| Annotation |
|---|
| Description | jgi|Araly1|318019|fgenesh1_pm.C_scaffold_3001035 |
| Sequence |
ATGCCTTCAA AAAAAGAATA CCATAAAACA TTGAACAAAA TGAAGACTAA TCTTTTTCCC TTCCTCATCT TCTCACTTCT CTTATCATTT TCCTCGGCCG AGCAATGTGG TCGCCAAGCC GAAGGAGCCC TTTGCCCCAA CGGTCTATGC TGCAGCAAGT ACGGATGGTG CGGTAACACC GAACCCTACT GTAAGCAGCC TGGCTGCCAA AGCCAGTGCA CTCCCGGCGG TACTCCTGGA CCCACCGGCG ACCTTTCGGG CATCATTTCA AGTTCTCAGT TCGATGATAT GCTTAAGCAT AGGAATGATG CTGCTTGTCC TGCTAGAGGT TTCTACACTT ACGACGCCTT TATCACCGCT GCAAAGTCCT TCCCTGGTTT TGGCACCACC GGAGACACCG CCACGAGGAA GAAGGAGGTT GCCGCCTTCT TCGGCCAGAC TTCCCATGAA ACCACAGGTG GGTGGGCTTC AGCACCAGAC GGACCATTTT CATGGGGCTA CTGTTTCAAG CAAGAACAGA ATCCTGGTTC AGACTACTGT GAACCAAGCG CCACGTGGCC ATGCGCATCT GGCAAACGCT ACTATGGAAG AGGACCGATG CAGCTGACGT GGAACTACAA TTACGGTCCA TGCGGTAGAG ACATAGGAGT TGACTTACTC AACAACCCCG ACCTCGTGGC CAACGACGCA GTGATCTCTT TCAAATCCGC GATTTGGTTC TGGATGACTG CTCAGCCTCC CAAACCGTCG TGCCACGCCG TGATAGCCGG CCAATGGCAG CCGTCAGACG CCGACCGTGC AGCCGGGAGA TTACCAGGTT ACGGAGTGAT TACGAACATC ATTAACGGTG GATTGGAATG CGGACGTGGC CAAGACGGGA GAGTCGCGGA TCGTATAGGG TTTTATCAGA GGTATTGTAA CATATTTGGG GTTAATCCTG GTGGTAATCT TGATTGTTAC AACCAAAGAT CCTTTGGTAA CGGCCTCCTC AACGCTGCTA TCTAA |
| Length | 1005 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4730033.. 4731241 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G12500.1 |
| Description | basic chitinase |
| TAIR curator summary | encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. |
| Alias | [ATHCHIB][B-CHI][CHI-B][HCHIB][PR-3][PR3][basic chitinase][PATHOGENESIS-RELATED 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg894377 | myrosinase-binding protein 2 |
| 7.48331 |
Ahg894395 | myrosinase-binding protein 2 |
| 8.66025 |
Ahg479866 | alpha/beta-Hydrolases superfamily protein |
| 9.94987 |
Ahg889207 | HAD superfamily, subfamily IIIB acid phosphatase |
| 10.583 |
Ahg941993 | 6-phosphogluconolactonase 5 |
| 13.0767 |
Ahg491894 | L-tyrosine decarboxylase |
| 13.4164 |
Ahg490335 | Protein of unknown function, DUF538 |
| 16.1245 |
Ahg316945 | Lactoylglutathione lyase / glyoxalase I family protein |
| 16.3095 |
Ahg912172 | |
| 16.6132 |
Ahg931993 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
|
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