Detail


ID : Ahg318289

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318289|fgenesh1_pm.C_scaffold_3001305
Sequence
ATGGCGTCCG CATTCTCTGC ATTTAGGGTT TCATTGTCCA GAATCAGTCC TTTCCGTGAT ACTCGGTTCT CTTATCCCGC CACGTTCGCT TTAGCTCATA CCAAACGAAT CATGTGCAGC TCTCCACATT CTGTATCTTC ATCTCCTTCT CCCTCTGACA TTTCTTCTTC TTCTTCTTCT TCTCCGTCTA CTTTTTCGTT AATGGGAGCA AGTGAAAATG CAAGGTGGAG ACCGATGTGC TTGTATTACA CTCACGGGAA ATGTACAAAG ATGGATGATC CTGCCCATTT GGAAATTTTC AACCATGATT GTTCCAAGGA ACTTCCAGTG GCTGCTACTG ATCTTGAGAG AAAGAAGTCA CAAGAATTCA ACTTTTTCTT GGTTATTGAC TTGGAAGGAA AAGTTGAGAT TCTTGAGTTT CCTGTTTTGA TCGTAGATGC CAAAACCATG GAAGTCGTAG ACTTGTTCCA CAGGTTTGTA AGACCCACCA AAATGAGCGA GCAAGCAATT AACAAATACA TTGAAGGCAA GTATGGGGAA GTCGGTGTTG ATCGTGTATG GCATGACACA GCTATTCCAT TTAAGCAAGT TGTTGAGGAA TTTGAAGCTT GGTTAGCTGA ACATGACTTG TGGACTAAAG ATACAGATGG GGCTCTGAAC GATGCAGCTT TTATAACCTG TGGAAACTGG GATATAAAGA CGAAGATTCC TGAGCAATGC ATAGTTTCAA ATATCAATCT TCCGCCATAT TTTACGGAGT GGATCAATCT CAAAGACATC TACTTGAATT TCTATGGCCG TGAGGCCAGA GGAATGGTGT CAATGATGAG GCAGTGTGGA ATAAAACTCA TGGGAAGTCA CCATCTGGGT ATTGATGACA CAAAGAACAT CACGAGGGTG GTGCAACGGA TGCTCTCAGA AGGTGCAGTT CTCAAGATCA CAGCTCGAAG GAGCAAATCC AACATGAGAA ACGTCGAGTT TCTGTTCAAG AACAGGATTA AGCCCATGAA TTGGCCCAAT CTCGGCTGTA ATCGCCTGTG TGCTGGTTCA TCAGAAAGTC AAACAGCAAC TTTGTGTCTT TGTTCATTTT GTCAGCACCT TCTTCACTCG CCGACTGAGG AAGACTCTCA TGTGCTCGAA AATTGCTATG TGCTTGAGTT TATAATATTC ACAAACTCGA ATTTTAGACT CTCTGGATCG GGTTTGAATT TGATTACGAG CAACTATCTT ATCGATATGT ACTGTAAATG CAGAGAACAG TTGATAGCTT ATAAGGTGTT CGACAGTATG CCTGAGAGAA ATGTTGTTTC ATGGACGGCT CTAATGAGCG GTCATGTACT TAATGGTGAC CTTAACGGGT CCTTATCTCT TTTCACTGAA ATGGGGCGTC AGGGTATTTA CCCAAACGAG TTTACTTTCT CGACGAATCT AAAAGCTTGT GGTTTGCTTA ATGCGCTAGA GAAGGGGTTG CAGATTCATG GGTTTTGTTT GAAGATTGGT TTTGAAATGA TGGTTGAGGT GGGTAATTCT TTGCTTGACA TGTATTCAAA ATGTGGAAGA GTCAATGAAG CTGAGAAAGT GTTTCGTTGG ATGGTGGGTA GGAGTCTGAT AAGCTGGAAC GCGATGATAG CTGGATATGT ACATGCGGGT TATGGTAGTA GAGCTTTGGC TACGTTTGGG ATGATGCAAG AGGCAAAGAT AAAGGAAAGG CCAGACGAGT TCACTTTGAC TAGCTTGTTG AAGGCTTGCA GTAGCACTGG TATGATTTAT GCAGGAAAAC AGATTCATGG TTTTCTAGTT AGGAGTGGGT TCCATTGTCC AAGTTCCGCA ACCATCACTG GTTCTCTTGT CGATTTGTAT GTCAAGTGTG GAAATCTCTT TAGTGCTCGG AAAGCTTTTG ATCAAATCAA GGAAAAGACA ATGATCTCAT GGAGTTCATT GATTCTTGGA TATGCTCAAG AGGGTGACTT CGTGGGGGCG ATGGGTTTGT TTAAGCGACT ACAGGAGCTA AGCTCTCAGA TTGACAGTTT TGTTCTTTCT AGCATCATTG GAGTCTTTGC TGATTTTGCC CTCTTGCAGC AAGGGAAGCA AATGCAAGCA CTCGTTGTGA AACTTCCATC TGGGTTAGAA ACATCTGTTT CGAATTCACT GGTGGACATG TATCTCAAGT GTGGATTAGT TGATGAGGCT GAGAAATGTT TCGCCGAAAT GCAGTCGAAA GATGTGATCT CCTGGACTGT AATGATCACT GGCTACGGGA AGCACGGGCT TGGCAAAAAA GCTGTTAGTA TTTTTAACAA AATGTTGAGA CATAACATTG AGCCTGATGA GGTATGCTAT TTAGCTGTAC TTTCTGCTTG TAGCCATTCT GGTATGATCA AAGAAGGTGA AGAACTTTTT TCAAAGTTAC TAGAGACACA GGGAATCAAA CCTAGGGTAG AACACTACGC ATGTGTAGTT GATCTACTAG GACGAGCTGG TCGTTTGAAG GAAGCTAAAC ATCTGATTGA CACAATGCCG ATTAAACCAA ATGTCGGAAT ATGGCAAACA CTTCTTAGCC TCTGTCGAGT ACATGGGGAC ATCGAATTAG GGAAAGAAGT GGGTAAGATT CTTTTGAGGA TAGATGGAAA GAATCCTGCA AATTACGTGA TGATGTCCAA CCTATATGGG CAAGCCGGTT ATTGGAACGA ACAAGGGAAC GCACGAGAGC TTGGGAGTAT AAAAGGGTTG CAGAAAGAAG CTGGTATGAG CTGGGTCGAG ATTGAGAGAG AGGTACATTT CTTCCGTAGT GGAGAGGATT CACATCCTCT GACACTTGTA ATCCAAGAAA CTTTGAAAGA AGTTGAAAGA AGACTGAGAG AAGAATTGGG ATATGTTTAC GGCCTGAAAC ATGAGCTGCA TGATATAGAC GATGAGTCAA AGGAGGAGAA CCTTAGAGCT CACAGTGAAA AGCTAGCAAT TGGTCTGGCA TTGGCAACAG GCGGGTTAAA CCAGAAAGGA AAGACAATAA GAGTGTTCAA GAACTTGAGG GTATGCGTAG ATTGTCATGA GTTCATCAAG GGGCTGTCTA AAATCACGAA GATAGCGTAC GTTGTGAGAG ATGCTGTTCG GTTTCACAGT TTTGAAGATG GTTGTTGTTC CTGTGGAGAT TACTGCTTCT TCATTGACGA GCAAGAGAAA GTCGCTGTGG TTTTCGATGT AGACGGGTAT CGAGACACTG AGACCGCTCG GTACCACACA GCTTTTATCA TTGGAGACGA CGGCTACTTC AAATCCGTGA GTCTGGGAGA AGCTCCCAAT GTCTATGACG GGAAACCTGG CCATTTGAGA TATACTCCAC AATTTTATTG TCCCCCACTT GTGTGCTCTT CTTCTTATCT CCCAAGTTTT GTTAGTCACT CATGA
Length3405
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5989237.. 5995223
Download Sequence
A.thaliana
AGI-codeAT3G15130.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.0905 Ahg343169 endonucleases
11.9583 Ahg353559
16.9706 Ahg929776 Mitochondrial transcription termination factor family protein
23.1948 Ahg935902 response regulator 14
29.6648 Ahg476275 tubulin folding cofactor E / Pfifferling (PFI)
32.8329 Ahg941887 calmodulin-like domain protein kinase 9
37.3095 Ahg940982 Tetratricopeptide repeat (TPR)-like superfamily protein
44.3959 Ahg485634 Zn-dependent exopeptidases superfamily protein
45.6727 Ahg915111 Ribosomal protein L13 family protein
49 Ahg941374 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression