Detail



ID : Ahg315900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315900|fgenesh1_pm.C_scaffold_2000933
Sequence
ATGTTTCCTT CTCTAGACAC CAATGGCTAT GACCTCTTTG ATCCCTTCAA TCCCCCACAA ACAACCATGC TTCCTTCTTT CACCAGTTAC ATTCAAAGCC CTAGTTCTCA CCATCACTAC TCTTCGCCAT CTTTTCCTTT CTCTCCAGAT TTTCTTGACA GTTTTAATGA ATCCTTGTTG ATAAACCAAT TCTTGTTACA GCAACAAGAT GCAGCAGCAA ATGTTGTTGA ATCTCCAAGA AAACTTTGCA AGAAGCTTCA GCTAAAGAAT AATAATGAGA AGTGTGTTGA TGGAACCACC TCAGAACAAG TTCCACGGAG AAGAACGGCC AAGAAAAGGG ACAGACATAG TAAGATCTGC ACTGCTCAAG GTCCTAGAGA CCGGAGGATG AGGCTGTCTC TTCAGATTGC TCGCAAGTTT TTCGATCTTC AAGACATGTT GGGTTTCGAC AAGGCGAGCA AGACGATTGA ATGGCTTTTC TCCAAATCAA AGGGTTCCAT CAAACAACTT AAAGAAAGAG TGGCTGCATC GGAAGGAGGA GGACAGGATG AACATCTCCA GGTTGATGAA AAGGAAAAGG ATGAGACATT GAAGGTGAAA GTCTCAAAGA GAAGAACAAA GACTATGGAG AGCTCTTGTA AGACTAAAGA GTCGAGAGAG AGAGCTAGAA AACGAGCAAG AGAGAGAACA ATGGCAAAGA TGAAGATGAG ATTATTTGAG ACCTCGGAAA CAATTTCAGA TCCTCATCAA GAAACTAGAG ATCAGATCAA GATAACCAAT GGTGAACAAT TACTAGAAAG GGAACATAAA GAACAAGAAT GGAGTCATAC TAATGTGAAC ATGGTTGAGT ATCAAATGGA TTCTGTGAGC ATCATAGAGA AGTTTCTTGG ACTAACCAGC GACTCTAGCA CCTCTTCCAT CTTTGGTGAC TCCGAGGAAT GTCACACAAG TCTTAGCTCA ATAATAGGAA TGACGACACC AAGGGAACAC AACACAACGG TAGATGAAGA GAAAAGCCCT ATTTCATCTT TTTCTCTATA TGATTATCTC TGCTACTGA 
Length1059
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12576055.. 12577205
Download Sequence
A.thaliana
AGI-codeAT1G68800.1
DescriptionTCP domain protein 12
TAIR curator summaryEncodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).
Alias[BRC2][TCP12][BRANCHED 2][TCP domain protein 12]
Gene coexpression
MR
MR Locus Description
5.2915 Virus0706
20.7364 Ahg928754
27.8747 Ahg926435 F-box and associated interaction domains-containing protein
29.1548 Ahg496210 Defensin-like (DEFL) family protein
44.0908 Ahg495130 hydroxysteroid dehydrogenase 1
64.0625 Ahg952264 Acyl-CoA N-acyltransferases (NAT) superfamily protein
72.8286 Ahg889574
76.2496 Ahg944497
80.1998 Ahg348420 SAUR-like auxin-responsive protein family
86.1684 Ahg329757 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression