Detail



ID : Ahg318572

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318572|fgenesh1_pm.C_scaffold_3001588
Sequence
ATGGCGGCTA CGAAAGCTCT GGGATTTGTT TTGCCGACGG GATTATTTAT ACAGCCGTCG TTGAACCGTC GCGGAGGAGT TAGGGTCTCC GTCTTCCAGT GTTCCGTTTC TTCACTCACC TCTACAGGCA CCGATTTCCC CATTTCCTTA TTTGCACTCT CATACAATGC TAGGCTTGTG TTAGAAGATG GCTCTGTGTG GTCGGCTAAG TCTTTTGGTG CTTCTGGAAC CCGTGTTGCT GAATTGGTTT TTAACACCTC TTTGACAGGG TATCAAGAGA TTCTGACGAG TCCCAGGCTA AGAAGTTATG CTGGACAATT TGTGCTAATG ACAAATCCTC AGATCGGTAA CACCGGTGTC AATCCCGATG ATGAAGAATC AAGGCAATGT TTTTTGGCTG GTTTGGTGAT AAGAAGTCTT AGCATCAGTA CCTCAAACTG GAGATGTATG ATTACACTTG GTGACTATCT AGCAGAGAGG AACATTATGG GAATCTATGA TCTTGACACA CGGGCAATAA CCCGTCGATT AAGAGAAAGC GGCAGTCTTA ACGGTGTGCT TAGCACTGAT GGATCTAAAA CCGACGAGGA ACTTTTGCAT ATGTCCCGCT CTTGGGATAT CGTAGGCCTT GATCTAATAA GCAATGTTTC GTGTAAATCT CCCTACGAAT GGGTTGAAAA AACAAATCCT GAATGGGAGT TTAACACAAC CTCCTCACAT CACAAAGAAT CCTACAGAGT TATTGCATAT GATTTCGGGA TCAAGCAAAA CATCCTAAGA CGCTTGGCAT CATACGGCTG TGAAATCACG GTTGTCCCAT CAACATGGCC AGCTGCAGAG GCACTTGAAA TGAATCCAGA TGGAATTCTT TTCAGCAACG GTCCAGGAGA TCCTTCTGCA GTGCCTTATG CAGTTGAAAC GGTTAAAGAG CTTCTAGGAA AAGTTCCTGT CTATGGAATC TGTATGGGTC ATCAGTTACT TGGACAAGCT CTTGGAGGTA AAACCTATAA GATGAAGTTT GGTCATCATG GAGGAAACCA TCCAGTTTGT AACAACAGAA CCGGCCATGT CGAGATCAGT GCTCAGAACC ATAACTATGC AGTAGACCCA GCTTCTCTCC CCTCCGGTGT CGAAGTGACT CATGTCAATC TCAACGATGG AAGTTGCGCT GGTCTCTCTT TTCCGGCAAT GAATGTCATG TCTCTTCAGT ATCACCCTGA GGCTTCTCCT GGACCTCATG ACTCCGATAA CGCATTTGGA GAGTTTGTGG AGCTCATGAA AAGATTTAAA CAGAGCACTT GA 
Length1302
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7301484.. 7306463
Download Sequence
A.thaliana
AGI-codeAT3G27740.1
Descriptioncarbamoyl phosphate synthetase A
TAIR curator summarycarbamoyl phosphate synthetase small subunit mRNA (carA),
Alias[CARA][VEN6][carbamoyl phosphate synthetase A][VENOSA 6]
Gene coexpression
MR
MR Locus Description
18.7083 Ahg336541 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
33.2716 Ahg316562 RING/U-box superfamily protein
47.7912 Ahg471720
64.8074 Ahg938710 Nucleoporin interacting component (Nup93/Nic96-like) family protein
72.5879 Ahg324413
77.6273 Ahg899275 Pentatricopeptide repeat (PPR) superfamily protein
77.6917 Ahg938840 nucleic acid binding;methyltransferases
80.697 Ahg322664 cell division cycle 48B
91.433 Ahg480853 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression