| Annotation |
|---|
| Description | jgi|Araly1|316517|fgenesh1_pm.C_scaffold_2001550 |
| Sequence |
ATGTTTAGGG GAAAAATATT TGTGTTATCA TTATTTTCCA TTTACGTCCT CTCATCCGCG GCTGGACAAA ATACATCATT TTCTGCGCTT TTTGCTTTTG GTGATTCAGT CCTAGATACC GGCAACAACA ATTTTCTTCT TACTCTTCTC AAAGGAAATT ATTGGCCGTA TGGTTTGAGT TTTGACTATA AATTTCCGAC GGGAAGATTC GGAAATGGAA GAGTTTTCAC CGATATAGTT GCCCAAGGCT TACAGATCAA GAGACTTGTA CCAGCTTATA GCAAGATTCG TCGCATTGAT TCTGAAGATC TTAAAACTGG CGTTTGTTTT GCATCAGGTG GTTCAGGAAT CGACGATCTT ACATCCAGAA CATTGAGAGT TTTATCGACA GGTGACCAAG TAAAAGATTT TAAAGACTAT TTGAAGAAAC TAAAGAAAGT AGTGAAACGT AAGAAAAAAG TAAAAGAAAT AGTTTCAAAC GCTGTGTTTC TTATTTCCGA AGGAAATAAT GATCTTGGAT ACTTTGTCGC TCCCGCCCTT ATACGATTAC AGTCCACAAA TACATACACC AGTAAAATGG TTGTTTGGAC CAGAAAGTTT CTAAAAGATT TATATGATCT TGGAGCGAGA AAATTCGCGG TGATGGGAGT GATGCCTGTG GGATGTTTGC CTCTCCATCG AGCCGTATTC GGTGGGGTAT TCGGATGGTG TAACTTCCTC TTGAATAAAG TTACGGAAGA CTTCAACAGC AAATTGCAGA AAGGTCTTAC AAGTTATGCA GTAGAATATG ATTTTAAAGG TGCAAAGTTT GTTTACGTCG ACATGTACGG TACTCTTATG GATCTTGTCA AAAATCCTAA GGCCTATGGG TTTTTGGAAG CGAGAAAAGC CTGTTGTTGT ATGCCGAATG CAATAATACC ATGCTTCAAT CCAGATAAAT ACGTCTTCTA CGACTTCGCT CACCCTTCCC AGAAAGCCTA CGAAGAAAAC ACTAGAGATG ATTGTTTTTC TTATATGATT AATAAAACAC AGATGTTTTA CAGAGGCAAG ACTTTTGATT CGTTTTGCAT ACAAAACAGG TGGTTCAGCA CTATATATAA GTTTCATAAA TTTCCTCTCC TAGGTTTAGT TCTGTTCCTC GGTCTGACCG GCTCACTTAC TGTCGCCAAT GAGTATGCCT GTTCTAGTAC CGATATACAC TTTACTCGTG CCAATTTCCC TAAAGGTTTC ATTTTTGGTA CCGCCACTGC TGCTTTTCAG GTTGAAGGAG CTGTAGATGA AGGATGTAGA GGTCCAAGCA TGTGGGACGT ATACACCAAG AAATTCCCAC ATAAATGTAA TTATCACAAT GCCGACGTTG CTGTCGACTT CTACCATCGT TACAAGGAAG ATATCAAGTT AATGAAAAAT CTGAACACTG ATGGCTTTAG ATTTTCCATT GCATGGCCCA GAATATTCCC CCATGGTAGG ATGGAGAAAG GAATAAGCAA AGCAGGTGTG CAGTATTACC ACGATCTGAT CGATGAGCTC CTCGCAAATG GTATAACACC ATTAGTTACC GTTTTTCACT GGGACACTCC TCAAGATTTA GAAGATGAAT ACGGTGGCTT CTTAAGCGAC CGCATAATAA AGGATTTCAC GGAGTATGCA AACTTCACAT TCCAAGAGTA CGGTCACAAA GTGAAGCATT GGATCACATT TAACGAACCA TGGGTGTTCA GTCGAGCTGG CTACGACATT GGGAACAAAG CACCAGGACG TTGTTCTAAG TACATCAAAG AACATGGAGA TATGTGTCAC GATGGACGGT CAGGACACGA AGCTTATATC GTGAGTCATA ACATGCTCTT GGCACATGCC GATGCCGTTG ATGCCTTTAG GAAATGCGAC AAGTGTAAAG GTGGTAAAAT TGGGATTGCT CACAGTCCAG CTTGGTTTGA GTCTCATGAG CTCTCGGAAG AAGAGCACGA AACTCCTGTA ACTGGCCTGA TTGACTTCAT ATTGGGATGG CATTTGCATC CGACCACGTT TGGAGATTAT CCACAATCAA TGAAGGATCA TGTCGGACAT CGACTGCCAA AATTCACAGA GGCGCAAAAG GAGAAGTTGA AAAATTCAGC TGATTTTGTA GGAATCAACT ATTACACTTC AGTGTTTGCA TTGCATGACG AAGAGCCAGA TCCTTCGCAA CCAAGTTGGC AGAGTGATTC CCTCGTGGAC TGGGAACCAA GGTATGTGGA TAAATTCAAT GCTTTTGCTA ACAAGCCTGA TGTTGCAAAA GTGGAAGTCT ACGCAAAGGG TTTGAGGAGC CTCTTGAAAT ATATAAAGGA AAAATATGGG AATCCTGAAA TCATGATCAC CGAGAATGGA TACGGAGAGG ATCTAGGCGA GCAAGACTCA AGCCTTGTAG TGGCGCTCTC AGACCACCAC AGAACATACT ATATCCAGAA GCATCTCTTG AGCTTGCACC AAGCAATTTG CGATGATAAA GTAAATGTTA CAGGGTATTT TCTTTGGTCA TTGATGGACA ATTTTGAATG GCAAGATGGA TACAACGCGA GATTTGGGCT CTACTACGTC GATTACAAAA ATAATTTGAC GCGCCACGAA AAATTATCAG CACAGTGGTA CTCGAGTTTC CTCCACGATG GACTGAAAGA GTTCGAAATC GAGCACGAAT TCGAGCACGA TGAGTTGTAG |
| Length | 2700 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 15972116.. 15978217 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G75940.1 |
| Description | Glycosyl hydrolase superfamily protein |
| TAIR curator summary | encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. |
| Alias | [ATA27][BGLU20][BETA GLUCOSIDASE 20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.2665 |
Ahg484096 | RING/FYVE/PHD zinc finger superfamily protein |
| 14 |
Ahg338146 | KNOX/ELK homeobox transcription factor |
| 15.1658 |
Ahg919507 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 20.7846 |
Ahg493853 | Exostosin family protein |
| 21.5407 |
Ahg915525 | |
| 22.891 |
Ahg919270 | Pectin lyase-like superfamily protein |
| 28.9828 |
Ahg494336 | Ca2+ activated outward rectifying K+ channel 2 |
| 30.3974 |
Ahg927040 | |
| 30.7409 |
Ahg472486 | O-fucosyltransferase family protein |
| 32.187 |
Ahg484455 | AP2/B3-like transcriptional factor family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|