTTGTGACC AGAAAATTCT CTCCTGTAGC GTTCGAGACT GGGTGATGCA TTTTCTTGTT CAGCATCTTG AAAACCTTGA AGTTTCCAAA CATATTCTTA CCGATTGTCG CCTAGTAGAA ACACCTCAGA GTATCTGTTT TTTGGAATGT GGTGAACTCA ATCAAATCCT GGATTTTCTA AAAAACATCA AGTGTGAAAG AGACGATGGT ACAGATCTAG TTTGCAGAGC AGTGGACAGT TTCTATGCTG GTACTCGAGT TAAAGAAAAG ATCGACTTTG ACCCTCAGTT TTCATTTCTG CTCCTGGATA AGAGACTGCT CCAATGCAAG ATTGCTCGAT TCGATGACGA AGGGATAATC AATGTTTTTG ATCACAATGT TCACTACGCT AAGGCACATG CTCAGGGAGA TGATATCTTA TCCTGGTTAT TCGACAAATC TTCACAAGAT GAGAGTATTC CGTTTCCCAC ACCTATCAGG GCACACAATC TTGATATTTG GATAGCTGTT TTGAGAGCAG TTCAGTTCAC GTGTAGGACT TTGGGAACCA AATATGCAAA GAAATTGCAA TACCTAGATT ATGATGCAGC TCTTACTTGC GCCAAGAACT TGTGTATTAG CGAAGATGTG AAGAGAAAGA ATCTTCAGAA AGATCATTGG AACAGTTATG CATCTCTTTT ATGCAAAAGA TGTAAAGAAA GAGATGCCGG AGATTCTCTC ACTACAAAAG CTTTCTTGTG TGTAGTACGA GATGTTCTCA AAGGAGCATC GTATCCGACA TTGGATTTCC CCGATTTAGA AGATTACTTG ACTGTTATAC ATGGGAGTAC AAACCTCAGT GATGAATTAG TGTTGAAGTC CCTAGACCTT CTGAAATTTG TGGTCAACTT ACTGGTTCCT CTAATTGATT CAAAGATTTT GCTTATTGAA AATTCAAGGA TTAATTTGCT GAACGGTCTC ATCAGACTTT CTGTTTTTGA CTACCGCTCT TACATTGGTC AACCAATGAA AGAAGTCATG CTGGATAGAA TTTTAGATAT GGAATCCAAA GCCAAGGCAG CCGCAACAGA AGAAGATATT TCACTCGAGA AAGAAGCAGA TATTTTATTC GAGAAAGAAG CGGAGGAGGA GAAGAAATTA CAGTCAAAGA AGAAGAAGAA GAAAAATAAA AGCAACAAGG TTTTCTCAGC AAACGTATGC TTACATATGT CCAGTGAATC TTCTGTCAAC CTTGAACCGG GTGTTACTTC TCCATTACTA AAAACGGCGG AAGAAGACTC TATGGAACCA GAAGATACTT TTTCAAGTGA AAGTGGTCAA ACTTCACTCA ACACTATCAA TCAAGAGGAT GCTACTAAAG ATATGGAAAA CATGCCTGGA GAAGATTCAT TCTCAGAACA TTTGGAGTTT GCACACGGAA AAGCTGCAAA CAGATACCGT TCAGCTCTTG ACATGACGCT TAAGGCCCTC TTGAACATTA AGGCTCTTGA AAAGGATTTG GTGTATAATC GGCAACCATT TCATGGCAAC TTGGAAGAAC AAGTTCCTTA TGCACTGCAA GATTTCTTTT CTGCTTTTGT GTCGGAACAG ATAACAGAAA AGGGACTGTA CAATTACCTA CTGAGAAACA TATTTGCTTC GTTAGAAGAA ATTCATTCCA TGTCAAGTGA TGCTGCTGGG GTAGTCGTCG CGATCCTTCA GTTTTGTCAT TTCTGGAAAA GTCCAGAAAG AGAAAGCTTG GTTACTCGCC TTTTTACGTT GGAGGAATAT GAAAGAATGA GTTGTAGAAA ATGCAGAAGG AAGCCAAATT ATCCAGAGCA AAGTTCGTAT GGAATTGTCA TGGCTGCAGA TTCAATCGTA GACCTGAAGT GTGCTTTGGG GAATATAAAA TTTGAGGACG TCCTTAAAGT GATCCGCATG GAAGATGAAA TGATGTGTGA TGTTAAAACA GGAGGCTGTG GAACGACGAA CTTTGTTCAC CACACTATAA GTAGATGCCC GCCTATCTTC ACAATTGTGT TGGAATGGGA GAAGAACGAA ACTGAAAAAG AAATATCTGA AACAACAAAT GCTTTGCACT GGGAGATAGA TATCAGCATG TTATACGAAG GCTTAGAACC AAACACTAAC TACCGGCTTG TGTCAATGAT TGGATGTGTT GAAGAAGGAG AATATATTTG CATGGCCTAT ACAAAAAACC AGTGGGTCAG TCTCAGACAT GAAACTTTAG CAGAAGAGGT TGTTGGTAAC TGGAAGAGTG TGGTCAGATT CTGTGGAGAA AGGAAAGTTC GGCCGGAGAT TCTGTTTTAT GAAGCTACTC GATCCATGGC CTAA 
Length3384
Protein Sequence
Protein Residue
Map Locationscaffold_2: 7767059.. 7771472
Download Sequence
A.thaliana
AGI-codeAT1G65130.1
DescriptionUbiquitin carboxyl-terminal hydrolase-related protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.4408 Ahg934838 Integrase-type DNA-binding superfamily protein
33.6749 Ahg351872 Leucine-rich repeat (LRR) family protein
48.2701 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
57.7841 Ahg494980 sucrose synthase 2
58.0259 Ahg944232 long-chain base1
61.5142 Ahg336503 auxin response factor 14
64.8074 Ahg329709 translocase 11
71.0915 Ahg494053 histidine-containing phosphotransmitter 3
75.8947 Ahg484614
83.4446 Ahg943201 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression