Detail



ID : Ahg316675

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316675|fgenesh1_pm.C_scaffold_2001708
Sequence
ATGAAGAACC CAGAAAAACC CTTATTTCTG TTTCTAATTT TAGCTTCAAG CTTAGCATCA ATGGCGACTG CGAAATCCAC AATAGAGCCT TGCTCCACTA AAGACACTTG TAACTCATTG CTAGGCTACA CGCTCTACAC CGACCTCAAA GTCACAGAAG TCGCTTCTCT CTTCCAAGTA GACCCAGTCT CGATGCTTCT CTCTAACTCC ATTGACATCT CTTACCCAGA CGTCGAGAAC CATGTCCTTC CCGCTAAGCT CTTCCTCAAA ATCCCAATCA CTTGCTCCTG TGTCGACGGA ATTCGAAAAT CCCTCTCGAC CCATTACAAG ACTCGTACTT CCGACACGCT AGGATCGATC GCTGACTCTG TTTACGGTGG TCTGGTCTCT CCGGAGCAGA TTCAGGTCGC GAATTCGGAA ACTGACCTCT CGGTTCTCGA TGTAGGTACA AGGCTTGTGA TTCCATTGCC TTGCGCTTGC TTCAATGGTA CCGATGAATC TCTTCCGGCG CTTTATCTAT CTTACGTTGT GAGGGGAATC GACACAATGG CTGGAATCGC AAAGAGATTC TCGACCACTG TTACGGATTT AACAAATGTG AATGCGATGG GAGCTCCTGA TATCAATCCT GGTGATATCC TCGCTGTCCC ATTGCTTGCT TGTAGTTCAA ATTTCCCCAA ATACGCTACG GATTACGGAT TGATCATTCC AAACGGAAGC TATGCTCTCA CCGCAGGCCA CTGTGTACAA TGCAGCTGTG TTCTCGGAAG CCGCAGTATG TATTGTGAGC CTGCTTCTTT AGCAGTCTCT TGTTCCAGTA TGCGATGTAG AAACAGCAAC TTCATGCTCG GGAACATCAC TTCGCAGCAG AGTAGCTCGG GTTGTAAACT TACTACTTGT AGTTACAACG GTTTCGCTAG CGGCACTATC TTGACCACGT TATCCATGTC TCTTCAACCT CGATGCCCTG GACCGCAACA ATTAGCACCG CTTATAGCCC CGCCTGATAC TGTTCCAAAG GAACTGATGT ATCTACCTTC ACCTTCACCT TCGCCTTCAC CAGAGTTTGA TGATATTGTT GGTGGAGGAT CATCCATAGC CGCAGTCCCC GCGGCTTCAC CCAGGGGACC CACGGTTTCT TCAAGCAGTT CAATACCGGG CAATCCAGCT AATGGTCCAG GCGGGAGTAT TTCTATAGCT TCTTGCCCAT TGAGCTATTA CTCATTCATT GCGTTTCTCA TCTCCATTGC TTCTTGCTCT TTTGTTTTCT TAGTTTGA 
Length1278
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16725454.. 16727152
Download Sequence
A.thaliana
AGI-codeAT1G77630.1
DescriptionPeptidoglycan-binding LysM domain-containing protein
TAIR curator summary
Alias[LYM3][LYP3][lysin-motif (LysM) domain protein 3][LysM-containing receptor protein 3]
Gene coexpression
MR
MR Locus Description
16.9411 Ahg480193 O-Glycosyl hydrolases family 17 protein
18.3303 Ahg490375 Minichromosome maintenance (MCM2/3/5) family protein
21.166 Ahg938360 Eukaryotic aspartyl protease family protein
22.1133 Ahg480107 FASCICLIN-like arabinoogalactan 7
28.931 Ahg494701 Leucine-rich repeat protein kinase family protein
29.2746 Ahg951320
30.4959 Ahg906774 Minichromosome maintenance (MCM2/3/5) family protein
31.3688 Ahg908883 DEA(D/H)-box RNA helicase family protein
35.242 Ahg943828 Pathogenesis-related thaumatin superfamily protein
35.7211 Ahg472662 MLP-like protein 423
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression