Detail



ID : Ahg317988

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317988|fgenesh1_pm.C_scaffold_3001004
Sequence
ATGGCAGACA AGCTCGTAGC TGACAAGCAT GTTCGTTACA TTCTGATGGC AGAAAAGAAA AAAGAGAGTT TTGAGTCTGT TGTGATGGAT CACCTGAGAA TGAATGGTGC ATATTGGGGA CTAACCACAC TAGATTTACT CGACAAGCTT GGTTCTGTTT CTGCGGTGTG TGGCTTTGCC GGTAATACTG GACATGATCC GCATGTTATA TATACACTCA GTGCTGTACA AATCTTGGCC CTCTTTGACA AACTAAGCAT TCTTGATGTC CAAAAAGTGT CAAGTTATAT TGCTGGGTTA CAGAATAAAG ATGGATCCTT CTCAGGAGAT ATGTGGGGCG AAGTAGATAC AAGGTTTTCG TACATAGCTA TATGCTGTCT CTCAATATTA AAATGTCTTG ATAAGATCAA TGTGGAGAAG GCTGTTGATT ACATTGTGAG CTGCAAAAAC CTGGATGGTG GTTTCGGGTG CACACCTGGA GCGGAGTCTC ATGCAGGACA GATTTTCTGT TGCGTGGGTG CTCTTGCTAT CACCGGGAAT CTCCATCATG TTGATAAGGA CTTACTTGGA TGGTGGTTAT GTGAAAGACA AGACTACGAG TCTGGAGGTT TAAATGGACG ACCTGAGAAA CTCCCTGATG TTTGCTATTC TTGGTGGGTG TTATCCAGCT TAATCATGAT CGATAGAGTT CATTGGATCG AGAAAGGAAA GCTTGTCAAG TTCATCTTGG ACTGTCAGGA CATGGATAAC GGAGGTATCT CAGATAATCC CAAAGATGCT GTTGATATCT TCCACACCTA CTTTGGAGTT GCGGGGCTCT CTCTTCTCGA GTATCCTGGA GTCAAACCAA TTGATCCTGC CTACGCTTTG CCTGTCCATG TCATCAACCG GATTCTCTTC ACCAAATGA 
Length909
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4604508.. 4606168
Download Sequence
A.thaliana
AGI-codeAT3G12070.1
DescriptionRAB geranylgeranyl transferase beta subunit 2
TAIR curator summary
Alias[AtRGTB2][RGTB2][RAB geranylgeranyl transferase beta subunit 2]
Gene coexpression
MR
MR Locus Description
8 Ahg911245
20.3961 Ahg906686
25.2785 Ahg311464 Cysteine proteinases superfamily protein
26.9444 Ahg923362
28.931 Ahg359589 Protein of Unknown Function (DUF239)
29.1548 Ahg914797
46.2061 Ahg334742
47.0319 Ahg470343 Cystatin/monellin superfamily protein
57.9483 Ahg322090 Protein of Unknown Function (DUF239)
58.983 Virus0426
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression